DY263059

Overview
NameDY263059
Unique NameDY263059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1267
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.788e-21
Identity = 74/253 (29.25%), Postives = 124/253 (49.01%), Query Frame = 2
Query:  320 VNGSHQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIYS-IAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEMEKAYRD 1051
            V  S+ + I  +S  +   +G+ I S TF  G      W +   P G   E++  Y+SL++ L S   ++VRA F+ ++L+  G+E         + +ES       +G  WG+K+F +R  L  E +  L  D L++ C V VV+   +  G    + + +P   +    G L E+ + TD    V G+ F AHK +LAARSPVF       M++     ++++D+E  VFK ++ F+Y      ++K   D
Sbjct:   30 VKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDKMADD 272          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.289e-20
Identity = 72/249 (28.92%), Postives = 121/249 (48.59%), Query Frame = 2
Query:  320 VNGSHQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTE---GPKIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEMEK 1039
            V  S+ + I  +S  +   +G+ + S TF  G      W +   P G   +++  Y+SL++ L S   ++VRA F+ +LL+   +E         + +ES       +G  WG+K+F +R  L  E +  L  D L++ C V VV+            +  +P   + +  G L E+ + TD  F V G+ F AHK VLAARSPVF       M++     +++ D++  VFK ++ F+Y    P ++K
Sbjct:   30 VKFSYMWTINNFSFCRE-EMGEVLKSSTFSSGPNDKMKWCLRVNPKGLD-DESKDYLSLYLLLVSCPKSEVRAKFKFSLLNDKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTSKVPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDK 268          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.289e-20
Identity = 71/249 (28.51%), Postives = 118/249 (47.39%), Query Frame = 2
Query:  320 VNGSHQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTE---GPKIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEMEK 1039
            V  S+ + I  +S  +   +G+ + S TF  G      W +   P G   +++  Y+SL++ L S   ++VRA F+ +LL+   +E         + +ES       +G  WG+K+F +R  L  E +  L  D L++ C V VV+             + +P   +    G L E  + TD +  V G+ F AHK +LAARSPVF       M++     + + D+E  VF+ ++ F+Y    P +EK
Sbjct:   30 VKFSYMWTINNFSFCRE-EMGEVVRSSTFSSGPNDKMKWCLRVNPKGLD-DESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNMLKVPECQLSDDLGNLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEK 268          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.862e-19
Identity = 68/249 (27.31%), Postives = 120/249 (48.19%), Query Frame = 2
Query:  320 VNGSHQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTE---GPKIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEMEK 1039
            V  S+ + I  +S  +    G+ + S +F  G      W +   P G   +++  Y+SL++ L S    +VRA F+ +LL+   +E         + +ES       +G  WG+K++ +R  L  E +  L  D L+++C V VV+            ++ +P   + +  G L E+ + TD +  V G+ F AHK +LAARSPVF       M++     + + D++  VFK ++ F+Y    P ++K
Sbjct:   30 VKFSYMWTINNFSFCRE-ETGEVLKSSSFSSGPNDKLKWCLRVNPKGLD-DESKDYLSLYLLLVSCPKNEVRAKFKFSLLNSKNEET--------KAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGLLPDDKLTLYCEVSVVQDSINISGQSSSNNLKVPECRLAEDMGYLWENRRFTDCSLFVEGKEFKAHKSILAARSPVFSAMFEHPMQESRKNRVYIRDVDPEVFKEMMRFIYTGGTPHVDK 268          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.022e-17
Identity = 68/243 (27.98%), Postives = 121/243 (49.79%), Query Frame = 2
Query:  332 HQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKR-TLLEQSDYL-KGDCLSVHCSVGVVKSHTEGP---KIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEM 1033
            +++ I+ +S   G GI + I S  F +      AW +  +P+G   E++  Y+S+++ L +     VRA FE  + +  G++     S    + +        R   WG+ +F  R +LL   ++L   D L++ C V +V +    P    I +I  P   +    G+L E+   TD +  V G  F AHK++LAARSPVFR      M+++   C ++++++  VFK +++F+Y    P +
Sbjct:   22 YEWTISNFSFCMG-GIRRKIKSPVFSLEANEEVAWCLRVHPNGFD-EESKDYLSVYLVLVNCPKRQVRAKFEFWIKNSQGEKYQYTQSLNVHSFQ--------RKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIVGAILNMPGQNMIPAIKDPRHMLTDDLGKLWENSLFTDCSLLVAGHEFRAHKVILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIYTGKAPTL 254          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.292e-16
Identity = 67/228 (29.39%), Postives = 110/228 (48.25%), Query Frame = 2
Query:  383 KYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVH-SHFGRTLESGPYTLKYRGSMWGYKRFFKR-TLLEQSDYLK-GDCLSVHCSVGVVKSHT----EGPKIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEM 1033
            +YI S  F +       W +  YP G   E N  YVSL++ L S E   V A FE+ +L+  G++ +      F R     P+         G+++F  R + L  +  L   D  ++ C V V++       + P+  +I +    +    G+L E+   TD +  V G  F AHK +LAARSPVFR      M+++ T C+++ D++  VFK ++ F+Y   +P +
Sbjct:   38 EYITSPVFSLEDNDKMTWCLRVYPTGVD-EKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPF---------GFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRP-AIKVTRCTLEDDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHL 254          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.322e-16
Identity = 61/210 (29.05%), Postives = 105/210 (50.00%), Query Frame = 2
Query:  422 AWAIYFYPDGKSVEDNAAYVSLFIALASE-GTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGP---KIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEM 1033
            AW +  YP+G   E++  Y+S+++ L S   + + A FE  +++  G++      +  R + +    L+Y     G+K+F  R LL   Q+ +L  D  ++ C V +V +  + P   +  +I  P   +    G+L ++   TD    V G  F AHK +LAARSPVFR      MK+     I++ D++  VFK ++ F+Y    P +
Sbjct:   54 AWCLRLYPNGVD-EESKDYLSVYLELLSALESPILAKFEFWIINSQGEK------YQSRKISNVQCFLQYEHR--GFKKFLLRGLLLSHQNWFLPEDQFTICCKVSIVGTVFDMPGQKRTPAIKDPRHMLTDDLGELWDNSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIYTGKAPHL 254          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 4.746e-15
Identity = 71/243 (29.22%), Postives = 110/243 (45.27%), Query Frame = 2
Query:  332 HQFKITGYSLSKGLGIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALASE-GTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGPK---IYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEM 1033
            +++ I+ +S   G GI + I S  F        AW +  YP G   E    Y+S+++ L S   + V A F+  +++  G++  K  S            L Y  S  G+K+F  R LL   ++  L  D L++ C V ++      P      +I  P   +    G+L E+   TD    V G  F AHK +LAARSPVFR      MK+     IK+ ++   VFK ++ F+Y    P +
Sbjct:   22 YKWTISNFSFCMG-GIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKD-YLSVYLVLLSHLQSPVWAKFKFWIINSQGEKYQKTKSPIVECF------LTYEQS--GFKKFLPRDLLLSHRNCLLPEDQLTICCKVTILGRKYNMPSQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHL 254          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.355e-14
Identity = 62/228 (27.19%), Postives = 105/228 (46.05%), Query Frame = 2
Query:  377 IGKYIASDTFMVG---GYAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGPKIYSIA----IPPSNIGQHFGQLLESGKRTDVNFEVNGE------TFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLY 1012
            +G+ + S TF  G      W +   P G   E++  Y+SL++ L     ++VRA F+ ++L+   +E         + +ES       +G  WG+K+F +R  L  E +  L GD LS+ C V VV          +++    +PP  +      L ++ + +D       +      TF  HK +LAARS VF       M++ +T    V+D+E  V + LL ++Y
Sbjct:  112 MGEVLKSSTFSAGCNDKLKWCLRINPKGLD-EESRDYLSLYLLLVQCNKSEVRAKFKFSILNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPGDRLSIFCEVSVVAETVNVTGQTNVSQLFKVPPCRLADDMYGLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMY 330          
BLAST of DY263059 vs. ExPASy Swiss-Prot
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.377e-12
Identity = 62/230 (26.96%), Postives = 103/230 (44.78%), Query Frame = 2
Query:  374 GIGKYIASDTFMVGG---YAWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFELTLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIY-SIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRGQLYGSMKDQNTQCIKVEDMEAPVFKALLNFLYWESLPEME 1036
            GI + I S  F +       W +  +P+G   E +  Y+S+F+ L S   + V A +E  +    G++   + S    + +   Y         G+K+F     L      +L  + L++ C V +V S     G  I  +I  P   +    G+L E+   TD    V G  F AHK +LAARSPVFR      M+++     ++ D++  VFK ++ F+Y    P ++
Sbjct:   35 GIRRTITSPVFSLEANDEVTWCLIAHPNGVD-EVSECYMSVFLELLSCRKSPVWAKYEFWITTSQGEKYQCMKSFNVHSFQKNQYR--------GFKKFILGDFLISHPRRFLPENKLTLCCKVSIVGSVFGMPGQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIYTGKAPHLQ 255          
The following BLAST results are available for this feature:
BLAST of DY263059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SPOPA_XENLA5.788e-2129.25Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
SPOPL_MOUSE1.289e-2028.92Speckle-type POZ protein-like OS=Mus musculus GN=S... [more]
SPOLB_DANRE1.289e-2028.51Speckle-type POZ protein-like B OS=Danio rerio GN=... [more]
SPOPL_XENLA1.862e-1927.31Speckle-type POZ protein-like OS=Xenopus laevis GN... [more]
TDPZ2_MOUSE1.022e-1727.98TD and POZ domain-containing protein 2 OS=Mus musc... [more]
TDPZ4_MOUSE4.292e-1629.39TD and POZ domain-containing protein 4 OS=Mus musc... [more]
TDPZ3_MOUSE7.322e-1629.05TD and POZ domain-containing protein 3 OS=Mus musc... [more]
TDPZ1_MOUSE4.746e-1529.22TD and POZ domain-containing protein 1 OS=Mus musc... [more]
BAT43_CAEEL2.355e-1427.19BTB and MATH domain-containing protein 43 OS=Caeno... [more]
TDPZ5_MOUSE8.377e-1226.96TD and POZ domain-containing protein 5 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263059 ID=DY263059; Name=DY263059; organism=Citrus clementina; type=EST; length=1267bp
CAGGTGGGAAAAAGTTAATTTCCCTAACGTAACCCTAGATTTTCTCGGCC
AACCAAACACCCACTTTCCCGAGAAATTCCCAAACCCAAACCCCAATCAC
ACACCCAATTCACCCCACCACCACCATTCAGTCCCCTCCTAACCCGTCGT
TTTCCGGAGAAAATCCCGCCCCCCAATCAAATTTTGATTTTCCGAGAAAA
TTCCTCCTCTGAAATTCCCGGTCATGGGAAAGATTTTCCGGGAATACAGC
AAGCCCAATAATGCCTCTTCATCCTCCACCTCCGAAAGCAGCACCACGTC
GACGTCGATCACCGAGACGGTTAACGGATCTCACCAGTTCAAAATCACCG
GGTATTCTTTGTCGAAGGGCCTGGGGATCGGCAAGTACATAGCGTCCGAT
ACGTTCATGGTGGGCGGTTACGCGTGGGCGATTTATTTTTATCCCGATGG
CAAAAGCGTGGAGGACAATGCCGCGTACGTCTCGCTTTTTATCGCGTTGG
CTAGTGAGGGGACTGACGTGAGGGCGCTTTTCGAGCTCACTTTGTTGGAT
CAGAGCGGCAAAGAGCGTCACAAGGTTCATAGCCATTTTGGCAGGACGCT
GGAGAGCGGGCCTTACACCCTTAAGTATCGCGGTAGCATGTGGGGGTACA
AGCGGTTTTTCAAGCGTACTCTTCTGGAACAATCAGACTACCTCAAGGGT
GATTGCCTCTCGGTCCACTGCAGTGTTGGTGTTGTGAAGTCACACACAGA
GGGGCCTAAGATTTACTCCATAGCGATACCGCCTTCTAACATTGGTCAGC
ACTTTGGCCAACTACTGGAAAGTGGGAAGAGAACTGATGTAAATTTTGAA
GTCAACGGTGAAACATTTGCTGCTCACAAATTGGTTCTTGCTGCTCGTTC
ACCTGTTTTTAGGGGCCAACTTTATGGGTCGATGAAGGATCAGAACACCC
AGTGTATAAAAGTTGAGGACATGGAGGCCCCAGTTTTTAAGGCTTTACTA
AATTTTCTATATTGGGAAAGTCTACCGGAAATGGAAAAAGCTTACCGGGA
TGAAGTTCAAGGGGGGGCTTCACTTTTGAAGGCCCCACCACCGGCCCCCC
CAACACCGGGAAAGGGTGTGGGCCGGGGAAAGGGGTTAGGGGGGGGATAG
GGGGGGGCCAACCCTCGGGGGGGGGGAGGTGGCCATATAAAAAGGGGGGG
GGAAACCACCAAAAAAACCTGGGGGGGAAAAAGAAAACCCCTATTGGGGT
TTTTTCCGGGCGGTAAA
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