DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_SYNFM (ATP-dependent Clp protease proteolytic subunit OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=clpP PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.374e-23 Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G + V +++A+L++L+ DP I+ YINS G G+ + G AIYDT+ +K V T+ +G A MA +LLAAG KGKR+ +PH +IM+ QP G A+DV I+AKE + R+ L +L +HTG E + + + + E+AR Sbjct: 28 RIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG---------GLVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGFQG--QATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQAR 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.794e-23 Identity = 62/165 (37.58%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ + + AV +VA+L++L+ DP IYLYINS G G+ + G +IYDT+ +K +V T+ +G A M LL++GTKGKR+ +PHA+IMI QP + G A+D+ I+AKE + + L ++L ++TG S + + K E + E+A+ Sbjct: 29 RIIMLSGEINDAVASSIVAQLLFLEAEDPDKDIYLYINSPG---------GVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQG--QATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAK 182
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.794e-23 Identity = 64/165 (38.79%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV+IG + L++A+L++L+ DP I YINS G G S G AIYDT+ +K ++ TV +G A M LLAAG KGKRF +P+++IMI QP + G ASD+ I+AKE + +D L ++L HTG E + + + E+A+ Sbjct: 28 RIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPG---------GKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQG--QASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.794e-23 Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+++G + + +VA+++YL D PIYLYINS G G + G AIYDT+ +K EV T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+ I A+E + ++ L + L +G S E + K + + E+A+ RV Sbjct: 31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRV 193
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_DESHY (ATP-dependent Clp protease proteolytic subunit 2 OS=Desulfitobacterium hafniense (strain Y51) GN=clpP2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.794e-23 Identity = 60/166 (36.14%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G P+ V LVVA++++L+ DP+ I+LYINS G G S G AIYDT+ ++ +VHT+ VG A M LL AG KGKR +P+A+I+I QP + G+ A+++ I AK + ++ + ++L + TG + E + + T E+A+ Sbjct: 29 RIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG---------GSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGGGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAK 185
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.344e-23 Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV++G + LV+A+L++L+ DP I+LYINS G G + GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP G A+D+ I A+ + RD L K+L ++TG E + E E A+ Sbjct: 28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQG--QATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.344e-23 Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV++G + LV+A+L++L+ DP I+LYINS G G + GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP G A+D+ I A+ + RD L K+L ++TG E + E E A+ Sbjct: 28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQG--QATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP1_SYMTH (ATP-dependent Clp protease proteolytic subunit 1 OS=Symbiobacterium thermophilum GN=clpP1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.344e-23 Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RIV++G P+ V +V+A+L++L+ DP P+ LYINS G G S G IYD + +K V+T VG A MA LLLAAGT GKR+ +P+A++MI QP L G +D+ I A+EA+ + + ++L +H+G S E + E Sbjct: 29 RIVFLGTPIDDQVANVVIAQLLFLESEDPDKPVNLYINSPG---------GSVSAGLGIYDAMQHIKSPVNTTVVGMAASMAALLLAAGT-GKRYALPNARVMIHQPHLSGVG-GQVTDIEITAREAVKTKQLMAEILAKHSGQSVERILADTE 171
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_PELTS (ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=clpP PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.061e-23 Identity = 60/165 (36.36%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G P+ L++A++++L+ DP+ I YINS G G+ + G AIYDT+ ++ V T+ +G A MA LLLAAG KGKR+ +P+A+I+I QP G A+D+ I AKE + R L ++L +HTG E + + E + ++A+ Sbjct: 28 RIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPG---------GVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQG--QATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.061e-23 Identity = 64/165 (38.79%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI++IG P+ + LV+A+ ++L+ DP+ I+LYINS G G+ + G AIYDT+ +K V T+ +G A M LLAAG GKR+ +P A+IMI QP G A+D+ I AKE + +D L L HTG E +T+ E + E+A+ Sbjct: 29 RIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG---------GVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQG--QATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAK 182 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |