DY263063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_VIBVU (Multidrug resistance protein norM OS=Vibrio vulnificus GN=norM PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.943e-17 Identity = 84/360 (23.33%), Postives = 153/360 (42.50%), Query Frame = 2 Query: 23 QAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFGF----GFGNKGAALSNAISYWTNVIILAIYIKFSPKCEKT--WTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGG--GWQNLGAYVNLE--AYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 Q GA + + + + ++ SIPI + T I ++ D ++ Y ++ ++ + L Q + P M+ I L+++ W ++G G G ++ AI YW ++L Y+ S + + +T F L LG P A + E + + + L+ + P + +++N S+VF +P G+A S RV + LG AR+A + I++ L+ V + + V R +Y+++ VI ++ A+ + QV+ G G++++ A N AY+L GLP GL W++ P G +G W G I G Sbjct: 74 QLNGAGKREQVPFEIQQGAVMALLISIPIIGVLFQTQWILGYMNVDAVMATKTIGYIHAVMFAVPAFLLFQTLRSLTDGLSLTKPAMVIGFIGLLLNIPLNWMFVYGKLGAPALGGVGCGVATAIVYWIMFLLLLFYVTTSHRLRQVQLFTTFHPPQLNAQVKLFKLGFPVAAALFFEVTLFAVVALL--VAPLGSTVVAAHQVAINFSSLVFMLPMSIGAATSIRVGHMLGEKSTEGARIASHVGILVGLSTAVFTALLTVILREQIALLYTDNRVVITLAMQLLIFTAI----YQCTDAIQVIAAGALRGYKDMRAIFNRTFIAYWLLGLPTGYVLGLTDWIVEPMGAQGFWIGFIVG 427
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_VIBCH (Multidrug resistance protein norM OS=Vibrio cholerae GN=norM PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.943e-17 Identity = 87/361 (24.10%), Postives = 158/361 (43.77%), Query Frame = 2 Query: 23 QAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGG--GWQNLGAYVNLE--AYYLKGLP-----GL*IWLLS-PFGGKGLWKGIICG 1057 Q GA + + + + +++ S+PI + T I + + ++ Y +I ++ Y L Q F + P M+ I L+++ W ++G FG G G ++ AI YW +++L YI S + K + F K + L LG P A + E + + + L+ + P + ++LN S+VF P G+AVS RV ++LG A +A + ++ L + + + V R +Y+ + +V+ +A + + A M++ QV+ G G++++ A + +Y++ GLP G+ WL P G KG W G I G Sbjct: 74 QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALL--VAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTEN-QVVVALAMQLLLFAAIYQCMDA---VQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: HMRM_HAEIN (Multidrug resistance protein hmrM OS=Haemophilus influenzae GN=hmrM PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.557e-17 Identity = 87/364 (23.90%), Postives = 159/364 (43.68%), Query Frame = 2 Query: 32 GAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYAR---WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIKFSPKCEKTWTGFSK----EALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICGEWFPAF 1075 G+ Q+ + + + + ++ SIP+ +L + + + ++S A Y W +P+ L +C + ++ P M+ T + L+++ + I+G FG FG G ++ AI W + ++ I+ ++ E++ FS+ + L+ L LG+P A+ +C E + Y LM L P + I+LNT S +F P G A + V LGAG P A+ ++L LT ++ + I + R ++ D VI A+++ AL ++ +L G + Y+ L +Y++ G+P G WL+ KG W + F AF Sbjct: 82 GSGQHHRIAHQVRQGIWLVLGVSIPLGLLIYFCEIPLQYMQMESKMSDLARDYLHAMLWGLPAYLMLINFRCLNDGIEKTK---PAMVITFLGLLINIPLNYIFIYGKFGMPAFGAVGCGIATAIVNWA-MCLMMIFYSYTNTQERSLKVFSQLIEMPNPKTLKKLLRLGLPIAIAICCEVALYALTSLM--LSPLGATIVASHQITLNTSSFIFMFPMSIGMATTILVGQALGAGSPQNAKKIGYAALLLGLTVTIVTALITIFFRYEIASIFVTDEIVIAMAANLLLFAALYQFSDTIQMVVGGILRGYKDTKVILYITLFSYWVIGVPLGYTLGRTDWLVPHIDAKGFWIAFVVSLTFAAF 439
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_SHEON (Probable multidrug resistance protein norM OS=Shewanella oneidensis GN=norM PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.254e-16 Identity = 74/299 (24.75%), Postives = 135/299 (45.15%), Query Frame = 2 Query: 197 WLIPSILPYGLLQ-CQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCEKT--WTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 W P+ + Y +L+ C T LP M+ + V++ + + I+G FG G G ++ A+ +W +I +AIY++F K ++ F + ++ LG+P A+ + E S + + L+ L P + I+LN ++VF +P G AVS R+ LG R + + ++ ++LAL+ + + + V R +Y++D EV+ S+M + AL +V L G Y+ L +Y+ G+ +++ G G W G+I G Sbjct: 135 WGAPAFVLYQVLRGCSEGISYT----LPTMVIGFVGLAVNIPANYIFIYGHFGIPAMGGAGCGIATALVFWAMLIAMAIYMQFHKKFAALAPFSQFHRPDFATMKKMTKLGLPIAMALFFEVSLFAIIALL--LAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGYYLGRDRADISAVVAKVGLLLALSLALSTAILTVLFRFQIAELYNSDPEVVVLAGSLMLMAALYQLSDSVQVVAAGALRGYKDTRSAFYITLFSYWGIGMSLGYTLAYTDFIVPAMGAHGFWTGLIAG 427
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_PHOPR (Multidrug resistance protein norM OS=Photobacterium profundum GN=norM PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.468e-16 Identity = 81/342 (23.68%), Postives = 153/342 (44.74%), Query Frame = 2 Query: 98 SIPIAVLWAYTGKIFTTLHQDPEIS------FHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCEKTW---TGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGG--GWQNLGAYV--NLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 S+PI + G + + +P ++ HA +YA +P+ L L Q F + + +P M+ I + ++ W ++G FGF G G ++ AI YW + +Y+ + + ++ + + LR F LG P A + E S + + LM + P + + +++N S+VF +P G A+S RV + LG A++A +I+ L ++ + + + R +Y+++ +VI ++ + A+ + QV+ G G++++ A AY++ GLP G+ W++ P G G W G I G Sbjct: 99 SVPIMAILYNAGMLIDYMDVEPILAEKTIGYLHAVVYA---VPAFL---LFQTLRSFAEGLSLTVPGMVIGFIGLMANIPLNWIFVYGKFGFPEMGGVGCGVATAIVYWLMFFSMLVYVLVNKRLKRAGLFDVWYKPQPKAVLRLFK-LGFPVAASMFFEVSLFAVIALM--ISPLGSIIVASHQVAINFSSLVFMLPMSLGIALSIRVGHMLGEQDLVGAKIASHCGLIVGLIMSLMTAILTIIYREEIALLYTDNADVIVLAGQLLFLAAV----YQCSDAIQVVAAGALRGYKDMRAIFIRTFIAYWMLGLPVGYILGMTDWIVEPMGPHGFWIGNIVG 427
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_SALSV (Multidrug resistance protein mdtK OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtK PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.468e-16 Identity = 85/364 (23.35%), Postives = 154/364 (42.31%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQ-DPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLPGL*IWLLSP-----FGGKGLWKGIICG 1057 A+ Q G+ + + + + + F S+ + ++ G I ++H DP ++ A Y R L+ Y Q + P M+ + LV++ + I+G FG G G ++ A YW I + YIK + + TGF K ++ + LG+P AL + E + + + L+ + P ++ + I+LN S++F +P +AV+ RV LG G A+ A + + + + V+ + V R +Y+++ EV+ A +M + A+ +V +L G ++ AY++ GLP I L+ G G W G I G Sbjct: 67 ALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLVMIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFLGLLVNIPVNYIFIYGHFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSMRDIRNETGFGKPDSVVMKRLIQLGLPIALALFFEVTLFAVVALL--VSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTLRKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_SALPB (Multidrug resistance protein mdtK OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtK PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.468e-16 Identity = 85/364 (23.35%), Postives = 154/364 (42.31%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQ-DPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLPGL*IWLLSP-----FGGKGLWKGIICG 1057 A+ Q G+ + + + + + F S+ + ++ G I ++H DP ++ A Y R L+ Y Q + P M+ + LV++ + I+G FG G G ++ A YW I + YIK + + TGF K ++ + LG+P AL + E + + + L+ + P ++ + I+LN S++F +P +AV+ RV LG G A+ A + + + + V+ + V R +Y+++ EV+ A +M + A+ +V +L G ++ AY++ GLP I L+ G G W G I G Sbjct: 67 ALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLVMIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFLGLLVNIPVNYIFIYGHFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSMRDIRNETGFGKPDSVVMKRLIQLGLPIALALFFEVTLFAVVALL--VSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTLRKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_SALA4 (Multidrug resistance protein mdtK OS=Salmonella agona (strain SL483) GN=mdtK PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.468e-16 Identity = 85/364 (23.35%), Postives = 154/364 (42.31%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQ-DPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLPGL*IWLLSP-----FGGKGLWKGIICG 1057 A+ Q G+ + + + + + F S+ + ++ G I ++H DP ++ A Y R L+ Y Q + P M+ + LV++ + I+G FG G G ++ A YW I + YIK + + TGF K ++ + LG+P AL + E + + + L+ + P ++ + I+LN S++F +P +AV+ RV LG G A+ A + + + + V+ + V R +Y+++ EV+ A +M + A+ +V +L G ++ AY++ GLP I L+ G G W G I G Sbjct: 67 ALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLVMIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFLGLLVNIPVNYIFIYGHFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSMRDIRNETGFGKPDSVVMKRLIQLGLPIALALFFEVTLFAVVALL--VSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTLRKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: PMPM_PSEAE (Multidrug resistance protein pmpM OS=Pseudomonas aeruginosa GN=pmpM PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.615e-15 Identity = 87/343 (25.36%), Postives = 150/343 (43.73%), Query Frame = 2 Query: 80 LVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYARWL---IPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSP--KCEKTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMS---ISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 L L + AVLW + I + PE+ + +Y + + P+ Y +L+C L P M+ L+++ + LI+G FG G G + W + + ++ + + + ++ + + + +G+P + V E S + + L+ G L+ +V++ I+LN ++VF IP+ G AV+ RV + LGAG P AR A + + AL + +S+ + R +YS D VI AS++ AL +V L G + + L AY+ GLP GL W P G +GLW+G++ G Sbjct: 104 LALLIGPLSGAVLWWLSEPILGLMKVRPELIGPSLLYLKGIALGFPAAALYHVLRCYTNGL---GRTRPSMVLGIGGLLLNIPINYALIYGHFGMPKMGGPGCGWATGSVMWFMFLGMLFWVNKASIYRASQLFSRWEWPDRATIGPLVAVGLPIGIAVFAESSIFSVIALLIG-----GLDENVVAGHQIALNFSALVFMIPYSLGMAVTVRVGHNLGAGLPRDARFAAGVGMAAALGYACVSASLMLLLREQIAAMYSPDPAVIAIAASLIVFSALFQFSDALQVTAAGALRGYQDTRVTMIMTLFAYWGIGLPVGYSLGLTDWFQEPTGPRGLWQGLVVG 438
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_CITK8 (Multidrug resistance protein mdtK OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtK PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.615e-15 Identity = 84/327 (25.69%), Postives = 143/327 (43.73%), Query Frame = 2 Query: 113 VLWAYTGKIFTTLHQ-DPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIK--FSPKCEKTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLPGL*IWLLSP-----FGGKGLWKGIICG 1057 VLW G I ++H DP ++ A Y R L+ Y Q + P M+ + LV++ + I+G FG G G ++ A YW I +A Y+K S + + GFSK ++ + LG+P AL + E + + + L+ + P ++ + I+LN S++F +P +AV+ RV LG G A+ A + + + + V+ + V R +Y+++ EV+ A +M + A+ +V +L G ++ AY++ GLP I L+ G G W G I G Sbjct: 105 VLWN-AGYIIRSMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVIGFLGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFIAMASYVKRARSMRDIRNERGFSKPDTAVMKRLVQLGLPIALALFFEVTLFAVVALL--VSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGVCMAVITAIFTVTLREPIALLYNDNPEVVTLAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIG 428 The following BLAST results are available for this feature:
BLAST of DY263063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263063 ID=DY263063; Name=DY263063; organism=Citrus clementina; type=EST; length=1258bpback to top |