DY263273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.128e-54 Identity = 118/289 (40.83%), Postives = 168/289 (58.13%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWA---CKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGF-ARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQG 990 G+TDS K+ AWA ACG TI +P G +L+ + F G CK D+TI++DG L+A D NWI V + I G G L+GQG +W+ C K + + + F N+ V +G+ ++S+ FH+ + C ++ ++ V V+A GDSPNTDGIH+ SSG+TI ++ IG GDDC+S+GPG + + I V CGPGHGISIGSLG+ + E V ++ V T T GVRIK++ +S I +++ M + NPI ID KYCP N+ C G Sbjct: 52 GKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKG-DVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEV--SGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCP-NKLCTANG 336
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.629e-53 Identity = 112/289 (38.75%), Postives = 172/289 (59.52%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWA--CKKSDNS---NCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQ 987 G+ DS ++F W AC A A + ++ ++N+VF+G C+ + ++ ++DGT+VA D N++ W+ F ++ ++ G GV++GQG WA CK + N + T ++ S +V + L ++S FH+V C VK+QG+K+ A DSPNTDGI + AS I IGTGDDC+++G G++N+ I+++ CGPGHGISIGSLG++ A V +V V F TQNG+RIK+W + SG A I +++ M N +NPI+I+Q YC C Q Sbjct: 70 GKHDSTEAFATTWNAACKKASAVLLVPANKKFFVNNLVFRGPCQPH-LSFKVDGTIVAQPDPARWKNSKIWLQFAQLTDFNLMGTGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTW-QGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQ 356
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 4.740e-53 Identity = 114/284 (40.14%), Postives = 158/284 (55.63%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGR-YLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGG-VLEGQGAGLW--ACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDC 978 G+T +F AW +AC S VP + YLL + F G C+++ I+++I G+L A + + WI F+ V + + GG + G G W +CK + + C T L F N N+ +N L S ++Q HI C +V + ++A+ SPNTDG+HV + + I D+ IGTGDDC+S+ G+ N+ N+ CGPGHGISIGSLG EA V NVTV G +NGVRIK+W + SG A NI F + M +V PIIIDQ YC E C Sbjct: 87 GKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQITFSGPCRSS-ISVKIFGSLEASSKISDYKDRRLWIAFDSVQNLVVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTW-QGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPC 368
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.379e-52 Identity = 111/289 (38.41%), Postives = 168/289 (58.13%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWA--CKKSDNS---NCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQ 987 G+ D ++F AW AC A + +++++N+ F G C+ + T ++DG + A + N W+ F ++G ++ G GV++GQG WA CK + N T ++F S ++I GL ++S FH+V C VK+ G+ ++A DSPNTDGI + AS + + IGTGDDCV++G G++N+ IE++ CGPGHGISIGSLG+E A V V V F TQNG+RIK+W + SG A +I++++ M N +NPI+I+Q YC C Q Sbjct: 70 GKHDCTEAFSTAWQAACKKPSAMLLVPGNKKFVVNNLFFNGPCQPH-FTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTW-QGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQ 356
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 4.436e-51 Identity = 106/282 (37.59%), Postives = 156/282 (55.32%), Query Frame = 1 Query: 136 PGQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGG-VLEGQGAGLWACKKSDNS-NCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSW-GRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENE 972 P +D + L A+ AC + + + +P G + L V G CK+ I + G + D + W++FE ++G +NGG +G+G W + C ++RF DN I + S+D++ FH + ++ +K+ A +SPNTDGIH+ GV IL++KI TGDDC+SVG G NL IE V CGPGHGIS+GSLG+ E V ++TV + T GT NG+RIK+W + A I F+ ++N V NPI+IDQ+YCP N+ Sbjct: 30 PPNSDITAAVLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKS-PIEFTLQGNV--KTDGGSTQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQ 308
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.285e-51 Identity = 109/289 (37.72%), Postives = 166/289 (57.44%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWA--CKKSDNS---NCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQ 987 G+ DS +F W AC A + +++++N+VF G C+ + + ++DGT+ A D N++ W+ F ++ ++ G GV++GQG W+ CK + N T ++ S +V + L +S FH+V C+ VK+QG+K+ A DSPNTDGI + AS I IGTGDDCV+VG G++N+ I+++ CGPGHG+SIGSLGK + V V + F TQNG+RIK+W + SG A +I +++ M N +NPI+I+Q YC C Q Sbjct: 71 GKHDSTDAFEKTWNAACNKLSAVFLVPANKKFVVNNLVFYGPCQPH-FSFKVDGTIAAYPDPAKWKNSKIWMHFARLTDFNLMGTGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTW-QGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQ 357 HSP 2 Score: 23.0978 bits (48), Expect = 6.285e-51 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 983 DRASGVKISGVIYQDIHGT 1039 ++ S VKI V +++IHGT Sbjct: 356 NQRSAVKIQDVTFKNIHGT 374
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.976e-47 Identity = 102/292 (34.93%), Postives = 161/292 (55.14%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLV---APADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLW--ACKK------SDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDC 978 G D +F AW AC + G + +++ +F G CK + ++DG L+ P ++ N W++F + G + +G G +EG G W CK S +S + T +RF S+N+ + GL +S FH+ +GC V + +++S+ SPNTDGIH+ + V I +S + GDDC+S+G G +++ I+ V CGP HGISIGSLG +A V N+TV + + NG+R+K+W + +G N+LF++ M NV N II+DQ YC +++DC Sbjct: 91 GSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGPCKPG-LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENIQMENVLNCIIVDQYYC-QSKDC 379
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLRX_ASPTU (Exopolygalacturonase OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.303e-18 Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 529 QMFHIVINGCNDVKVQGVKVS----AAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAG-VQNVTVTSVTFTGTQNGVRIKSW------------GRTSSGFARNILFQHALMNNVDNPIIIDQKYCPEN 969 Q +H V N N V G+ +S + ++ NTDG S+ + I +S I GDDCVS P +TN+ ++N+ C HGIS+GSLG+ + E V+NV V +++ + RIK W G SG +NI + AL++NVD I I Q Y +N Sbjct: 191 QYYHFVANSSN-VLFDGIDISGYSKSDNEAKNTDGWDTYRSNNIVIQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQYKDEVDIVENVYVYNISMFNASDMARIKVWPGTPSALSADLQGGGGSGSVKNITYDTALIDNVDWAIEITQCYGQKN 353
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.222e-18 Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 472 LRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSV----GPGAT-NLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKY-CPENEDCPGQGFGG*NQWSDI 1020 ++ + S N + ++ ++S FH+V + + + + NTDGI +S +TI S I TGDD V++ G T N+ I + G GHG+SIGS + GV NVTV + TGT NG+RIKS ++++G + + + +M NV PI+ID Y E + P WSDI Sbjct: 180 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSIGS-----ETMGVYNVTVDDLIMTGTTNGLRIKS-DKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVP--------DWSDI 354
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLRX_COCCA (Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 6.466e-18 Identity = 72/258 (27.91%), Postives = 111/258 (43.02%), Query Frame = 1 Query: 274 NDITIRIDGTL--VAPADYHVIGNA----ENWILFEHVSGVSIN---GGVLEGQGAGLWACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKV----SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAG-VQNVTVTSVTFTGTQNGVRIKSW------------GRTSSGFARNILFQHALMNNVDNPIIIDQKYCPEN 969 N I + I GT+ DY + +N F + G IN GG L+G G + D + N I+ L S ++ ++ + V + + + + NTDG S + I +S I GDDCVS P +TN+ ++N+ C HGIS+GSLG+ E V+N+ V +++ + +G RIK W G SG RN+ + ++ NVD I I Q Y +N Sbjct: 104 NGIDLDIQGTIQFTNDTDYWQANSFKQVFQNATTFFQLGGKDINVYGGGTLDGNGQAWYDLYAKDIYILRP--ILFGLIGAKNAKISDLKFRYSPQWYTLVANSSQVVFSNIDIFGDSKSKNPAKNTDGWDTYRSDNIIIQNSNINNGDDCVSFKPNSTNILVQNLVCNGSHGISVGSLGQYPGEVDIVENILVRNISMSNASDGARIKVWPGASSALSGDLQGGGGSGAVRNVTYDGMIVKNVDYAIEITQCYGQKN 359 The following BLAST results are available for this feature:
BLAST of DY263273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263273 ID=DY263273; Name=DY263273; organism=Citrus clementina; type=EST; length=1338bpback to top |