DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 8.606e-26 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G + + L+VA+++YL+ DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M LLA GTKGKR +PHA+IMI QP + G PA+D+ I+AKE + +++L LL HTG E + + + T E+A+ Sbjct: 26 RIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQG--PATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAK 179
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.270e-25 Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G + + L+VA+++YL+ DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M LLA G KGKR +PHA+IMI QP + G PA+D+ I+AKE + +++L LL HTG E + + + T E+A+ Sbjct: 26 RIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQG--PATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAK 179
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.270e-25 Identity = 62/154 (40.26%), Postives = 96/154 (62.34%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RIVY+G P+ V EL++A+L+YL+ D PI +YINS G G E+ FA+YDT+ ++ + T+ +G A G + LL+AAGTKG+R +P+++I++ QP + G A+D+ IRA+E + + TL +LL HTG + E + K E Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA-------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARG--QATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTE 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.271e-25 Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 R ++IG P+ V LV+A++++L+ DP+ I+LYINS G G+ + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A+IMI QP G A+D+ I A+E + RD L +LL +HTG +E + + E + +A+ Sbjct: 29 RTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG---------GVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQG--QATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAK 182
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_WIGBR (ATP-dependent Clp protease proteolytic subunit OS=Wigglesworthia glossinidia brevipalpis GN=clpP PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 9.515e-25 Identity = 59/154 (38.31%), Postives = 96/154 (62.34%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RI+++ + + L++A++++L+ DP+ I+LYINS G G+ + G +IYDT+ +KCEV T+ +G + MA L+LA+G KGKRF +P+A+IMI QP S G A+D+ I E + + +++LL +HTG S E ++K E Sbjct: 28 RIIFVTGKIEDYMANLIIAQMIFLESEDPEKDIFLYINSPG---------GVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIMIHQPLGGSQG--QATDIAIHTTEILKIKKCMIELLSKHTGQSAEIISKDTE 170
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.243e-24 Identity = 67/185 (36.22%), Postives = 105/185 (56.76%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRVSGVVRELFRAEV 994 RI+++G + V L++A++++L+ DP+ I+LYINS G G+ + G AIYDT+ ++C V T+ VG A M +LLAAG +GKRF +PHA+IMI QP G A+D+ I A+E + R+TL +L HTG + E + E E+A+ G+V ++ + +V Sbjct: 28 RIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG---------GVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGFQG--QATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKKY-------GIVDDIVKRKV 194
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.623e-24 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRVSGVVRELFRAEVAPPK 1006 RI+++G + V L+VA+L++L+ DP+ I YINS G G+ + G A+YDT+ +K +V TV +G A M LLLAAG KGKRF +P+++IMI QP + G ASD+ I+A E + ++ L +L +HTG + + +++ + + ++A+ V EL +AE A K Sbjct: 28 RIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPG---------GVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQG--QASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDELEKAEAAKEK 205
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.120e-24 Identity = 62/166 (37.35%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARN 937 RIV +G P+ V L+VA+L++L+ DP IYLYINS G G + G AIYDT+ +K +V T+ +G A M +LLAAG GKR+ +PH++IMI QP G A+D++I A+E ++ L+ +L +HTG ++ + +E + +A++ Sbjct: 35 RIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------GSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPLGGIQG--QATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKD 189
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_GEOLS (ATP-dependent Clp protease proteolytic subunit OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=clpP PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.768e-24 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARN 937 RIV++G + V +LV+A+L++L+ DP I+LYINS G G+ + G AI+DT+ +K V T+ +G A M +LL AG KGKRF +PHA+IMI QP S G A+D++I+A+E + + L +LL +G E + + E + E+ARN Sbjct: 27 RIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLYINSPG---------GVVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMIHQPSGGSRG--QATDIMIQAEEILRMKRELNRLLADLSGQPVERLEQDTERDFFMSAEEARN 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXD (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus (strain DK 1622) GN=clpP2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.768e-24 Identity = 66/165 (40.00%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G P+ V ++VA+L++L+ DP I LYINS G G + G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP + G A+D+ I+AKE + R + L+ +HTG++ E + K E + E AR Sbjct: 27 RIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQG--QATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDAR 180 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |