DY263108

Overview
NameDY263108
Unique NameDY263108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.886e-15
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 1
Query:  694 EHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVNFK 900
            +HY+GVR RPWG++AAEI DP   G RVWLGT+DT   AA  YDRAAY++  S+A  +FP  L   NFK
Sbjct:  136 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFP--LEVANFK 202          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.629e-15
Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  700 YKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            Y+GVR RPWG+YAAEI D + +G RVWLGT+DT E AA  YDRAAY M    A  +FPH
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 1
Query:  694 EHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVNFK 900
            +HY+GVR RPWG++AAEI DP   G RVWLGT+DT   AA  YDRAA+++  S+A  +FP  L   NFK
Sbjct:  143 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFP--LEVANFK 209          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.477e-14
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  700 YKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            Y+GVR RPWG+YAAEI D   +GARVWLGT++T E AA  YDRAA+ M   RA  +FPH
Sbjct:   14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPH 72          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.477e-14
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1
Query:  670 RDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFP 873
            +D+   +  HY+GVR RPWG++AAEI DPK   ARVWLGT++T E AAL YD AA +   S+AK +FP
Sbjct:   80 QDQGDLRRRHYRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.519e-14
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  700 YKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            Y+GVR RPWG+YAAEI D + +G RVWLGT+DT E AA  YD+AAY M    A  +FPH
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.519e-14
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  652 TAGLAARDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFP 873
            T     ++ DQ    HY+GVR RPWG+YAAEI DP   G RVWLGT+DT   AA  YD+AA+++  S+A  +FP
Sbjct:   59 TTAPVVQENDQ---RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.297e-14
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  661 LAARDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRV 891
            ++ +   + +  HY+GVR RPWG+YAAEI DP   G R+WLGTYDT   A   YD+AA+++   +A  +FP L VRV
Sbjct:   75 VSTKTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP-LDVRV 150          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.612e-14
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 1
Query:  670 RDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFP 873
            +D+   +  HY+GVR RPWG++AAEI DP+   ARVWLGT++T E AAL YD AA +   S+AK +FP
Sbjct:   82 QDQGLLRKRHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.330e-14
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 1
Query:  685 AKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFP 873
            A+  HY+GVR RPWGRYAAEI DP     RVWLGT+DTPE AAL YD AA  +   +AK +FP
Sbjct:    7 AREVHYRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68          
The following BLAST results are available for this feature:
BLAST of DY263108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ERF5_NICSY3.886e-1557.97Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF97_ARATH6.629e-1562.71Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF5_TOBAC1.131e-1456.52Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF95_ARATH1.477e-1462.71Ethylene-responsive transcription factor ERF095 OS... [more]
EF114_ARATH1.477e-1455.88Ethylene-responsive transcription factor ERF114 OS... [more]
ERF96_ARATH2.519e-1461.02Ethylene-responsive transcription factor ERF096 OS... [more]
EF105_ARATH2.519e-1451.35Ethylene-responsive transcription factor ERF105 OS... [more]
EF104_ARATH4.297e-1448.05Ethylene-responsive transcription factor ERF104 OS... [more]
EF115_ARATH5.612e-1454.41Ethylene-responsive transcription factor ERF115 OS... [more]
ERF81_ARATH7.330e-1461.90Ethylene-responsive transcription factor 12 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263108 ID=DY263108; Name=DY263108; organism=Citrus clementina; type=EST; length=1331bp
ATCGGTTTGAAATTAAACTGAAATCGATATATTCTCACTTCTCACACGTG
GGCTGTCTCACGTCCACTTGCGAAAAAATAAATTTTCACTTGTAATTTTT
CAGAAATGTATTCGGAAAGTATTTCTCAAACGGATATGGCTCTCTTGGAG
TCAATCCGGCATCATCTTCTAGATGATGACTTCGAAGACATAAATTCAAT
GATGCAACCACTACAAGTAGAAAACGTTAATTCATCAATATTGCAACAGC
ACCAGCACCGGCAGCAACATCAGCAGCAGCAAATGCCTCTAGAAAATTTT
TCATAATCAGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAACAC
AACCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGTACT
CACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAAGTA
ACACGTAAGGTTGTTATTAACAATAACAACAACTACCCAATCCCTTCCTA
TGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCGTGG
GTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCAATA
AGCGAAACCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCACCA
TACGGCGGGGTTGGCAGCACGTGATCGTGATCAAGCGAAGGTGGAGCATT
ACAAGGGGGTGAGGACGAGGCCATGGGGGAGATATGCGGCTGAGATTATA
GACCCTAAGAATAACGGGGCACGTGTTTGGCTTGGCACTTATGATACCCC
TGAGGGCGCAGCCTTGTGCTATGATAGAGCCGCGTACGAGATGCATGACT
CTAGAGCTAAGCATGATTTTCCTCACTTACTTGTCAGGGTTAATTTTAAG
CTCGTTCGTGTCAACACGACCCACACCACTAAGCGTGTCTCACCAGAGTC
CGAGGCTGAACTTTCTTCTAACTCTTCATCATCATCCCCTTCTTCGACTA
CTTCTTCACCGTCATCTTTTGTTAATGGTGGCCGGAAGATTCCCCAAACC
CTAACCGAAAAAAGAACAAGGGGACAAACCGCGGTGGCTTGATCCTAAAA
CCTGAACCTGGAACCCGGTCCTCTCCAATAAAAAAAAAAAGGGAAACGAG
CAAAAAGGGGGGAAACCCCCTCCCGGGCAACCTAAACCGAAACCTTTTCC
CAAAAATTTATTCTTTAAAAAATTTAATTTTGGTGCCCGCCTTTTTCTTC
ATCTTTAAAAAAAAGAAAGCGAGACCCCCCGTGGGGGTTGTTGAGGTAAA
ACCCCTTTTTTTTTGTTTTATAATTTTATTA
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