DY263062

Overview
NameDY263062
Unique NameDY263062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1262
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: KLHL1_MOUSE (Kelch-like protein 1 OS=Mus musculus GN=Klhl1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.190e-12
Identity = 51/171 (29.82%), Postives = 85/171 (49.71%), Query Frame = 2
Query:  119 LYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKGLGSHREVMS--EAYDPETNSWTPISDGLVAGWRNPSVSLNGRLYALDCRDG----CKLRVYDEATDSWN 613
            LY  GG D  +G+   +  Y  RTN W +A  M  +R  FG  V+++ L+V GG  +G+ +TL + E Y+P    W+ +  MST        + +G  +  G       ++  E +DP++  WT ++   +A       +LNG+LY++  RDG      +  YD  T+ W+
Sbjct:  464 LYAVGGMDNNKGATT-IEKYDLRTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGR-DGL-KTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQSQQWTYVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWS 631          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: KLHDB_DROSI (Kelch-like protein diablo OS=Drosophila simulans GN=dbo PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.860e-12
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 2
Query:   92 GCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKGLGSHREVM----SEAYDPETNSWTPISDGLVAGWRNPSVSL---NGRLYALDCRDGC----KLRVYDEATDSW 610
            G AVL    LY  GG+D ++  +  V  Y  + NKW +   M  +R      VL   LY  GG  +G Q  L + E YDP  N+W  ++ MST        +++   ++  +G   + M    +E Y+P TN+W+PI   +    R   V L   NG+LYA+   DG      + VYD  T+ W
Sbjct:  411 GVAVLDE-FLYAVGGQDGVQ-CLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGS-DG-QCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNN--YIYAVGGRDDCMELSSAERYNPLTNTWSPI---VAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQW 585          

HSP 2 Score: 72.0182 bits (175), Expect = 8.322e-12
Identity = 53/156 (33.97%), Postives = 71/156 (45.51%), Query Frame = 2
Query:   20 FDPVYQLWQPLPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKG--LGSHREVMSEAYDPETNSW 481
            +DP    W  + P+    +  LG   AVL G  LY  GG D  +  +  V  Y  R NKW     M  +R   G  V NN +Y  GG  + ++  L SAE Y+P  N WS I  M++        + +G+ +  G   GS      E YDPETN W
Sbjct:  437 YDPKENKWSKVAPMT---TRRLGVAVAVLGG-FLYAIGGSDG-QCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCME--LSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQW 585          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: ENC2_RAT (Ectoderm-neural cortex protein 2 OS=Rattus norvegicus GN=Klhl25 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.860e-12
Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 2
Query:   50 LPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECE--GI-----QRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFL-KGLGSHREVMS--EAYDPETNSWTPISDGLVAGWRNPSVSLNG 541
            LP   KE+S       A   GC +Y+ GG+    G  + V  Y     +W +A  ML  R   GS  L NCLYV GG     GI       +L+  E YDP  N+W+ +A M   +     V    K F+  G   HR+++S  + +DP  N WT I       WR  + ++ G
Sbjct:  326 LPSPRKEFS-------ASAIGCKVYVTGGRGSENGVSKDVWVYDTVHEEWSKAAPMLIARFGHGSAELENCLYVVGGHTSLAGIFPASPSVSLKQVEKYDPGDNKWTMVAPMRDGVSNAAVVSAKLKLFVFGGTSIHRDMVSKVQCFDPSDNRWT-IKAECPQPWRYTAAAVLG 491          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: ENC2_MOUSE (Ectoderm-neural cortex protein 2 OS=Mus musculus GN=Klhl25 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.860e-12
Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 2
Query:   50 LPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECE--GI-----QRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFL-KGLGSHREVMS--EAYDPETNSWTPISDGLVAGWRNPSVSLNG 541
            LP   KE+S       A   GC +Y+ GG+    G  + V  Y     +W +A  ML  R   GS  L NCLYV GG     GI       +L+  E YDP  N+W+ +A M   +     V    K F+  G   HR+++S  + +DP  N WT I       WR  + ++ G
Sbjct:  326 LPSPRKEFS-------ASAIGCKVYVTGGRGSENGVSKDVWVYDTVHEEWSKAAPMLIARFGHGSAELENCLYVVGGHTSLAGIFPASPSVSLKQVEKYDPGDNKWTMVAPMRDGVSNAAVVSAKLKLFVFGGTSIHRDMVSKVQCFDPSENRWT-IKAECPQPWRYTAAAVLG 491          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: NS1BB_DANRE (Influenza virus NS1A-binding protein homolog B OS=Danio rerio GN=ivns1abpb PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.735e-12
Identity = 65/239 (27.20%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   20 FDPVYQLWQPLPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMS-----TAMVPFIGVIYDGKWFLKGLGSHREVMS-EAYDPETNSWTPISDGLVAGWRNPSVSLNGRLYALDCRDGCK----LRVYDEATDSWNKFMDSKLHLGS-SRALEAAAIVPLNGKLCII 703
            +DP    W  + P+    +    F  AVL G  +Y+ GG +     +     Y+ R ++W + P++   R   G C L N L+V GG     Q+ L++ + +DP    W+  A ++      A+    G +Y     + G  S   + S E Y+PE N+WT ++   VA          G+L+ +   DG      + VYD AT+ W         LGS + A   A +  LN  LC +
Sbjct:  385 YDPKKDCWTFIAPMRTPRAR---FQMAVLMG-EVYVMGGSNGHSDELSCGEMYNPRADEWIQVPELRTNRCNAGVCSLQNKLFVVGGSDPCGQKGLKNCDSFDPVTKMWTSCAPLNIKRHQAAVCELSGYMY----VIGGAESWNCLNSVERYNPENNTWTLVASMNVARRGAGVAVYEGKLFVVGGFDGSHALRCVEVYDPATNEWRM-------LGSMTSARSNAGLAVLNNVLCAV 608          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: ENC2_HUMAN (Ectoderm-neural cortex protein 2 OS=Homo sapiens GN=KLHL25 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.735e-12
Identity = 63/217 (29.03%), Postives = 89/217 (41.01%), Query Frame = 2
Query:   50 LPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECE--GI-----QRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFL-KGLGSHREVMS--EAYDPETNSWTPISDGLVAGWRNPSVSLNGRLYALDCRD----GCKLRVYDEATDSWNKFMDSKLHLGSSRAL 658
            LP   KE+S       A   GC +Y+ GG+    G  + V  Y     +W +A  ML  R   GS  L NCLYV GG     G+       +L+  E YDP  N+W  +A +   +     V    K F+  G   HR+++S  + YDP  N WT I       WR  + ++ G    +   D          +D  T+ W +  D      S  AL
Sbjct:  326 LPSPRKEFS-------ASAIGCKVYVTGGRGSENGVSKDVWVYDTVHEEWSKAAPMLIARFGHGSAELENCLYVVGGHTSLAGVFPASPSVSLKQVEKYDPGANKWMMVAPLRDGVSNAAVVSAKLKLFVFGGTSIHRDMVSKVQCYDPSENRWT-IKAECPQPWRYTAAAVLGSQIFIMGGDTEFTAASAYRFDCETNQWTRIGDMTAKRMSCHAL 534          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: SKIP4_ARATH (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana GN=SKIP4 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.879e-12
Identity = 64/247 (25.91%), Postives = 106/247 (42.91%), Query Frame = 2
Query:   86 GFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRA-PDMLRKRHFFGSCVLNNCLYVAGGECEGIQ-RTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKGL--GSHREVMSEAYDPETNSWTPISDGLVAGWRNPSVSLNGRLYALDCRDGCKLRVYDEATDSWNKFMDSKLHLGSSRAL---EAAAIVPLNGKLCIIRNNMSISMVDVSSPDKH-------VESNPHIWEN 784
            G G AVL G  L++ GG   L  +   +  Y A  N W    P +  KR +F    L+  +   GG   G+     R+ +IYDP        +D++         + DG+ +++G   GS   V    Y   +  W  + D + +GWR P+V + G LY LD   G KL ++ + T  W       +H+G    L   +   +V +   + +I  + S  ++DV +  K+         S P  W++
Sbjct:  114 GMGFAVL-GKRLFVLGGCGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGL--GLNPNAKRTWDIYDPLTRTCKSCSDVNIVPEMEDSFVMDGRIYIRGGVGGSSTAV----YSASSGIWERMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMW-------IHIGKLSQLVMKQPCRLVSIGNSIFVIGKDCSTVVIDVENVRKNKMNGVMVCSSIPKTWDD 346          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: KLHL9_MOUSE (Kelch-like protein 9 OS=Mus musculus GN=Klhl9 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 4.879e-12
Identity = 55/212 (25.94%), Postives = 87/212 (41.04%), Query Frame = 2
Query:   20 FDPVYQLWQPLPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPL----RGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKGLGSHREVMSE--AYDPETNSWTPISDGLVAGWRNPSVSLNGRLYAL---------DCRDGCKLRVYDEATDSW 610
            +D   Q W+ L P+     +    G AV+ G  LY+ GG+       + ++  V  +  R NKW +   +  KR FF    L   LY  GG     +  L + E Y+P  N WS++A MS       G +Y G  ++ G  +H    +E   +DP+T+ WT  +        +   ++  +LY +         D  D      Y    D W
Sbjct:  320 YDERAQEWKSLAPMDAPRYQ---HGIAVI-GNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGHLYAVGGRSAAGE--LATVECYNPRMNEWSYVAKMSEPHYGHAGTVYGGLMYISGGITHDTFQNELMCFDPDTDKWTQKAPMTTVRGLHCMCTVGDKLYVIGGNHFRGTSDYDDVLSCEYYSPTLDQW 525          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: KLH21_HUMAN (Kelch-like protein 21 OS=Homo sapiens GN=KLHL21 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 6.372e-12
Identity = 61/237 (25.74%), Postives = 110/237 (46.41%), Query Frame = 2
Query:    5 ISWNAFDPVYQLWQPLPPVPKEYSEALGFGCAVLS-GCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFIADMSTAMVPFIGVIYDGKWFLKGLGSHREVM-SEAYDPETNSWTPISDGLVAGW--RNPSVSLNGRLYALDCRDGCKLRVYDEATDSWNKFMD-SKLHLGSSRALEAAAIVPLNGKLCI 700
            ++ + ++P    W+ L     E+ + LG G ++++ G  +Y+ GG D  R     V  Y++  N+W     ML+ R +  S VL+  LYV   +         S E YD   + W  +  M+  M         G+ +  G  + +E M  + YDP+T+ W+ +  G +  W     + +LNG +Y +   D  ++ VY+   + W+K    +++H+G S A+       L GKL +
Sbjct:  302 VTVDCYNPQTGQWRYLA----EFPDHLGGGYSIVALGNDIYVTGGSDGSR-LYDCVWRYNSSVNEWAEVAPMLKAREYHSSSVLDGLLYVVAAD---------STERYDHTTDSWEALQPMTYPMDNCSTTACRGRLYAIGSLAGKETMVMQCYDPDTDLWSLVDCGQLPPWSFAPKTATLNGLMYFVR-DDSAEVDVYNPTRNEWDKIPSMNQVHVGGSLAV-------LGGKLYV 516          
BLAST of DY263062 vs. ExPASy Swiss-Prot
Match: SKI25_ARATH (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana GN=SKIP25 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.087e-11
Identity = 58/273 (21.25%), Postives = 110/273 (40.29%), Query Frame = 2
Query:    5 ISWNAFDPVYQLWQPLPPVPKE-------------YSEALGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVLNNCLYVAGGECEGIQRTLRSA----EIYDPNKNR----WSFIADM-----STAMVPFIGVIYDGKWFLKGLGSHREVMSEAYDPETNSWTPISDGLVAGWRNPSVSLNGR-LYALDCRDGCKLRVYDEATDSWNKFMDSKLHLGSSRALEAAAIVPLNGKLCIIRNNMSISMVDVSS 742
            + +  F+PV   W PLPP P +              S  L   C   +G  + + G    L  ++   + +   ++ W   P +   R +  +   +  +Y+A G       T+  +    ++ + N+N     W  + DM     S   +  +G  Y  K  +  +          YD   + W P+ + ++ GWR P  ++    LY++D R G  +R YD+    W + +   +  G      A  +   +GKLC++  +  I +VDV++
Sbjct:   97 VRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVG--YRRKLLMVNVKGDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRG-TVRKYDDEKREWREVV--VVEGGEEMLKGATQVTADSGKLCVVTGDGKIVVVDVAA 364          
The following BLAST results are available for this feature:
BLAST of DY263062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
KLHL1_MOUSE2.190e-1229.82Kelch-like protein 1 OS=Mus musculus GN=Klhl1 PE=2... [more]
KLHDB_DROSI2.860e-1232.07Kelch-like protein diablo OS=Drosophila simulans G... [more]
ENC2_RAT2.860e-1232.18Ectoderm-neural cortex protein 2 OS=Rattus norvegi... [more]
ENC2_MOUSE2.860e-1232.18Ectoderm-neural cortex protein 2 OS=Mus musculus G... [more]
NS1BB_DANRE3.735e-1227.20Influenza virus NS1A-binding protein homolog B OS=... [more]
ENC2_HUMAN3.735e-1229.03Ectoderm-neural cortex protein 2 OS=Homo sapiens G... [more]
SKIP4_ARATH4.879e-1225.91F-box/kelch-repeat protein SKIP4 OS=Arabidopsis th... [more]
KLHL9_MOUSE4.879e-1225.94Kelch-like protein 9 OS=Mus musculus GN=Klhl9 PE=2... [more]
KLH21_HUMAN6.372e-1225.74Kelch-like protein 21 OS=Homo sapiens GN=KLHL21 PE... [more]
SKI25_ARATH1.087e-1121.25F-box/kelch-repeat protein SKIP25 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CH02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263062 ID=DY263062; Name=DY263062; organism=Citrus clementina; type=EST; length=1262bp
AAAGATATCATGGAATGCTTTCGACCCTGTCTATCAGCTCTGGCAACCAC
TTCCACCAGTTCCCAAAGAATATTCTGAGGCCCTTGGTTTCGGCTGTGCT
GTTCTAAGTGGCTGCCATCTATACTTATTTGGAGGAAAGGATCCACTTAG
GGGGTCCATGAGACGGGTCATTTTCTACAGTGCCCGAACAAATAAATGGC
ATAGGGCGCCTGATATGCTTCGGAAACGTCATTTCTTTGGTTCTTGTGTC
CTAAATAACTGTCTCTATGTGGCCGGTGGGGAATGCGAAGGAATTCAAAG
GACTCTCCGCTCTGCTGAAATCTATGACCCTAACAAAAACCGATGGAGCT
TTATTGCAGACATGAGCACAGCAATGGTGCCCTTCATAGGAGTCATTTAT
GATGGAAAATGGTTTCTAAAAGGTCTAGGGTCCCACCGTGAGGTCATGAG
TGAAGCCTATGATCCTGAAACTAATAGCTGGACTCCAATTAGTGATGGCC
TGGTTGCAGGTTGGCGTAACCCTAGTGTCTCTTTAAATGGTAGGCTTTAT
GCTTTGGATTGCCGGGATGGGTGCAAGCTGAGGGTTTATGATGAAGCCAC
TGATTCATGGAACAAATTTATGGATAGCAAGCTTCATCTAGGGAGCTCCC
GCGCATTGGAGGCTGCAGCAATTGTTCCCCTGAATGGGAAACTTTGTATC
ATTCGTAACAACATGAGCATTAGTATGGTTGATGTTTCTAGTCCTGACAA
ACATGTGGAGAGTAATCCACACATATGGGAAAATATTGCCGGGAAAGGTC
ATTTCAGGACTCTTGTCACAAATTTACTGTCTAGCATAGCAGGCCGGAGT
GGCTTGAAAAGTCACATTGTGCACTGTCAGGTGCTTTCAGCGTGAAACCC
ATAATTGATTTTGCTCATGCTTACCATAGCAATTTGTGCATTTCCTTCAC
TTGGCTGTGATGGGTTTTTCTATTTTGCAGTTACCTATATGGGAATTCTG
GCTTTTTTTGTTTCAAAAAGCTTCTTATACTCTCTGGTACTGCTCTGAAT
CTTCATTTTGCCAAAGATTGATTTGACAATGAGTTTGCTTGGGGGAGTTT
TATGGATTTTTTTCTTTGGTTAAATTTTTTTTTCCCAGTGTTAAAGGCTT
GGGAAAAAATGAAAAAAAGAAAAAATGTTTTTTTTAGGGGTTTTTTGGTC
CCAAAAAGGGTGCCCCCGGGGAAAAATGGAGAAAAAGGGCAAAAAAAAAT
ATCTCCCTTGAA
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