DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.519e-22 Identity = 63/165 (38.18%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RI+++G P+ V ++A+L++L+ DP+ I LYINS G G S G AIYDT+ +K ++ T A+G A M LLAAGTKGKRF +P+ +I++ QP + GL ASDV I A+E + + L ++L +HTG + + + + I E+A Sbjct: 34 RIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPG---------GSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAV--GGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEA 187
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_GEOTN (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.519e-22 Identity = 62/173 (35.84%), Postives = 97/173 (56.07%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+++G P+ V +V++L++L DP+ I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP + G A+++ I AK + RD L ++L ++TG E + + + T +KA+ RV Sbjct: 28 RIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQG--QATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYGIIDRV 189
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJB (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. GN=clpP1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.519e-22 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS-SGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI++IG P+ ++ +V ++YL DP+ I +YINS G G + G AIYDT+ +K ++ TV VG A M LLAAGTKGKRF +PH++IM+ QP L + G ASD+ IRA+E + + + ++L Q TG E + + +E + +A+ Sbjct: 31 RILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPG---------GSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQG--QASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEAQ 185
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_WOLTR (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=clpP PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.984e-22 Identity = 62/173 (35.84%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+++ P+ + ++VA+L++L+ +P IY+YINS G G+ + G +IYDT+ +K +V T+ +G A M LLLAAGT+GKR+ +PH++IMI QP G A+D+ I A E + + L ++ +HTGNS + + +E E+AR + RV Sbjct: 28 RIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPG---------GVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQG--QATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARRIGLIDRV 189
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.984e-22 Identity = 59/166 (35.54%), Postives = 95/166 (57.23%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARN 937 RI+++G + + L+VA+L++L DP+ IYLYINS G G + G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP + G A+D+ I+A+E + ++ L L +HTG E + + E + ++AR+ Sbjct: 27 RIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------GSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQG--QATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARD 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSW (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp. (strain WCH70) GN=clpP PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.591e-22 Identity = 63/173 (36.42%), Postives = 96/173 (55.49%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+ +G P+ V +V++L++L DP+ I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP + G A+++ I AK + RD L ++L ++TG E + + + T +KA+ RV Sbjct: 28 RIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQG--QATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIIDRV 189
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.591e-22 Identity = 62/164 (37.80%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV++G P+ V +V++L++L DP I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP + G A+++ I AK + RD L ++L ++TG E + + + T +KA Sbjct: 28 RIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPG---------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQG--QATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKA 180
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_EUBE2 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.591e-22 Identity = 59/164 (35.98%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RI+++G + LVVA++++L+ DP I+ YINS G G S GFAIYDT+ +KC+V T+ +G A M LL+ G KGKR +P+A+IMI QP + G +++ I A+ + R+ L ++L +TG S E +++ E T ++A Sbjct: 28 RIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPG---------GSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGARG--QETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEA 180
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_EUBR3 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=clpP PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.384e-22 Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RI+++G + LVVA+L++L+ DP I+LYINS G GM + G AIYDT+ +KC+V T+ +G A M LLA G KGKR+ +P+A+IMI QP + G A+++ I A+ + + L ++L +TG E + E + ++A Sbjct: 28 RIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPG---------GMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKG--QATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEA 180
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.384e-22 Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RI+ +G P+ V +V++L++L DP+ I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP G A+++ I AK + RD L ++L ++TG E + + + T EKA+ RV Sbjct: 28 RIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPG---------GSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQG--QATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRV 189 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |