DY263060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN3B_ORYSJ (Putative auxin efflux carrier component 3b OS=Oryza sativa subsp. japonica GN=PIN3B PE=3 SV=2) HSP 1 Score: 320.087 bits (819), Expect = 1.545e-86 Identity = 163/265 (61.51%), Postives = 202/265 (76.23%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGC------LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHAD 914 MI+ + Y V++A+VPLYVAM++AYGSV+WW + TP+QCSGINRFVA+ AVPLLSFHFISS+DPY MNLRF+AADTLQK++VL LA WS+ R L+ +ITLFSVSTLPNTLVMGIPLL MYG +SG LMVQIVVLQ I+WYTL+LF+FE+R AR+LI+ QFPDTA SI ++HVD D++SL+G Q E AE+ DG+L + V +S+ S R ++ TPR SNLT EIYS+ SSRN TPRGS+F AD Sbjct: 1 MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFISSSDPYAMNLRFVAADTLQKVLVLAALAAWSRFPARFVPPAWPPLDCSITLFSVSTLPNTLVMGIPLLVSMYGPYSGDLMVQIVVLQSIVWYTLLLFLFEFRAARVLIAAQFPDTAASIAAVHVDPDVVSLEGSQ-AEAHAEVAPDGRLRMVVCRSSVS-------RRSAAAAATPRASNLTGVEIYSISSSRNATPRGSTFTLAD 257
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN6_ARATH (Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2) HSP 1 Score: 295.819 bits (756), Expect = 3.120e-79 Identity = 150/248 (60.48%), Postives = 187/248 (75.40%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFP-DTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRN 878 MIT +FY VM AM PLY AM +AYGSVKW KIFTP QCSGINRFV++FAVP+LSFHFIS N+PYKM+ FI ADTL KI V V+L++W+ K G L+W ITLFS++TLPNTLVMGIPLL+ MYG+++ +LMVQ+VVLQCIIWYTL+LF+FE R ARLLI +FP AGSI I VD D++SLDG PL T+ E +G++ + +R+S +S D S L TPR SNL+NAEI+S+ + N Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFISQNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPLLQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDDDVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCL---TPRASNLSNAEIFSVNTPNN 245
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN8_ARATH (Putative auxin efflux carrier component 8 OS=Arabidopsis thaliana GN=PIN8 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.013e-45 Identity = 87/157 (55.41%), Postives = 111/157 (70.70%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGA 608 MI D Y V+ AMVPLYVA+IL YGSVKWW IFT DQC INR V F +PL + F + DP+ MN RFIAAD L K+I++ VLA+W+K S +G W+IT FS+ TL N+LV+G+PL K MYG+ + L+VQ V Q I+W TL+LF+ E+R A Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPLAKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKA 157
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN5_ORYSJ (Probable auxin efflux carrier component 5 OS=Oryza sativa subsp. japonica GN=PIN5 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.910e-44 Identity = 94/195 (48.21%), Postives = 126/195 (64.62%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVL---AIWSKLSKRGC-----------LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDI 680 MIT ++ Y V+ AM PLY A L YGSV+W K F+ +QC+GIN FVAL+AVP+L F +S+N+ YKMN R IAADTLQK ++L+ L A+W + RG L+W IT FSV++LPNT++MG+PLL GMYG S LM QIVV+Q IWY +++F++EY AR S P ++ I S + Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVSTNNVYKMNGRLIAADTLQKAVLLLGLMAWALWERSRARGAGAKAKAAVSSPLQWVITCFSVASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYEYMAARRSASAPPPASSEGSAKISPSSPV 195
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN5_ARATH (Putative auxin efflux carrier component 5 OS=Arabidopsis thaliana GN=PIN5 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 6.145e-43 Identity = 91/200 (45.50%), Postives = 132/200 (66.00%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAI----WSKLSKR-GCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAE 722 MI+ D YHV++A VPLYV+M L + S + K+F+P+QC+GIN+FVA F++PLLSF IS N+P+KM+ + I +D LQK +V+VVLA+ W R G L W IT S+S LPNTL++G+P+L +YG+ + S++ QIVVLQ +IWYT++LF+FE AR L P + S+ D + +++ E D E Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIISENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLILGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARAL-----PSSGASLEHTGNDQEEANIEDEPKEEEDEE 195
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN6_ORYSJ (Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN6 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.977e-41 Identity = 77/161 (47.83%), Postives = 113/161 (70.19%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSK-LSKRGC-LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARL 614 MI D Y V+ A VPLY A+ L YGSV+WW+IFT +QC +NR VA FA+P +F F DP+++N R +AAD + K +++ V+ W++ +SK GC + W+IT FS+STL N+LV+G+P+ + MYGE++ L+VQ+ V Q I+W TL+LF+ E R A + Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTLHTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGVPMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAI 161
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN4_ORYSJ (Probable auxin efflux carrier component 4 OS=Oryza sativa subsp. japonica GN=PIN4 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.954e-37 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSK------LSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGA 608 MI D Y V+ AM PLY A+ L YGSV+WW+ FT +QC+ IN V F++P +F F+ DP+ MN R IAAD + K I + +A W++ +K G W+IT FS++ L NTLV+G+PLL MYG ++ L+VQI V+Q ++W+ L+L FE R A Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVVRTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTLVVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKA 163 The following BLAST results are available for this feature:
BLAST of DY263060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263060 ID=DY263060; Name=DY263060; organism=Citrus clementina; type=EST; length=1148bpback to top |