DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_CHLTE (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium tepidum GN=clpP PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.061e-23 Identity = 65/190 (34.21%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRVSGVVRELFRAEVAPPKD 1009 RI+++G P+ V L++A+L++L+ DP+ IY+YINS G G S G IYDT+ ++ ++ TV VG A M LLA+GT GKR +PH++IMI QP + G +D+LI+A+E R L LL +HTG + + E + +A+ G++ ++F AP + Sbjct: 53 RIIFLGSPIDEHVAGLIIAQLIFLESEDPERDIYIYINSPG---------GSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTSGKRASLPHSRIMIHQPSGGAQG--QETDILIQAREIEKIRHLLEDLLAKHTGQEVSRIREDSERDRWMSAVEAKEY-------GLIDQIFEKRPAPKSE 224
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.061e-23 Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+++G + + +VA+++YL D PIYLYINS G G + G AIYDT+ +K EV T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+ I A+E + ++ L + L +G S + + K + + E+A++ RV Sbjct: 31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRV 193
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.061e-23 Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+++G + + +VA+++YL D PIYLYINS G G + G AIYDT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+ I A+E + +D L + TG S E + K + + E+A+N RV Sbjct: 31 RILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPG---------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIHQP-LGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRV 193
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G + V LV+A+L++L+ DP I LYINS G G + G AIYDTL ++ +V T+ VG A M LLAAG KGKR+ +P+A+IMI QP + G A+D+ I A+ M +++L K+L + TG E + K + T ++A+ Sbjct: 29 RIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG---------GSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQG--QATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAK 182
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAHJ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L K+L + TG S E + K + T ++A+ Sbjct: 28 RIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAAW (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MW2) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + K + T E+A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAAT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + K + T E+A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAAS (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MSSA476) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + K + T E+A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAAR (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MRSA252) GN=clpP PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + K + T E+A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAAN (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain N315) GN=clpP PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.998e-23 Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + K + T E+A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |