DY263046

Overview
NameDY263046
Unique NameDY263046
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1250
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: HAT2_YARLI (Histone acetyltransferase type B subunit 2 OS=Yarrowia lipolytica GN=HAT2 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.059e-44
Identity = 92/302 (30.46%), Postives = 156/302 (51.66%), Query Frame = 2
Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG--GKNENPVIPK-----------VEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD---KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT--NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAEDDCAVT 898
            + EE+ +WKKN+P+LY+++++  ++ P+LTV W+P      +  P     + + G+H+S    +++ +A   LPT      +G   + E     K           + I Q I  DGEVN AR  P     +     + ++++FD        +++  P   LK H KEG+GL+W+      LVSG+ D+ +  W +   A D   K +    VY  H++ V DV +  K + L GSA DDC L +WD R   N+    +K   + +N L FNP++E+++AT S+D TV ++D+ + D  ++
Sbjct:   44 INEEYKIWKKNSPYLYNVVIATVMDHPTLTVEWLPDLFDDIT--PGSMSARLMFGSHSSGLDKDYIHVASVELPTHLRPETIGLLSQQEGGTDMKQHHDAHGRHKRIAIVQSIYEDGEVNVARYNPLASKQIAAAHVTGDIHIFD-RNNIMNSKEEAKPIYNLKHHTKEGWGLNWNINHADQLVSGAIDSTVAFWKIPEAASDGSCKDVTPHTVYH-HDAAVNDVKFSYKMDFLIGSASDDCTLRLWDTRKPGNKAACTIK-ESRGINSLDFNPHSEFLVATGSADETVKVWDMRKMDTPIS 340          

HSP 2 Score: 51.9878 bits (123), Expect = 1.059e-44
Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 3
Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRI-GDKQLELNAEGGP 1055
            RKM  P+  L SH +EV +V+W P+  +VLAS   +R ++VW++ R+  D   + N EG P
Sbjct:  333 RKMDTPISQLYSHCDEVTKVQWCPHQPSVLASGGHDRAILVWDIARLHDDLSSDENDEGPP 393          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: HAT2_CANAL (Histone acetyltransferase type B subunit 2 OS=Candida albicans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.546e-43
Identity = 88/285 (30.88%), Postives = 143/285 (50.18%), Query Frame = 2
Query:   23 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKE-VNYLSFNPYNEWVLATASSDTTVALFDI 874
            EQ      ++EE+ +W+KN  ++Y+ +    L WPSLT+ W+P+    Y+        K +LGTHTS    N L +A   L    ++ NV   +      K++  QK+  + E+ RAR MPQ  N+V T     EV +++     E +     P      H K GYGLSW+P ++G LV+G+ DN +C+ D +        D        + +V DV WH  N NLF S  +D  + ++D R N+   +  A     +N L+F+P+ E ++A  ++ + + L D+
Sbjct:    3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPN----YTTTNGLIDAKLLLGTHTSNQSANQLKVASTQL---SADPNVKANS------KIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNL--DTETRYSHFAP------HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSD------IQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDL 260          

HSP 2 Score: 53.9138 bits (128), Expect = 2.546e-43
Identity = 18/53 (33.96%), Postives = 40/53 (75.47%), Query Frame = 3
Query:  894 LHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGG 1052
            LH +  H+E +  +E+ P+H+ +LA+ + +RR+++W+L+++G++Q + +AE G
Sbjct:  270 LHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDG 322          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: PRW1_SCHPO (RbAp48-related WD40 repeat-containing protein prw1 OS=Schizosaccharomyces pombe GN=prw1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.980e-41
Identity = 92/304 (30.26%), Postives = 150/304 (49.34%), Query Frame = 2
Query:    5 RTMAAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLM-IADAVLP----TKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTS-SCEVYVFD---CAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-EAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR----TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            +  A+EE       + EE+ +WKKN+PFLYDLI++  LEWP +++ W P   Q   A+  +   K  LG     D   +L+ +A   LP    T    +  G    +    +V I+        V  A+ MPQ  + V T  +   +V VFD       +   +    P  RL  H +    + W+   +G LVSGS D  +  WD++A  +      + V+  +HE  V DV +H K+++L  S   D  L + D+R    + +  + V AH   ++ ++FNP+N+++LAT S+D T+AL+D+
Sbjct:   12 QAQASEEGINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE--QQIFAEHGYTEQKMFLGVRA--DVGKYLLAVASIQLPYLNQTVPPTTMEGASAGDESSLRVNISNLYSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDL 311          

HSP 2 Score: 52.373 bits (124), Expect = 1.980e-41
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 3
Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGP 1055
            R +   LH L  H + V ++ + P+ E +LAS++ +RR +VW+L RIG+ Q    A+ GP
Sbjct:  312 RNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGP 371          

HSP 3 Score: 23.0978 bits (48), Expect = 1.980e-41
Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1
Query: 1045 KEGLPEPLFLQGGHRAPNI 1101
            ++G PE LF+ GGH +  I
Sbjct:  368 QDGPPELLFMHGGHTSCTI 386          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: MSI4_ARATH (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 4.745e-35
Identity = 97/308 (31.49%), Postives = 147/308 (47.73%), Query Frame = 2
Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIA--DAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQ----DDCDPDLRLKGH-DKEGYGLSWSPFKEGYLVSGSHDNKICLWDV---------------SALAQ-----DK----VIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR--TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 871
            V+E+++ WK   P LYD + +H L WPSL+  W P   Q    +      +  L   T    PN L+IA  + V P   +  ++   NE    P V+  + I   GEVNR R +PQ   +V T T S +V ++D   Q  +       +  PDL L GH D   + L+  P  E +++SG  D  + LW +               S + Q     DK     +    VY  HE  VEDV++   +   F S GDD  L++WD R  TN   +  KAH+ +++ + +NP+++ ++ T S+D TV LFD
Sbjct:   64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR----QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCP-TEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFD 366          

HSP 2 Score: 34.6538 bits (78), Expect = 4.745e-35
Identity = 17/55 (30.91%), Postives = 27/55 (49.09%), Query Frame = 3
Query:  876 RKMTV-----PLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDK 1025
            RK+T      P++    H   V  V+W P   +V  SSA++  L +W+  R+  K
Sbjct:  368 RKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKK 422          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 6.903e-35
Identity = 88/291 (30.24%), Postives = 151/291 (51.89%), Query Frame = 2
Query:   41 DQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPT------------KDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            +Q+ E+   WKKN+  LY+L+++  L WPSL++ W+ +       +     ++ +LGTH +E  PNFL +AD  LP              +    +GG +      K +I+Q+I  +G+VNR R MPQ PN++ T +S    Y+FD  K      ++  P++ L GH KEG+GLSW+  +   LV+ ++D+KI  WD++  ++D + +  +  +   +S V DV +H  + NL+ +  D+    I D R  QT  +       +  +  NP +   L    S+  + L+D+
Sbjct:   18 NQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMES--ITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSC-KFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFLPNISLIGHKKEGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQQTCSKTVKASNPLFSVRHNP-SIATLFALGSEQDLQLWDL 304          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 4.474e-34
Identity = 95/313 (30.35%), Postives = 147/313 (46.96%), Query Frame = 2
Query:    5 RTMAAEEQDASLD----QVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG-KNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAEDDCAVTHFK*SHRRSV 928
            RT  ++ +D + D     VEEE+ +W  N P +Y+ +    L WPSLT+ W+PS       D        + GTHT+ +  N+L +A   LP   +  + G  ++E        IA K     EV RAR MP   N++ T      + +FD   +  K Q        L  H + GYGL+++P   G L+SGS D  + LWD+ A  + K      +  +H+ +V DV WH    N+FG+  +D  L + D R      +        N LSF+ ++  +LA A  D+ + L+D+  D  +  H    H+ SV
Sbjct:   26 RTKMSDYEDDNTDVQSLTVEEEYELWNSNVPVMYEFVSETKLTWPSLTIQWLPS-------DGQSPEQSLIFGTHTAGEEVNYLKVATINLPAGIAGLDQGDEEDEANDHSSFAIANKFPHIEEVIRARYMPANSNIIATINGKGTISIFDRTLEESKAQVS-----TLAFHKENGYGLAFNPHISGELLSGSDDTTVALWDIEAAKKPK-----SILTSHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVRLEPVKKLPTASPFNTLSFSKHSRNLLAAAGVDSQIYLYDM-RDMSSPLHVMSGHQDSV 320          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: MSI5_ARATH (WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana GN=MSI5 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.256e-33
Identity = 91/313 (29.07%), Postives = 144/313 (46.01%), Query Frame = 2
Query:   26 QDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQ----QDDCDPDLRLKGH-DKEGYGLSWSPFKEGYLVSGSHDNKICLWDV--------------------SALAQDKV----IDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR--TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 871
            Q +    V++ ++ WK   P LYD  V+H L WPSL+  W P   Q  S        +  L   T+   PN L+IA+     +         NE    P V+  + I   GEVNR R +PQ   +V T T S ++ +++   Q ++       D  PDL L GH D   + L+  P  E +++SG  D  + LW++                    +    DK     +    +Y  H+  VEDV++   +   F S GDD  LM+WD R  T+   +  KAH+ +++ + +NP++  ++ T S+D TV +FD
Sbjct:   47 QQSQKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGS-----KTQRLYLSEQTNGSVPNTLVIANCETVNRQ-------LNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP-TEPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFD 346          

HSP 2 Score: 36.1946 bits (82), Expect = 3.256e-33
Identity = 15/45 (33.33%), Postives = 24/45 (53.33%), Query Frame = 3
Query:  891 PLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDK 1025
            P++    H   V  V+W P   +V  SSA++  L +W+  R+G K
Sbjct:  358 PVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKK 402          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: GRWD1_DICDI (Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium discoideum GN=grwd1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.553e-25
Identity = 86/316 (27.22%), Postives = 143/316 (45.25%), Query Frame = 2
Query:   32 ASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPN--FLMIADAVLPTK--------------DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDC------DPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDIA--EDDCAVTHFK 907
            A +D +EE+  +   +T   YD++ S  +EWP L+ H +              ++  V GT   E   N   +M A  +  TK              D ES+     +  V P++++A  I  +G VNR R M Q+ N+V T + +  VY+++ A   +   ++        P   +  H  EGY L WSP   G L +G  +N I + + S         A   ++ H   VED+ W    E +F S   D  + IWD+R  +    VKAH  +VN +S++   E++L +   D +  ++D+   +D+  V+ FK
Sbjct:   74 AGVDPLEEDEVLDYDSTA--YDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMY-LVAGTQADEAKNNKVIIMKAKQLHKTKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPELQLAF-INHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQA---FKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFK 382          

HSP 2 Score: 34.6538 bits (78), Expect = 1.553e-25
Identity = 14/55 (25.45%), Postives = 27/55 (49.09%), Query Frame = 3
Query:  891 PLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGP 1055
            P+     HT  +  +EW+PY E+ +  S+ + ++ +W+     D +   NA   P
Sbjct:  377 PVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANP 431          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: MSI1_YEAST (Chromatin assembly factor 1 subunit p50 OS=Saccharomyces cerevisiae GN=MSI1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.464e-22
Identity = 85/314 (27.07%), Postives = 144/314 (45.86%), Query Frame = 2
Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPT----KDSESN------VGGKNENPV-IPKVEIAQKIRV---DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAE---KQQDDCDP-DLRLKGHD----------------KEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHV-YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT--NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            ++E ++ WKKNT  LYD + ++  +WPSLT  + P        D T   H+ +L + TS   P    I  + + T    K S  N      +  K EN    P   +   I +   +GE NRAR +PQ P+++   +S   +Y+FD  K      +Q     P + +L G                   E   L+W+  +E  L+S   + ++ +WD+   + ++ +ID   V   +  + V DV+W   +++LF +  +   + + DLRT   + Q   + H+  VN   FN  N  +LA+A S+  + L+DI
Sbjct:   19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFP------DLDTTSDEHRILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWDI 326          

HSP 2 Score: 26.1794 bits (56), Expect = 5.464e-22
Identity = 12/32 (37.50%), Postives = 19/32 (59.38%), Query Frame = 3
Query:  912 HTEEVFRVEWDPYHETVLASSADERRLM-VWE 1004
            H   V  +EW P  +TVLA++  E  L+ +W+
Sbjct:  339 HGTSVSTLEWSPNFDTVLATAGQEDGLVKLWD 370          
BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: PEX7_DICDI (Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum GN=pex7 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.269e-16
Identity = 38/132 (28.79%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  503 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAEDDCAVT 898
            H KE Y + W+   +   ++GS D  I +W+       ++  ++  +  H   +    W  +N +LF S   D  L IWD R N++   +KAH+ E+    +N YN+  + T S D T+ ++DI   D   T
Sbjct:  103 HTKEVYSVDWNLVTKDTFITGSWDQSIKIWN------PRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTT 228          

HSP 2 Score: 33.113 bits (74), Expect = 1.269e-16
Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 3
Query:  891 PLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGD 1022
            P  IL  HT  V R++  P+ E++LAS + +  ++VW+  R  D
Sbjct:  226 PTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQD 269          
The following BLAST results are available for this feature:
BLAST of DY263046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
HAT2_YARLI1.059e-4430.46Histone acetyltransferase type B subunit 2 OS=Yarr... [more]
HAT2_CANAL2.546e-4330.88Histone acetyltransferase type B subunit 2 OS=Cand... [more]
PRW1_SCHPO1.980e-4130.26RbAp48-related WD40 repeat-containing protein prw1... [more]
MSI4_ARATH4.745e-3531.49WD-40 repeat-containing protein MSI4 OS=Arabidopsi... [more]
YEC6_SCHPO6.903e-3530.24Uncharacterized WD repeat-containing protein C25H1... [more]
HAT2_ASHGO4.474e-3430.35Histone acetyltransferase type B subunit 2 OS=Ashb... [more]
MSI5_ARATH3.256e-3329.07WD-40 repeat-containing protein MSI5 OS=Arabidopsi... [more]
GRWD1_DICDI1.553e-2527.22Glutamate-rich WD repeat-containing protein 1 OS=D... [more]
MSI1_YEAST5.464e-2227.07Chromatin assembly factor 1 subunit p50 OS=Sacchar... [more]
PEX7_DICDI1.269e-1628.79Peroxisomal targeting signal 2 receptor OS=Dictyos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10CF10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263046 ID=DY263046; Name=DY263046; organism=Citrus clementina; type=EST; length=1250bp
CGGACGAACAATGGCAGCAGAGGAGCAAGACGCGAGCTTGGATCAAGTGG
AGGAGGAGTTCACGGTATGGAAGAAGAACACGCCGTTTTTGTACGATCTG
ATTGTCTCTCACCCGTTAGAGTGGCCCTCGCTTACCGTCCACTGGGTCCC
ATCGCCTCCGCAACCCTACTCAGCGGACCCCACTTTCGCGGTGCACAAGT
TCGTGCTCGGGACCCACACCTCCGAGGATTTTCCCAACTTTCTCATGATC
GCCGATGCCGTGCTGCCCACCAAAGACTCGGAGTCTAACGTCGGCGGCAA
AAATGAAAATCCTGTCATCCCCAAGGTGGAGATAGCGCAGAAGATACGTG
TTGATGGGGAAGTGAATAGAGCACGGTGTATGCCACAGAAACCCAATCTT
GTTGGTACAAAGACTAGCAGTTGTGAGGTGTATGTGTTTGACTGTGCCAA
ACAGGCAGAAAAGCAGCAAGATGATTGTGATCCTGATCTGAGGTTGAAGG
GTCATGATAAAGAGGGTTATGGATTGTCTTGGAGTCCCTTTAAGGAAGGT
TATCTTGTGAGTGGTTCCCATGACAATAAGATTTGCTTGTGGGATGTGTC
TGCGTTGGCTCAAGACAAAGTGATTGATGCAATGCATGTCTATGAGGCTC
ATGAAAGTGTGGTTGAAGATGTGTCGTGGCATTTGAAGAATGAGAATTTA
TTTGGGTCTGCAGGCGATGATTGCCAACTGATGATCTGGGACTTGCGCAC
TAATCAAACTCAACAGCGTGTAAAAGCTCATGAGAAAGAGGTTAACTATC
TATCTTTTAATCCATACAATGAATGGGTTCTGGCGACTGCATCTTCAGAC
ACTACTGTTGCTTTGTTTGATATTGCGGAAGATGACTGTGCCGTTACACA
TTTTAAGTAGTCACACAGAAGAAGTGTTCCGGGTTGAATGGGATCCCTAT
CACGAAACCGTGCTGGCTTCTTCAGCTGATGAACGAAGGCTCATGGTTTG
GGAACTTTACCGGATTGGGGACAAGCAGTTGGAATTAAATGCCGAAGGAG
GGCCTTCCTGAACCCCTTTTCCTCCAGGGAGGTCACAGGGCCCCAAATAT
TAAAATTTCCCTTGAAACAAAAATGACCCGGGGGGGTTCTTTTCAGGTGG
GGCCCAACAAAAAAAACGTGTTCTGGGGCTTGGGGCAAATGGACAAAAAA
AACTTTTATCCGGAAGAACCAAAAAAAAAATTTTTCTCTCCCCCCCCCCC
back to top