DY263050

Overview
NameDY263050
Unique NameDY263050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 4.295e-13
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 3
Query:  372 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSRE 692
            L ++RR +HQ PE+  +E ET   L  E+D+M+  Y +    +TGI  ++ G      +  RAD+D LPIQE V   ++SK  G MHACGHD H+ + +G  K L  ++
Sbjct:    9 LIAIRRQLHQIPEIGLEEKETQAFLLNEIDKMKQPYLQVRTWQTGILVFIEGKNPQKTIGWRADIDGLPIQEEVVSAFQSKRPGFMHACGHDFHMTIGLGVLKELSQQQ 117          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_GEOTN (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.609e-13
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  357 ETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV--------GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ET+    ++RR +H+ PEL FQEF+T + L   +  +      P  +  +R W         GT     +  RAD+D LPI E     Y+S+ AG+MHACGHD H+++ +G
Sbjct:    2 ETISPFVAIRRDLHKIPELGFQEFKTQQYLLNYIQSL------PQERLDVRTWKTGIFVKVSGTAPRKTIGYRADIDGLPISEETGLPYRSEHAGQMHACGHDVHMSIALG 106          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.326e-13
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 3
Query:  372 LRSVRRTIHQNPELAFQEFETSRLLRAEL-----DRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSRE 692
            L++ RR +HQ PE A +EF+T   L  +L     D M I     L    +  + GT     +  R D+DALPIQEA   ++ S+  GKMHACGHD H+ M +G A+     +
Sbjct:    9 LQTFRRELHQIPETALEEFKTHDYLLTKLKSWQQDYMTIKTVEALPTAILVYFQGTNPVRTIGYRTDIDALPIQEATGLDFASQHPGKMHACGHDVHMTMALGLAQYFSQHQ 120          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.250e-12
Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  381 VRRTIHQNPELAFQEFETSRLLRAELDRME-IGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSRE---HLL 701
            +RR  HQ PEL F EF+T +LL   +  ME    +    KT +   V       +A RADMD LPI E   + + SK  G MHACGHD H+ + +G      S E   HLL
Sbjct:    9 IRRAFHQIPELGFNEFKTQKLLLDTISNMEQTRLQIKTWKTAVFVRVEGRQDYTIAYRADMDGLPITEETGYSFASKHEGAMHACGHDFHMTIALGLLDHFASHEPECHLL 119          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 3
Query:  378 SVRRTIHQNPELAFQEFETSRLLRAEL-----DRMEIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ++RR +HQ PEL FQEF+T + +   L     +R++I       +TGI   V GT     +  RADMD LPI E  +  ++S   G+MHACGHD H+A+ +G
Sbjct:    4 NIRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQI----KTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHDMHMAIALG 101          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.202e-12
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  372 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEI-GYKYPLAKTGIRAWVGTGGPPF-VALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKIL 680
            L  +RR +HQ PEL FQEF+T   L   ++ +     +     TGI  +V    P   +  RAD+D LPI E     Y S   G+MHACGHD H+ + +GA + L
Sbjct:    5 LEQIRRDLHQIPELGFQEFKTQAYLLERINEIATENVEIKKWSTGILVYVHGKSPARKIGFRADIDGLPILEQTNLPYASLHEGRMHACGHDLHMTIALGALEKL 109          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.382e-11
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  378 SVRRTIHQNPELAFQEFETSRLLRAEL-----DRMEIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ++RR +H+ PEL FQEF+T + L   +     +R+EI       KTGI   V GT     +  R D+D LPI+E     Y S+  G MHACGHD H+++ +G
Sbjct:    9 AIRRDLHKIPELGFQEFKTQQYLLRYIHALPQERLEI----QTWKTGIFVKVKGTAPRKMIGYRTDIDGLPIKEETGLPYSSEHEGNMHACGHDVHMSIALG 106          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_STRU0 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dapL PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.804e-11
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  372 LRSVRRTIHQNPELAFQEFETSRLLRAELDRM---EIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSRE 692
            L ++RR +HQ PE+  +E++T   L + ++++   +   +    KTGI  ++ G      VA R+DMD LPI E     + SK  G+MHACGHD H+ M +G  + L  ++
Sbjct:    4 LIAIRRQLHQIPEIGLEEYQTQAFLLSVIEQLCQDKPFIQIKTWKTGILVFLKGYAPEKTVAWRSDMDGLPITEETGLAFASKHQGRMHACGHDIHMTMALGLLEALVEKQ 114          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_BACSU (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus subtilis GN=dapL PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.804e-11
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 3
Query:  363 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV--------GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ++ L ++RR +H+ PEL FQEF+T + L   L++      YP  +  I  W         GT     +A RAD+DAL I+E     + S+  G MHACGHD H+ + +G
Sbjct:    3 IEELIAIRRDLHRIPELGFQEFKTQQYLLNVLEQ------YPQDRIEIEKWRTGLFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLHMTIALG 105          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.078e-11
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  378 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIG 665
            ++RR +HQ PE  ++E +T   L   + ++  G+ +    +TGI   V GT     +  R D+DALPI E  E  + SK  G MHACGHD H+++ +G
Sbjct:    7 AIRRELHQIPETGYKELKTQAYLLDYISKLPSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIALG 104          
The following BLAST results are available for this feature:
BLAST of DY263050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
DAPL_ENTFA4.295e-1339.45Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
DAPL_GEOTN5.609e-1336.04Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_LEUCK7.326e-1338.39Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_BACSK1.250e-1240.54Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_ANOFW2.132e-1241.18Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
DAPL_OCEIH6.202e-1239.05Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_GEOSW1.382e-1140.20Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_STRU01.804e-1135.14Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_BACSU1.804e-1136.70Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LISMO3.078e-1137.76Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263050 ID=DY263050; Name=DY263050; organism=Citrus clementina; type=EST; length=1240bp
ATTATTTCTCTCTCTCTCTGGGTGTGTTCCTTCTCCATTTGTTTTTTTTC
ACTCTCATCACTTTCTCTGCAAACATGAAGCTTCAAAAACTCTCTGTGGC
GTTTAAAATCTTGAGCTTCAATTTAATTATTATTATTCTCCTGCAAGTTG
AATCCTTAACGCCGGCGAACAACGACTACGCTTTCTTTGACATAAACTCG
TTGGGCTCATCAACAATAGCAGCAACAACGCCGGCTTGGAAACCCGACGG
CGGCAGCGTCAAGAACCGATCGTCGACGTCACGGAAGCCGTTTTCGAGCT
GCGGAGTGTGGAGCAGGGCGTGCTCGAAGGAGGTGATGGAGCTGGCGCGG
CGGCCGGAGACGGTGGATTGGCTGAGGAGTGTGAGGAGAACGATTCATCA
GAATCCGGAGCTTGCTTTTCAAGAATTTGAAACCAGCAGGCTCTTGAGGG
CCGAGTTGGATCGGATGGAGATTGGATACAAATACCCGTTGGCCAAAACA
GGTATCCGGGCATGGGTCGGGACAGGCGGACCGCCGTTTGTTGCCCTCAG
AGCTGACATGGATGCACTTCCGATTCAGGAAGCCGTCGAGTGGGAATACA
AAAGCAAAGTGGCTGGCAAAATGCATGCCTGTGGACACGATGCGCACGTT
GCCATGCTCATCGGTGCGGCCAAGATCTTGAAGAGCCGCGAACATCTTTT
AAAGGTTTGAAAAGAAAAAAAAAATTATTAAAAAAAGAAGAAGATAAATG
CCCTTCTTTGTTTGAATTGATGGTTTTTTTTTTTTAACATCATTTTTGTT
TAGTACTTCAGAAGCTTTTTGCACATTGGTTTTCTCTCTGCATGGATGTC
CAATTTGGAGATGAATTATTGCACTTTATGAAATGAAACTAGGGGTGGTG
GCATTAACGTAACTGTTATAGGCAATTGAAAAAGAATAATGTGTGTGTGT
GTAGGAACGGTGGCTTTTCTTTTTTGTTAAAGAACTGAAATTTGTAGGGG
CAGAAAATGCTTCTCAAAAATGTCCGGGGGGGGAAAAAAAAAATGGGGCC
TCTAAATTAAATTTTCATTTTTTAGCCCGCAGGGGGGCCTTCCAAAAAAA
AGGGTTCTTTTTGGTTTGCCAACCCAAAACCTTTCTGGGTCTTTTTTTCA
AATTGCCTTTCCCCTAAAGGGGGGAAAAAGCTTAAAATCCCCATATTGAA
AAAAAGGGGGGGGGGGGTTTTAAATATTTTTTTTTTTTTT
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