DY263050

Overview
NameDY263050
Unique NameDY263050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y1230_STAAN (Uncharacterized hydrolase SA1230 OS=Staphylococcus aureus (strain N315) GN=SA1230 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.577e-15
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLI 662
            ++++   RR +HQ+PEL+  EFET+  ++A LD + I Y  PL +TG+ A++   G   +A RAD+DALPI E  +  Y+S+    MHACGHD H   L+
Sbjct:    4 LEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPL-ETGVIAYLEGNGSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALM 102          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.513e-15
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  384 RRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKI 677
            RR +H +PEL+FQE +T++ +   L     +    P   + +   +G      VA+RADMDALPIQE   +E+ SK  G MHACGHD H AML+G AKI
Sbjct:   21 RRHLHAHPELSFQEEKTAQFVYETLQSFGHLELSRPTKTSVMARLIGQQPGRVVAIRADMDALPIQEENTFEFASKNPGVMHACGHDGHTAMLLGTAKI 119          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.993e-15
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  336 MELARRPETV-DWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGG--PPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            MEL    +T+   L  +RR +H +PEL+ QE++T+  +   L    +  +  + KTG+   +   G  P  +A+R DMDALPI+E V   + S+  G MHACGHD H  + +G A +L    H L
Sbjct:    1 MELKNLAQTLLPRLVEIRRHLHAHPELSGQEYQTAAYVAGVLSSCGLHVEEAIGKTGVVGQLSGKGDDPRLLAIRTDMDALPIEEMVSLPFASRHPGVMHACGHDIHTTLGLGTAMVLSQMGHRL 125          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.827e-15
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAW--VGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKIL 680
            V+W    RR +H +PEL+F+E  T+ ++R  L  + +G +  L   G   W  VG      +ALRAD+DALP+ E     ++S+V G  HACGHDAH  ML+GAA +L
Sbjct:  422 VEW----RRDLHAHPELSFEERRTTGVVRDHL--VGLGLEPVLMPGGTGLWCDVGPETGECIALRADLDALPVAETTGLPFESRVPGVSHACGHDAHTTMLMGAASVL 523          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y1253_STAAB (Uncharacterized hydrolase SAB1253 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1253 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.022e-14
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLI 662
            ++++   RR +HQ+PEL+  EFET+  ++A LD + I Y  PL +TG+ A++       +A RAD+DALPI E  +  Y+S+    MHACGHD H   L+
Sbjct:    4 LEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPL-ETGVIAYLEGNDSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALM 102          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y1513_STAHJ (Uncharacterized hydrolase SH1513 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1513 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.335e-14
Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLI 662
            ++++   RR +HQ+PEL+  EFET++ +   L+ + + Y+ PL +TG  A++       +A RAD+DALPI E  + +Y+S+    MHACGHD H   L+
Sbjct:    4 LEFVTKHRRHLHQHPELSLHEFETTKYITQFLEELGVSYERPL-ETGAIAYLNGNSDHTIAFRADIDALPIFEENDVDYRSQTDNVMHACGHDGHTTALM 102          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y1078_STAES (Uncharacterized hydrolase SE_1078 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1078 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.974e-14
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 3
Query:  384 RRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS 686
            RR +HQ PEL+  EFET+  + + L+ + + Y  PL KTG+ A++       +A RAD+DALPI E  + ++KSK    MHACGHD H   L+   K  K+
Sbjct:   11 RRHLHQYPELSLHEFETTSYITSFLEDLGVPYDRPL-KTGVIAYLEGNSHHTIAFRADIDALPIYEENDIDFKSKNDNVMHACGHDGHTTALMLFVKRCKA 110          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y968_STAEQ (Uncharacterized hydrolase SERP0968 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0968 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.073e-14
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 3
Query:  384 RRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS 686
            RR +HQ PEL+  EFET+  + + L+ + + Y  PL KTG+ A++       +A RAD+DALPI E  + ++KSK    MHACGHD H   L+   K  K+
Sbjct:   11 RRHLHQYPELSLHEFETTSYITSFLEDLGVPYDRPL-KTGVIAYLEGNSHHTIAFRADIDALPIYEENDIDFKSKNDHVMHACGHDGHTTALMLFVKRCKA 110          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: Y1352_STAS1 (Uncharacterized hydrolase SSP1352 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1352 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.626e-14
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS 686
            ++++   RR +H++PEL+  E+ET++ +   LD + + Y+ PL  TG+ A++       +A RAD+DALPI E     Y+S+V   MHACGHD H   L+   K  K+
Sbjct:    4 LEFVTEHRRYLHKHPELSLHEYETTKYIAHFLDDLGVPYERPL-DTGVIAYLSGNSTHTIAYRADIDALPIYEENNVSYRSEVDHVMHACGHDGHTTALMLFVKRCKN 110          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.928e-13
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 3
Query:  378 SVRRTIHQNPELAFQEFETSR-LLRAELDRMEIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ++RR +HQ PEL FQEF+T + LLR      +   +    KTGI   V GT     +  RADMD LPI+E     Y+SK  G+MHACGHD H+++ +G
Sbjct:    9 AIRRDLHQIPELGFQEFKTQQYLLRYIQSLPQERLQVRTWKTGIFVKVNGTSPRKTIGYRADMDGLPIREETGLPYRSKHEGRMHACGHDVHMSIALG 106          
The following BLAST results are available for this feature:
BLAST of DY263050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
Y1230_STAAN1.577e-1543.00Uncharacterized hydrolase SA1230 OS=Staphylococcus... [more]
AMAA_BACST3.513e-1545.45N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
Y100_SYNY35.993e-1536.80Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
CAAL4_RHOSR7.827e-1542.59Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
Y1253_STAAB1.022e-1442.00Uncharacterized hydrolase SAB1253 OS=Staphylococcu... [more]
Y1513_STAHJ1.335e-1439.00Uncharacterized hydrolase SH1513 OS=Staphylococcus... [more]
Y1078_STAES2.974e-1442.57Uncharacterized hydrolase SE_1078 OS=Staphylococcu... [more]
Y968_STAEQ5.073e-1442.57Uncharacterized hydrolase SERP0968 OS=Staphylococc... [more]
Y1352_STAS16.626e-1437.96Uncharacterized hydrolase SSP1352 OS=Staphylococcu... [more]
DAPL_GEOKA1.928e-1344.90Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263050 ID=DY263050; Name=DY263050; organism=Citrus clementina; type=EST; length=1240bp
ATTATTTCTCTCTCTCTCTGGGTGTGTTCCTTCTCCATTTGTTTTTTTTC
ACTCTCATCACTTTCTCTGCAAACATGAAGCTTCAAAAACTCTCTGTGGC
GTTTAAAATCTTGAGCTTCAATTTAATTATTATTATTCTCCTGCAAGTTG
AATCCTTAACGCCGGCGAACAACGACTACGCTTTCTTTGACATAAACTCG
TTGGGCTCATCAACAATAGCAGCAACAACGCCGGCTTGGAAACCCGACGG
CGGCAGCGTCAAGAACCGATCGTCGACGTCACGGAAGCCGTTTTCGAGCT
GCGGAGTGTGGAGCAGGGCGTGCTCGAAGGAGGTGATGGAGCTGGCGCGG
CGGCCGGAGACGGTGGATTGGCTGAGGAGTGTGAGGAGAACGATTCATCA
GAATCCGGAGCTTGCTTTTCAAGAATTTGAAACCAGCAGGCTCTTGAGGG
CCGAGTTGGATCGGATGGAGATTGGATACAAATACCCGTTGGCCAAAACA
GGTATCCGGGCATGGGTCGGGACAGGCGGACCGCCGTTTGTTGCCCTCAG
AGCTGACATGGATGCACTTCCGATTCAGGAAGCCGTCGAGTGGGAATACA
AAAGCAAAGTGGCTGGCAAAATGCATGCCTGTGGACACGATGCGCACGTT
GCCATGCTCATCGGTGCGGCCAAGATCTTGAAGAGCCGCGAACATCTTTT
AAAGGTTTGAAAAGAAAAAAAAAATTATTAAAAAAAGAAGAAGATAAATG
CCCTTCTTTGTTTGAATTGATGGTTTTTTTTTTTTAACATCATTTTTGTT
TAGTACTTCAGAAGCTTTTTGCACATTGGTTTTCTCTCTGCATGGATGTC
CAATTTGGAGATGAATTATTGCACTTTATGAAATGAAACTAGGGGTGGTG
GCATTAACGTAACTGTTATAGGCAATTGAAAAAGAATAATGTGTGTGTGT
GTAGGAACGGTGGCTTTTCTTTTTTGTTAAAGAACTGAAATTTGTAGGGG
CAGAAAATGCTTCTCAAAAATGTCCGGGGGGGGAAAAAAAAAATGGGGCC
TCTAAATTAAATTTTCATTTTTTAGCCCGCAGGGGGGCCTTCCAAAAAAA
AGGGTTCTTTTTGGTTTGCCAACCCAAAACCTTTCTGGGTCTTTTTTTCA
AATTGCCTTTCCCCTAAAGGGGGGAAAAAGCTTAAAATCCCCATATTGAA
AAAAAGGGGGGGGGGGGTTTTAAATATTTTTTTTTTTTTT
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