DY263125 | Citrus Genome Database

Overview


Name	DY263125
Unique Name	DY263125
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1337

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 478.404 bits (1230), Expect = 4.176e-134
Identity = 241/331 (72.81%), Postives = 261/331 (78.85%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIHIGQAGIQVGN+CWELYCLEHGI PDG MP D T+G   DAFNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSL+IERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHFMLSSYAPVISAEKA            + FEP+SMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 478.404 bits (1230), Expect = 4.176e-134
Identity = 244/331 (73.72%), Postives = 259/331 (78.25%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIHIGQAGIQVGN+CWELYCLEHGI  DG MP D TIG   DAFNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVD+ EFQ NLVPYPRIHFMLSSYAPVISAEKA            + FEPSSMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 478.404 bits (1230), Expect = 4.176e-134
Identity = 241/331 (72.81%), Postives = 260/331 (78.55%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE+ISIHIGQAGIQVGN+CWELYCLEHGI PDG MPSD TIG   DAFNTFFSET AG+HVPR +F+DLEPTV+DEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDL LDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVDITEFQ NLVPYPRIHFMLSSYAP+ISAEKA            A FEP+SMM +  P+    HG    C   Y G   P++
Sbjct:    1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1)

HSP 1 Score: 478.019 bits (1229), Expect = 5.454e-134
Identity = 243/331 (73.41%), Postives = 259/331 (78.25%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIHIGQAGIQVGN+CWELYCLEHGI  DG MP D TIG   DAFNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVD+ EFQ NLVPYPRIHFMLSSYAPVISAEKA            + FEPSSMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 478.019 bits (1229), Expect = 5.454e-134
Identity = 240/331 (72.51%), Postives = 260/331 (78.55%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE+ISIHIGQAGIQVGN+CWELYCLEHGI PDG MPSD TIG   DAFNTFFSET AG+HVPR +F+DLEPTV+DEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDL LDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHFMLSSYAP+ISAEKA            A FEP+SMM +  P+    HG    C   Y G   P++
Sbjct:    1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 478.019 bits (1229), Expect = 5.454e-134
Identity = 243/331 (73.41%), Postives = 259/331 (78.25%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIHIGQAGIQVGN+CWELYCLEHGI  DG MP D TIG   DAFNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVD+ EFQ NLVPYPRIHFMLSSYAPVISAEKA            + FEPSSMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1)

HSP 1 Score: 477.633 bits (1228), Expect = 7.123e-134
Identity = 239/331 (72.21%), Postives = 262/331 (79.15%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE+ISIH+GQ GIQVGN+CWEL+CLEHGI PDG MPSD TIG   DAFNTFFSET AG+HVPRAVF+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFN+V                 VDYGKKSKLGFTIYPSPQVSTAVVEPYNS+LSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVDITEFQ NLVPYPRIHFMLSSYAP+ISAEKA            + FEP++MMA+  P+    HG    C   Y G   P++
Sbjct:    1 MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPR----HGKYMACSMMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA_TETPY (Tubulin alpha chain OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 477.633 bits (1228), Expect = 7.123e-134
Identity = 239/331 (72.21%), Postives = 262/331 (79.15%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE+ISIH+GQ GIQVGN+CWEL+CLEHGI PDG MPSD TIG   DAFNTFFSET AG+HVPRAVF+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVFN+V                 VDYGKKSKLGFTIYPSPQVSTAVVEPYNS+LSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVDITEFQ NLVPYPRIHFMLSSYAP+ISAEKA            + FEP++MMA+  P+    HG    C   Y G   P++
Sbjct:    1 MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPR----HGKYMACSMMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 476.478 bits (1225), Expect = 1.587e-133
Identity = 241/331 (72.81%), Postives = 261/331 (78.85%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIHIGQAGIQVGN+CWELYCLEHGI PDG MPSD T+G   DAF TFFSET AG+HVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVF+AV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNR             RFDGA+NVD+TEF+ NLVPYPRIHFMLSSYAPVISAEKA            + FEPSSMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFYTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFRTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1)

HSP 1 Score: 476.093 bits (1224), Expect = 2.072e-133
Identity = 236/331 (71.30%), Postives = 264/331 (79.76%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE+ISIHIGQAG+QVGN+CWELYCLEHGI PDG+MPSD TIGV  DAFNTFFSET AG+HVPRAVF+DLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDLCLDR+RKL+DNCTGLQGFLVF++V                 VDYGKKSKLGFT+YPSPQV+TAVVEPYNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHFML SYAPVISAEKA            + FEP+SMMA+  P+    HG    C   Y G   P++
Sbjct:    1 MREVISIHIGQAGVQVGNACWELYCLEHGIQPDGLMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPR----HGKYMACCLMYRGDVVPKD 327

The following BLAST results are available for this feature:

BLAST of DY263125 vs. ExPASy Swiss-Prot

BLAST of DY263125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424


Match Name	E-value	Identity	Description
TBA6_ARATH	4.176e-134	72.81	Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=T...	[more]
TBA1_ELEIN	4.176e-134	73.72	Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 ...	[more]
TBA1_CHLRE	4.176e-134	72.81	Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii...	[more]
TBA2_MAIZE	5.454e-134	73.41	Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV...	[more]
TBA1_VOLCA	5.454e-134	72.51	Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN...	[more]
TBA1_MAIZE	5.454e-134	73.41	Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV...	[more]
TBA_TETTH	7.123e-134	72.21	Tubulin alpha chain OS=Tetrahymena thermophila PE=...	[more]
TBA_TETPY	7.123e-134	72.21	Tubulin alpha chain OS=Tetrahymena pyriformis PE=3...	[more]
TBA1_GOSHI	1.587e-133	72.81	Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA1_NAEGR	2.072e-133	71.30	Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=...	[more]

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Properties


Property Name	Value
Genbank description	IC0AAA10DE07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY263125 ID=DY263125; Name=DY263125; organism=Citrus clementina; type=EST; length=1337bp
CAAGATCATTTTCGCCGGTTTTTGAGATCGAACAACGTGGTTTAGCTTTA
AAGTGTAGGGGAACAGAAAGCAAAAGGGAGGAAATTAGGGTTCTTGGGCT
TGTGGGTATTTTGAAAAAGGCAAAGAAATGAGAGAAATTATAAGTATACA
CATTGGGCAAGCTGGGATTCAAGTGGGGAATTCATGCTGGGAGCTTTATT
GCCTAGAACATGGCATTCATCCTGATGGCATGATGCCCAGTGACAATACA
ATAGGTGTAGCCCATGATGCCTTCAATACATTCTTCAGTGAAACCAGTGC
TGGCAGGCATGTGCCCAGAGCTGTGTTTGTTGATCTTGAACCAACTGTCA
TTGATGAAGTTAGAACGGGTAGCTACCGCCAGCTTTTCCACCCAGAGCAG
CTTATCTCTGGCAAGGAAGATGCTGCTAACAATTTTGCAAGAGGGCATTA
TACTGTTGGGAAGGAAATTGTGGATCTTTGCCTTGATCGTGTTCGAAAGT
TATCTGATAACTGCACTGGGTTGCAAGGGTTTTTGGTGTTCAATGCTGTT
GGGGGTGGTACTGGTTCCGGTCTGGGGTCGTTGTTACTGGAACGCCTATC
TGTAGATTATGGAAAGAAGTCAAAGCTTGGCTTCACTATCTACCCTTCTC
CTCAGGTATCAACAGCAGTTGTGGAGCCTTATAACAGTGTTCTGTCTACT
CATTCCCTTCTTGAACACACAGATGTTGCTGTGCTATTGGACAATGAAGC
TATTTATGACATCTGCAGGAGATCCCTAGATATTGAGAGGCCAACTTACA
CTAATTTGAATCGATTGATATCTCAAATCATATCATCTTTGACAACTTCA
TTGAGGTTTGATGGAGCTATTAATGTTGATATTACAGAGTTCCAGAACAA
CCTTGTACCGTATCCTCGTATCCATTTCATGCTTTCATCATATGCCCCTG
TCATCTCTGCTGAAAAAGCTACCATGAACAGCTTTCAGTTTCCGAGATCA
CAAATGGCATTCTTTGAGCCCTCAAGCATGATGGCCCAAATGTGACCCCA
GGCCCGGGAAATACATGGGCTTGCTGCTTGATGTTACGGAGGAATATGTT
TCCCCCAGGAATGTTTATGGCCGCCTGTTCCCCCTTTAAAAAACCAAAAG
GGACCGGGCCAATTTTTTTGACCGGGGGGCCCACGTGGCTTTCTCAAGGG
GGGTTATAAAATAACCCCCCCTCCCACCTGTTTTGTTCCCTGGGGAGGGG
AGCCCCGGCGCCCAGGGGTTTCCCCCACACACCTGGTTTTTGGTTTGATA
TAACAAACACACCAACCCCCCAACAAACCAGGTGGTG