DY263125 | Citrus Genome Database

Overview


Name	DY263125
Unique Name	DY263125
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1337

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1A_MOUSE (Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1A_HUMAN (Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1A_CRIGR (Tubulin alpha-1A chain OS=Cricetulus griseus GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 5.657e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1C_RAT (Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 7.388e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 7.388e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 7.388e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

[Close]

BLAST of DY263125 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 7.388e-123
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 2

Query:  128 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQNNLVPYPRIHFMLSSYAPVISAEKATMNSFQFPRSQMAFFEPSSMMAQM*PQAREIHGLAA*C---YGGICFPQE 1111
            MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG   D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++                  VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQ NLVPYPRIHF L++YAPVISAEKA            A FEP++ M +  P+    HG    C   Y G   P++
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPR----HGKYMACCLLYRGDVVPKD 327

The following BLAST results are available for this feature:

BLAST of DY263125 vs. ExPASy Swiss-Prot

BLAST of DY263125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424


Match Name	E-value	Identity	Description
TBA1B_BOVIN	5.657e-123	65.86	Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2	[more]
TBA1A_RAT	5.657e-123	65.86	Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tub...	[more]
TBA1A_PANTR	5.657e-123	65.86	Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1...	[more]
TBA1A_MOUSE	5.657e-123	65.86	Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a P...	[more]
TBA1A_HUMAN	5.657e-123	65.86	Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A P...	[more]
TBA1A_CRIGR	5.657e-123	65.86	Tubulin alpha-1A chain OS=Cricetulus griseus GN=TU...	[more]
TBA1C_RAT	7.388e-123	65.86	Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tub...	[more]
TBA1C_MOUSE	7.388e-123	65.86	Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c P...	[more]
TBA1C_HUMAN	7.388e-123	65.86	Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C P...	[more]
TBA1C_CRIGR	7.388e-123	65.86	Tubulin alpha-1C chain OS=Cricetulus griseus GN=TU...	[more]

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Properties


Property Name	Value
Genbank description	IC0AAA10DE07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY263125 ID=DY263125; Name=DY263125; organism=Citrus clementina; type=EST; length=1337bp
CAAGATCATTTTCGCCGGTTTTTGAGATCGAACAACGTGGTTTAGCTTTA
AAGTGTAGGGGAACAGAAAGCAAAAGGGAGGAAATTAGGGTTCTTGGGCT
TGTGGGTATTTTGAAAAAGGCAAAGAAATGAGAGAAATTATAAGTATACA
CATTGGGCAAGCTGGGATTCAAGTGGGGAATTCATGCTGGGAGCTTTATT
GCCTAGAACATGGCATTCATCCTGATGGCATGATGCCCAGTGACAATACA
ATAGGTGTAGCCCATGATGCCTTCAATACATTCTTCAGTGAAACCAGTGC
TGGCAGGCATGTGCCCAGAGCTGTGTTTGTTGATCTTGAACCAACTGTCA
TTGATGAAGTTAGAACGGGTAGCTACCGCCAGCTTTTCCACCCAGAGCAG
CTTATCTCTGGCAAGGAAGATGCTGCTAACAATTTTGCAAGAGGGCATTA
TACTGTTGGGAAGGAAATTGTGGATCTTTGCCTTGATCGTGTTCGAAAGT
TATCTGATAACTGCACTGGGTTGCAAGGGTTTTTGGTGTTCAATGCTGTT
GGGGGTGGTACTGGTTCCGGTCTGGGGTCGTTGTTACTGGAACGCCTATC
TGTAGATTATGGAAAGAAGTCAAAGCTTGGCTTCACTATCTACCCTTCTC
CTCAGGTATCAACAGCAGTTGTGGAGCCTTATAACAGTGTTCTGTCTACT
CATTCCCTTCTTGAACACACAGATGTTGCTGTGCTATTGGACAATGAAGC
TATTTATGACATCTGCAGGAGATCCCTAGATATTGAGAGGCCAACTTACA
CTAATTTGAATCGATTGATATCTCAAATCATATCATCTTTGACAACTTCA
TTGAGGTTTGATGGAGCTATTAATGTTGATATTACAGAGTTCCAGAACAA
CCTTGTACCGTATCCTCGTATCCATTTCATGCTTTCATCATATGCCCCTG
TCATCTCTGCTGAAAAAGCTACCATGAACAGCTTTCAGTTTCCGAGATCA
CAAATGGCATTCTTTGAGCCCTCAAGCATGATGGCCCAAATGTGACCCCA
GGCCCGGGAAATACATGGGCTTGCTGCTTGATGTTACGGAGGAATATGTT
TCCCCCAGGAATGTTTATGGCCGCCTGTTCCCCCTTTAAAAAACCAAAAG
GGACCGGGCCAATTTTTTTGACCGGGGGGCCCACGTGGCTTTCTCAAGGG
GGGTTATAAAATAACCCCCCCTCCCACCTGTTTTGTTCCCTGGGGAGGGG
AGCCCCGGCGCCCAGGGGTTTCCCCCACACACCTGGTTTTTGGTTTGATA
TAACAAACACACCAACCCCCCAACAAACCAGGTGGTG