DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_TROW8 (ATP-dependent Clp protease proteolytic subunit 2 OS=Tropheryma whipplei (strain TW08/27) GN=clpP2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.384e-22 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV++G+ + A + V+A+L+ L+ D + I +YINS G G + AIYDT+ ++ ++ TV +G A A ++L+AGT GKR +P+A+I+I QP + SSG ASD+ I+A+E M R+ L K L QH+ S + V+K ++ I + E+A Sbjct: 33 RIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPG---------GSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQA 187
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP1_TROWT (ATP-dependent Clp protease proteolytic subunit 1 OS=Tropheryma whipplei (strain Twist) GN=clpP1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.384e-22 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV++G+ + A + V+A+L+ L+ D + I +YINS G G + AIYDT+ ++ ++ TV +G A A ++L+AGT GKR +P+A+I+I QP + SSG ASD+ I+A+E M R+ L K L QH+ S + V+K ++ I + E+A Sbjct: 33 RIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPG---------GSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQA 187
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_GEOMG (ATP-dependent Clp protease proteolytic subunit OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARN 937 RI+++G P+ V LV+A+L++L+ DP I+LYINS G G+ + G AIYDT+ +K V T+ VG A M LLL+ G KGKRF + H++IMI QP G A+D+ I A+E + + L +++ +++G + E V E + E+A++ Sbjct: 27 RIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPG---------GVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIMIHQPLGGFQG--QATDIHIHAQEILKMKKRLNEIIAENSGQALEKVEADTERDYFMSGEEAKS 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 62/165 (37.58%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+++G + LVVA+L++L+ DP IYLYINS G G + G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++IMI QP G A+D+ I A + +D L +L + TG E + K +E E+A+ Sbjct: 28 RIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG---------GSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQG--QATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_CHLCH (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium chlorochromatii (strain CaD3) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RI+++G + V L++A+L++L+ DP+ IY+YINS G G S G IYDT+ ++ E+ TV VG A M LLA+G KGKR +PH++IMI QP + G +D++I+A+E R L +LL +HTG E V + E Sbjct: 53 RIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYINSPG---------GSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQPSGGAQG--QETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSE 195
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_CALS8 (ATP-dependent Clp protease proteolytic subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 62/164 (37.80%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV + + + L+VA+L++L+ DP IYLYINS G G + GFAIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+++IMI QP G A+D+ I A+ + + + ++L + TG E + + E T E+A Sbjct: 29 RIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG---------GSVTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVRG--QATDIKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEEA 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_BDEBA (ATP-dependent Clp protease proteolytic subunit OS=Bdellovibrio bacteriovorus GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 57/155 (36.77%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RI+ +G + V ++A++++L+ +P+ PI+LYINS G G S G AIYD + +KC+V T +G A M LLL AGTKG R+ +P+ +IMI QP L GL +D+ I AKE + ++ L ++ HTG + + +E Sbjct: 39 RIIILGTAVTDEVANSIIAQMLFLEVDNPEKPIHLYINSPG---------GSVSAGLAIYDFMQFVKCDVATYCMGMAASMGSLLLTAGTKGMRYSLPNTRIMIHQPLLSGGGLSGQVTDIEIHAKELVKTKEKLTRIYETHTGRDYDTLRAAME 184
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP5_STRAW (ATP-dependent Clp protease proteolytic subunit 5 OS=Streptomyces avermitilis GN=clpP5 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.420e-22 Identity = 61/154 (39.61%), Postives = 88/154 (57.14%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RIV++G P+ V+A+ M+L+ + P I LYINS G G S A+YDT+ + C+V T+ +G A A +LLA GT GKR +P A+++I QP LP+ ASD++I+A E R+ L +LL +HTG S E V +E Sbjct: 34 RIVFLGTPIDDTSANDVMAQFMHLEHLAPDRDISLYINSPG---------GSFSAMTAVYDTMQFVSCDVETICLGQAASAAAVLLAGGTPGKRLALPGARVLIHQPSLPAPVQGQASDLVIQAAELARTREQLEELLVRHTGQSPERVAADIE 178
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.772e-22 Identity = 63/164 (38.41%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV++G + V LVVA+L++L+ DP I LYINS G G + G AIYDT+ +K +V T+ VG A MA +LLA+GTKGKRF +P+A+IM+ QP + G P DV I KE + ++ + +L + TG + + K + + +A Sbjct: 32 RIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG---------GSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEG--PVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEA 184
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STAES (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.772e-22 Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R+ L ++L + TG S E + + + T +A+ Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAK 181 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |