DY263063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_YERP3 (Multidrug resistance protein mdtK OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.862e-12 Identity = 72/298 (24.16%), Postives = 128/298 (42.95%), Query Frame = 2 Query: 197 WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 W +P L + +L+ Q L P M+ + LV++ + I+G FG G G ++ A YW +++ Y+ + + K GF+ + ++ GLG+P AL + E + + + L+ + P + + I+LN S++F +P A + RV LG G A++A + + L + + + R +Y+ EV+ + +M + AL +V +L G ++ AY+L GLP GL ++L G G W G I G Sbjct: 136 WGVPGYLFFQVLRNQCEGLSKTK---PGMVIGFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKLEKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALL--VSPLGIVAVAGHQIALNFSSLMFMLPMSLSVAATIRVGFRLGQGSVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALLYNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKDTRSIFFITFTAYWLLGLPSGYLLGLTDYILPAMGPAGFWIGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_YERE8 (Multidrug resistance protein mdtK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdtK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.294e-12 Identity = 85/348 (24.43%), Postives = 147/348 (42.24%), Query Frame = 2 Query: 62 HMLRAMLVLSFS-SIPIAVLWAYTGKIFTTLHQ-DPEISFHAGIYAR---WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIKFSPKCE--KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 H +R L+F S+ I V+ + I +H DP ++ A + W P L + +L+ Q L P M+ I LV++ + I+G FG G G ++ YW +++ Y+ + + K GF+ + ++ GLG+P AL + E + + + L+ + P + + I+LN S++F +P A + RV LG G AR+A I + L + + V R +Y+ EV+ + +M + AL +V +L G ++ AY+L GLP GL +++ G G W G + G Sbjct: 86 HQVRQGFWLAFCVSVLIMVVIYNSDHIIMRMHNIDPVLADKAVGFLHAIMWGAPGYLFFQVLRNQCEGLSKTK---PGMVIGFIGLLVNIPINYIFIYGKFGAPALGGVGCGVATGTVYWVMFLMMRWYVTRARSQQDIKLEKGFAAPDWQVMKRLGGLGLPVALALFFEVTLFAVVALL--VSPLGIVAVAGHQIALNFSSLMFMLPMSLSVAATIRVGFRLGQGSVDDARVAAYTSIAVGLMLACVTAIFTVVFREHIALLYNKTPEVVVMASHLMLLAALYQLSDAIQVIGSGVLRGYKDTRSIFFITFTAYWLLGLPSGYLLGLTDYIVPAMGPSGFWIGFVIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_BACCR (Probable multidrug resistance protein norM OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=norM PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.415e-11 Identity = 85/369 (23.04%), Postives = 152/369 (41.19%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAM-LVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVIILAIYIKFSPKCEKTWTGFS------KEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-GL*IWLLSPFGGKGLWKGIICGEWFPA 1072 A Q G+K+ + +++A+ L + S + I + + I + + + A + + I+P F+ M+ T +S ++V+ + LIFG FGF G GAA+++ +YW +II I I + ++ + F+ + +L + +FL LG+P + E S + + LM + + ++N S+++ P A++ V E+GA R A+ I I LAL +L S + +Y+ D +V + L Q L G N+ + L AY++ GLP G + + + KG W G+I G F A Sbjct: 70 ATTPIVAQLVGSKKKEDVPHVVIQAVYLAICASFVVILIGFFVVSPILNGMRLEEPVERIAAQFLSIIAIGIIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVILNYLLIFGNFGFPKLGGVGAAIASTATYWCILIITVIII----QTKEPFASFNIFKQLYRPSLSSWIAFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTI--AAHQAAMNFASLLYMTPLSLAMAMTIAVGFEVGAKRYDNAKQYGLIGIGLALAFALLYSILLYFFDDQIASIYTTDAKVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAYWIIGLPLGYILATYTEWAAKGYWIGLIIGLAFGA 432
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_PHOLL (Multidrug resistance protein mdtK OS=Photorhabdus luminescens subsp. laumondii GN=mdtK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.848e-11 Identity = 81/340 (23.82%), Postives = 145/340 (42.65%), Query Frame = 2 Query: 80 LVLSFSSIPIAVLWAYTGKIFTTLHQDPEISFHAGIYAR---WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIK--FSPKCEKTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICG 1057 L + S I IA+L+ I + DP ++ A + W P L Y +L+ Q L P M+ + + L+++ + I+G FG G G ++ A YW +++ Y+K S + + F+ L+ LG+P A+ V E + + + L+ + P + I+ N S++F P +A + RV LG AR++ I++ L L ++ ++ R +Y+++ EVI + +M AL +V +L G Y+ A+++ GLP GL +++ G +G W G I G Sbjct: 94 LAIFLSIIIIAILYNSKFLIDRQHNIDPILAEKAVGFIHAIMWGAPGYLFYQVLRNQCEGLSKTK---PGMVISFLGLLINIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLLMRWYVKRASSQRDIRPKHRFAAPEWHILKRISALGLPIAMAVFFEITLFAIVALL--ISPLGVTAVAGHQIAQNFSSLMFMFPISLAAATTIRVGYNLGKKSIENARISAYTGIMVGLVFACLTATFSIILREPIALMYNDNPEVITMASHLMLFAALYQLSDAIQVVGAGVLRGYKDTRSIFYITFIAFWILGLPSGYILGLTDYIVPAMGPQGFWIGFIIG 428
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_BORPA (Probable multidrug resistance protein norM OS=Bordetella parapertussis GN=norM PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.116e-11 Identity = 78/343 (22.74%), Postives = 140/343 (40.82%), Query Frame = 2 Query: 98 SIPIAVLWAYTGKIFTTLHQDPEISFHAGIYAR---WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFGF----GFGNKGAALSNAISY------WTNVIIL----AIYIKFSPKCEKTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSN-----DIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-GL*IWLLSPFGGKGLWKGIICG 1057 S+P +L + I + Q PE++ AG Y R W +P L + +L+ LQ + + L+ + +++V W L+FG G GA L++A++ V+ L Y F + W + L F LG+P E + + + G L P+L + +I++ SV F IP+G A + RV + GA +P A L + + +++ + A G+ + + + +V+R + + V AL ++V +L G + Y+ GLP G + + + G G+W G+ G Sbjct: 107 SVPGCLLLWHGEAILLAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVTALQRPRSAFLIALA---AIVLNVFGNWVLVFGNLGAPALGLVGAGLASALATLGLFLGMVGVVCLDRRFRRYHLFGDVWQPDW--------QRLAEFWKLGLPIGAATAFEVTIFNAAAFLMGWLGEPEL--AAHAIAIQIASVTFMIPYGIAQAATVRVGHAYGARQPDQVARAGWCAFSLGIGSMAIAAALMLLAPGLLVSAFLDIGDPANAQVLRLATAYLAVAALFQIVDGAQVLGAGMLRGLHDTRVPMLYAALGYWGVGLPSGAALAFWAGWRGVGVWSGLAIG 436
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_BORBR (Probable multidrug resistance protein norM OS=Bordetella bronchiseptica GN=norM PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.116e-11 Identity = 78/343 (22.74%), Postives = 140/343 (40.82%), Query Frame = 2 Query: 98 SIPIAVLWAYTGKIFTTLHQDPEISFHAGIYAR---WLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFGF----GFGNKGAALSNAISY------WTNVIIL----AIYIKFSPKCEKTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSN-----DIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-GL*IWLLSPFGGKGLWKGIICG 1057 S+P +L + I + Q PE++ AG Y R W +P L + +L+ LQ + + L+ + +++V W L+FG G GA L++A++ V+ L Y F + W + L F LG+P E + + + G L P+L + +I++ SV F IP+G A + RV + GA +P A L + + +++ + A G+ + + + +V+R + + V AL ++V +L G + Y+ GLP G + + + G G+W G+ G Sbjct: 107 SVPGCLLLWHGEAILLAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVAALQRPRSAFLIALA---AIVLNVFGNWVLVFGNLGAPALGLVGAGLASALATLGLFLGMVGVVCLDRRFRRYHLFGDVWQPDW--------QRLAEFWKLGLPIGAATAFEVTIFNAAAFLMGWLGEPEL--AAHAIAIQIASVTFMIPYGIAQAATVRVGHAYGARQPDQVARAGWCAFSLGIGSMAIAAALMLLAPGLLVSAFLDIGDPANAQVLRLATAYLAVAALFQIVDGAQVLGAGMLRGLHDTRVPMLYAALGYWGVGLPSGAALAFWAGWRGVGVWSGLAIG 436
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: NORM_BACHD (Probable multidrug resistance protein norM OS=Bacillus halodurans GN=norM PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.376e-11 Identity = 79/360 (21.94%), Postives = 149/360 (41.39%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYT-GKIFTTLHQDPEISFHAGIYARWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FGF---GNKGAALSNAISYWTNVII-LAIYIKFSPKCE-KTWTGFSKEALENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMSISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSSIAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-GL*IWLLSPFGGKGLWKGIICG 1057 A+ Q+ GA++ + L+ + + SI + ++ A I + + + E+ A Y L I+P + + + M T +S +++ + LIFG GF G GA ++AI+YW + + + + +K P + + + +L+ + L LG+P + E S + + L+ + + ++N S ++ IP ++ V E+GA R AR ++ I AL G++ I R +Y+ND +V + + Q +L G N+ + L ++++ GLP G + SP G G W G+I G Sbjct: 70 ALTPIIAQSIGAEKRDDVPYVFLQGLYLSIAISIAVILIGAVVLDPILSAMSLEDEVGRIAKEYLIGLAFGIVPLFIYTTIRCLIDSLGETRVTMFITLLSLPINIFFNYVLIFGKLGFPRLGGVGAGYASAITYWFILAVAIVVVVKVRPFTDFQLFKKLYHVSLKKWKEILLLGLPIGFTIFFETSIFAAVTLLMSTFDTATI--AAHQAAVNFASFLYMIPLSIAFTLTIAVGYEVGAKRVEDARQYSRLGITFALIMGLVAGVIIYVLRAPVASLYTNDSQVAWLIQQFLIYSIFFQLSDALATPIQGVLRGHKDVNVPFVMALVSFWIIGLPTGYLLANFSPLGPYGYWIGLITG 427
BLAST of DY263063 vs. ExPASy Swiss-Prot
Match: MDTK_PROMH (Multidrug resistance protein mdtK OS=Proteus mirabilis (strain HI4320) GN=mdtK PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.021e-11 Identity = 94/389 (24.16%), Postives = 163/389 (41.90%), Query Frame = 2 Query: 2 AVETFCGQAFGAKQYRMMGVHMLRAMLVLSFSSIPIAVLWAYTGKIFTTLHQ-DPEISFHA--GIYA-RWLIPSILPYGLLQCQHRFLQTQNNILPLMLSTGISTLVHVLSCWTLIFG-FG---FGNKGAALSNAISYWTNVIILAIYIKFSPKCEKTWTGFSKEAL-----ENLRSFLGLGIPSALMVCLEFSSYEFLVLMSGLLPNPKLETSVMS--ISLNTISVVFRIPFGFGSAVSTRVSNELGAGRPYAARLAVQIVIILALTEGVLLSS----IAVAARGIWGYVYSNDIEVIRYMASIMPVLALSNSWMESRVYFQVLLEGGGWQNLGAYVNLEAYYLKGLP-----GL*IWLLSPFGGKGLWKGIICGEWFPAFGL*SLLW 1096 A+ Q G+ Q + + + + +F SI + + + I H +PE++ A I+A W P L Y +L+ Q L P M+ I L+++ + I+G FG G G ++ A +W +++ Y++ +P K+ L ++ LG+P L + E + L + LL +P T+V S I+LN S++F P G A + RV LG AR + I AL G++L+S ++ R +Y+++IEV+ + +M AL +V +L G ++ AY++ GLP G +++ G G W G I G A + + +W Sbjct: 67 ALTPIVAQLNGSGQRKHIANRTQQGFWLATFLSIMVIAILYNSRFIIEAQHDIEPELAEKAIGFIHAIMWGAPGCLYYQVLRSQCEGLSKTK---PGMIIGFIGLLINIPVNYAFIYGKFGAPQLGGIGCGVATASVFWAMFLMMRYYVRRAPTQRDV---MPKKRLVLPEFHTIKRITLLGLPVGLALFFEVT----LFAVVALLVSPLGVTAVASHQIALNFSSLMFMFPLSLGIAATIRVGYNLGQRSTEQARTSA----ITALAVGLMLASCTAIFSIIFREKIALMYNDNIEVVTLASHLMLFAALYQLSDSVQVIGSGVLRGYKDTRSIFFITFIAYWVIGLPSGYLLGRTDYIVEAMGPAGFWIGFILGLTASAIMMGTRIW 441 The following BLAST results are available for this feature:
BLAST of DY263063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263063 ID=DY263063; Name=DY263063; organism=Citrus clementina; type=EST; length=1258bpback to top |