DY263122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PELE2_ERWCH (Pectate lyase E OS=Erwinia chrysanthemi GN=pelE PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.278e-15 Identity = 59/173 (34.10%), Postives = 83/173 (47.98%), Query Frame = 2 Query: 470 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNL----------EFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 895 RS +S+ S TI G G + K T L +K +VI+ NL +E G G + DA+ I + H+W+D ++ D DG +DI R S +TVS F HDKT+LIG ++ + +RVT H+ FD +R PRVR+ VH YNN Sbjct: 121 RSQISIPSNTTIIGIGNKGKFTNGSLVVKGVSNVILRNLYIETPVDVAPHYEEGDGWNAEWDAVVID-STDHVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGSLDIKRGSDYVTVSNSRFELHDKTILIGHSDNNGSQDAGKLRVTFHNNLFDRVGERTPRVRFGSVHAYNN 292
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PELA_EMENI (Pectate lyase OS=Emericella nidulans GN=pelA PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.976e-15 Identity = 66/195 (33.85%), Postives = 96/195 (49.23%), Query Frame = 2 Query: 341 GGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSL-------RDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY 898 GG G VT LAD L E PL I+ VSG+I + + V+S KTI G +TG G ++ +VI+ NL+ + DAI I S ++W+D C L +D DGL+DI+ + ITVS +F H K LIG ++ + + VT + ++ R P +R+A VH+ NNY Sbjct: 49 GGAAGDTVTVTNLAD-----LTEAAESDGPLTII--VSGSISGSAKIRVASDKTIFGESGS-SITGIGFYIRRVSNVIMRNLKISKVDADNGDAIGIDASS-NVWVDHCDLSGDLSGGKDDLDGLVDISHGAEWITVSNTYFHDHWKGSLIGHSDNNEDEDLGHLHVTYANNYWYNVYSRTPLIRFATVHIINNY 234
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PELE1_ERWCH (Pectate lyase E OS=Erwinia chrysanthemi GN=pelE PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.290e-14 Identity = 57/173 (32.95%), Postives = 82/173 (47.40%), Query Frame = 2 Query: 470 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNL----------EFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 895 RS +S+ S TI G G K T L +K ++VI+ NL +E G G + DA I S ++W+D ++ D DG +DI + S +T+S F HDKT+LIG S+ + +RVT H+ FD +R PRVR+ +H YNN Sbjct: 103 RSQISIPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID-NSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFGSIHAYNN 274
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PELD_ERWCH (Pectate lyase D OS=Erwinia chrysanthemi GN=pelD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.612e-14 Identity = 58/173 (33.53%), Postives = 80/173 (46.24%), Query Frame = 2 Query: 470 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNL----------EFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 895 RS +SV S TI G G K T L +K +VI+ NL +E G G + DA I S +W+D ++ D DG +DI + S +T+S F HDKT+LIG S+ + +RVT H+ FD +R PRVR+ +H YNN Sbjct: 109 RSQISVPSNTTIIGIGSNGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYEEGDGWNAEWDAAVID-NSTRVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTISSSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNN 280
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PEL_BACSU (Pectate lyase OS=Bacillus subtilis GN=pel PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.638e-13 Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 2 Query: 470 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GGKGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY 898 R + + + TI G G K+ G ++K ++VII N+EF+ G D I I + HIWID C+ D + DG D + + IT+S ++ HDK+ + G+ S +D +++T+HH + QR PRVR+ +VH+YNNY Sbjct: 141 RVMVDIPANTTIVGSGTNAKVVGGNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNY 315
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PEL_PSEMA (Pectate lyase OS=Pseudomonas marginalis GN=pel PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.960e-12 Identity = 57/222 (25.68%), Postives = 92/222 (41.44%), Query Frame = 2 Query: 335 AIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GGKGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY 898 A G +G + +T + D G V+ + + +R L + TI G G ++ KE + VII N+ E G + D + ++ + ++W+D + D + DG +D+ + +T+S F SH+K LIG+ S D ++VTIH+ F+ R PRVRY +VHLYNNY Sbjct: 74 ASAGSNGRIIKITGIIDVSEGK-------------VYTKTADMKVRGRLDIPGKTTIVGIGSNAEIREGFFYAKEND-VIIRNITVENPWDPEPIFDKDDGADGNWNSEYDGLTVEG-ANNVWVDHVTFTDGRRTDDQNGTEHERPKQHHDGALDVKNGANFVTISYSVFKSHEKNNLIGSSDSRTTDDGKLKVTIHNTLFENISARAPRVRYGQVHLYNNY 280
BLAST of DY263122 vs. ExPASy Swiss-Prot
Match: PEL_PSEFL (Pectate lyase OS=Pseudomonas fluorescens GN=pel PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.447e-11 Identity = 55/219 (25.11%), Postives = 90/219 (41.10%), Query Frame = 2 Query: 344 GLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GGKGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY 898 G +G + +T + D G + + + +R L + TI G ++ L KE + VII N+ E G + D + I+ + ++W+D + D + DG +D+ + +T+S F SH+K LIG+ S D ++VTIH+ F+ R PRVR+ +VHLYNNY Sbjct: 77 GANGRIIKITGIIDISEGK-------------AYTTTADMKVRGRLDIPGKTTIVGTTSNAEIREGFLYAKEND-VIIRNITIENPWDPEPKWDPTDGSAGNWNSEYDGLTIEG-ANNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKNGANYVTISYSAFKSHEKNNLIGSSDSRTTDDGKLKVTIHNTLFENISARAPRVRFGQVHLYNNY 280 The following BLAST results are available for this feature:
BLAST of DY263122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263122 ID=DY263122; Name=DY263122; organism=Citrus clementina; type=EST; length=1332bpback to top |