DY263057

Overview
NameDY263057
Unique NameDY263057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1158
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GPDH_ENCCU (Probable glycerol-3-phosphate dehydrogenase OS=Encephalitozoon cuniculi GN=ECU10_0870 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.936e-32
Identity = 67/125 (53.60%), Postives = 91/125 (72.80%), Query Frame = 2
Query:  557 ALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVA 931
            A+I    S   D++V+GGG+TG G ALD ATRGL+V LV+  DF SGTSS+STKL+HGGVRYL KAV NLD+ Q KLV+ AL ER  + + +P+L+N++  M P +    + YY+VGLK+YD ++
Sbjct:   46 AMIERLRSEVFDLVVVGGGSTGAGCALDGATRGLKVALVDAGDFGSGTSSKSTKLVHGGVRYLAKAVSNLDWSQYKLVWQALGERTTMFEISPYLTNSIKIMVPIYSKILIPYYYVGLKLYDWIS 170          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GPDM_DICDI (Probable glycerol-3-phosphate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0283951 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.447e-32
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 2
Query:  587 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYD 922
            LD++VIGGGATG GVALDA +RG++V L E+ DFSSGTSS+STKL+HGG+RYLE A+  L   +L LV  AL ER  ++ NAPHLS  LP + P +  F+   +W+G K+YD
Sbjct:   99 LDLIVIGGGATGTGVALDAQSRGMKVALFEKYDFSSGTSSKSTKLVHGGIRYLESAIMKLKPSELTLVKEALRERSNLLNNAPHLSRQLPIVIPAYSIFDASKFWIGCKLYD 210          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPD_SYNY3 (Glycerol-3-phosphate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=glpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.490e-20
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 2
Query:  590 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFDWFEVVYYWV--GLKMYDLVA 931
            D++VIGGG  G G A D A RGL+  L+E++DF+SGTSS ST+LIHGG+RYLE       Y +  LV  +L ER+ ++  APHL   L    P +DW    Y+ +  G+ +YD+++
Sbjct:   13 DLIVIGGGINGVGTARDGALRGLKTLLIEKDDFASGTSSWSTRLIHGGLRYLE-------YFEFNLVRESLREREVLLHTAPHLVQPLQLTIPVYDWSSRAYWEIQAGMILYDILS 121          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPD_MYCLE (Glycerol-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=glpD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.661e-20
Identity = 60/127 (47.24%), Postives = 78/127 (61.42%), Query Frame = 2
Query:  548 QESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKN-APHLSNALPCMTPCFD-WFEVVYYWVGLKMYD 922
            Q +A      +   D++VIGGG  G G ALDAATRGL+V LVE  D +SGTSSRS+K+ HGG+RYLE+    L++G   LV  AL ER+  +   APHL   LP + P    W+E  Y   G+ +YD
Sbjct:   23 QRAAAWERFGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQ----LEFG---LVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPYIAAGIFLYD 142          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPO_STRPN (Alpha-glycerophosphate oxidase OS=Streptococcus pneumoniae GN=glpO PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 7.393e-20
Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  587 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFD----WFEVVYYWVGLKMYDLVA 931
            LD+L+IGGG TG GVAL AA  GL  GL+E +DF+ GTSSRSTKL+HGG+RYL++         +++V   + ER  V + APH+  + P + P +D     F +    V + +YDL+A
Sbjct:   20 LDLLIIGGGITGAGVALQAAASGLETGLIEMQDFAEGTSSRSTKLVHGGLRYLKQF-------DVEVVSDTVSERAVVQQIAPHIPKSDPMLLPVYDEDGATFSLFRLKVAMDLYDLLA 131          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPD2_MYCTU (Glycerol-3-phosphate dehydrogenase 2 OS=Mycobacterium tuberculosis GN=glpD2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.393e-20
Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  590 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKN-APHLSNALPCMTPCFD-WFEVVYYWVGLKMYD 922
            D++VIGGG  G G ALDAATRGL+V LVE  D +SGTSSRS+K+ HGG+RYLE+    L++G   LV  AL ER+  +   APHL   LP + P    W+E  Y   G+ +YD
Sbjct:   37 DVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQ----LEFG---LVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPYIAAGIFLYD 142          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPD2_MYCBO (Glycerol-3-phosphate dehydrogenase 2 OS=Mycobacterium bovis GN=glpD2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.393e-20
Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  590 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKN-APHLSNALPCMTPCFD-WFEVVYYWVGLKMYD 922
            D++VIGGG  G G ALDAATRGL+V LVE  D +SGTSSRS+K+ HGG+RYLE+    L++G   LV  AL ER+  +   APHL   LP + P    W+E  Y   G+ +YD
Sbjct:   37 DVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQ----LEFG---LVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPYIAAGIFLYD 142          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPO_STRP8 (Alpha-glycerophosphate oxidase OS=Streptococcus pyogenes serotype M18 GN=glpO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.151e-19
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  587 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFD----WFEVVYYWVGLKMYDLVA 931
            LD+L+IGGG TG GVAL AA  GL  GL+E +DF+ GTSSRSTKL+HGG+RYL++         +++V   + ER  V + APH+    P + P +D     F +    V + +YDL+A
Sbjct:   20 LDLLIIGGGITGAGVALQAAASGLDTGLIEMQDFAQGTSSRSTKLVHGGLRYLKQF-------DVEVVSDTVSERAVVQQIAPHIPKPDPMLLPVYDEPGSTFSMFRLKVAMDLYDLLA 131          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPO_STRP6 (Alpha-glycerophosphate oxidase OS=Streptococcus pyogenes serotype M6 GN=glpO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.151e-19
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  587 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFD----WFEVVYYWVGLKMYDLVA 931
            LD+L+IGGG TG GVAL AA  GL  GL+E +DF+ GTSSRSTKL+HGG+RYL++         +++V   + ER  V + APH+    P + P +D     F +    V + +YDL+A
Sbjct:   20 LDLLIIGGGITGAGVALQAAASGLDTGLIEMQDFAEGTSSRSTKLVHGGLRYLKQF-------DVEVVSDTVSERAVVQQIAPHIPKPDPMLLPVYDEPGSTFSMFRLKVAMDLYDLLA 131          
BLAST of DY263057 vs. ExPASy Swiss-Prot
Match: GLPO_STRP3 (Alpha-glycerophosphate oxidase OS=Streptococcus pyogenes serotype M3 GN=glpO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.151e-19
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  587 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIKNAPHLSNALPCMTPCFD----WFEVVYYWVGLKMYDLVA 931
            LD+L+IGGG TG GVAL AA  GL  GL+E +DF+ GTSSRSTKL+HGG+RYL++         +++V   + ER  V + APH+    P + P +D     F +    V + +YDL+A
Sbjct:   20 LDLLIIGGGITGAGVALQAAASGLDTGLIEMQDFAQGTSSRSTKLVHGGLRYLKQF-------DVEVVSDTVSERAVVQQIAPHIPKPDPMLLPVYDEPGSTFSMFRLKVAMDLYDLLA 131          
The following BLAST results are available for this feature:
BLAST of DY263057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GPDH_ENCCU4.936e-3253.60Probable glycerol-3-phosphate dehydrogenase OS=Enc... [more]
GPDM_DICDI6.447e-3257.14Probable glycerol-3-phosphate dehydrogenase, mitoc... [more]
GLPD_SYNY31.490e-2044.83Glycerol-3-phosphate dehydrogenase OS=Synechocysti... [more]
GLPD_MYCLE5.661e-2047.24Glycerol-3-phosphate dehydrogenase OS=Mycobacteriu... [more]
GLPO_STRPN7.393e-2044.54Alpha-glycerophosphate oxidase OS=Streptococcus pn... [more]
GLPD2_MYCTU7.393e-2051.33Glycerol-3-phosphate dehydrogenase 2 OS=Mycobacter... [more]
GLPD2_MYCBO7.393e-2051.33Glycerol-3-phosphate dehydrogenase 2 OS=Mycobacter... [more]
GLPO_STRP82.151e-1944.54Alpha-glycerophosphate oxidase OS=Streptococcus py... [more]
GLPO_STRP62.151e-1944.54Alpha-glycerophosphate oxidase OS=Streptococcus py... [more]
GLPO_STRP32.151e-1944.54Alpha-glycerophosphate oxidase OS=Streptococcus py... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263057 ID=DY263057; Name=DY263057; organism=Citrus clementina; type=EST; length=1158bp
AACAAACGAAACGAACAACGGTGACTCCGAAAGGTCACGCGTACGCGCGC
ATTCACGGAGTTCGCTTTCTTCATCGTCCTCTTTACTTTTAATGCTCAGT
CACAAAGCAGCCCTGCCATACCATGCACCTTTATGTGCCACGTGGAGCCA
TAGTGGGGCCCACATCAGCGCAATTACTTAAAAGCTCACAGTACTTCTAC
TTCTCTCGTTCTTTATGGCAACAAAATGGGGTATTTCAGTAAATTATGAA
ACTATTATAATGCTCAAGAGCGATTCCCAACGCAAGCTTGATTTGCTGGC
TGCCGTTAACTGAATCACTACCATTTTTTACTCTTTGCGCCAACTCTGCT
GCAATCTAGGACTCCACACTATCATGTCCGCCACTCGCATCCGCCGCTTC
GGCGCCGTACTCGCCGCCGCTGCCGGCGGAACCTCCATCCTCCTCTTCAC
GCGTCCCTCCATCGCCGGAAACGACCGGGGTCCCTCGCCCGACCTCGTCA
GGAGCCAGATCAAAAATTCGAAAGCCGTTGTTCCGTCGAGAGTCGTCCAG
GAGTCTGCTTTGATTGCCGCAAACAACAGTAATCCTCTTGACATTCTTGT
TATTGGCGGTGGCGCCACTGGATGCGGCGTTGCGCTCGACGCTGCGACGC
GAGGACTTCGCGTTGGCCTTGTCGAGAGAGAGGATTTCTCCTCCGGAACG
TCTTCACGATCCACGAAACTGATTCATGGAGGAGTCCGCTACTTGGAGAA
GGCTGTGTTTAATCTTGACTATGGTCAACTGAAGCTGGTATTCCATGCAC
TTGAGGAGCGTAAACAGGTTATTAAGAATGCACCGCATCTCAGCAATGCT
TTGCCTTGCATGACACCCTGTTTTGACTGGTTTGAAGTAGTATACTACTG
GGTGGGGCTGAAAATGTACGATTTGGTCGCAAGAAGACATCTGTTACATT
TAACTAGATATTATCTGGCACAGATCTGCTGAGCTGTTCCCTACTCTTTG
CATGAAGGCCAAGAATAGAACTTGGAAGGGCCCAAGGGTGGTAATATAAT
GGTCAAAAGAATGAATCCTCCGCCTTAAGGTGGGAATAACAATGAACGGG
CTTCACTGGGTGGGGGCGTGGAGGGGCTTAACCCTGCCAAAAATTAAATT
TCTCTCTT
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