DY263278

Overview
NameDY263278
Unique NameDY263278
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1309
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.874e-38
Identity = 86/201 (42.79%), Postives = 115/201 (57.21%), Query Frame = 2
Query:  488 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWK 1090
            YMDA YYGEI IGTPPQ F V+FDTGSSNLWV S  C  S AC  H              G++ S+QYGTG++ GFF YD+++V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +S G A      M+ +G +  P+F  +L  +QQ   GG+ VFGGVD N               TG L W  +P+ +  +W+
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDEN-------------LYTGELTW--IPVTQELYWQ 254          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.874e-38
Identity = 84/190 (44.21%), Postives = 117/190 (61.58%), Query Frame = 2
Query:  476 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGH 1045
            +++NY+DA+Y+G I IGTPPQ FTVIFDTGSSNLWVPST C  S+AC  H               E+ SI YGTG++ G   YD+VKVG +   +Q F  +  EP +TF+ A FDGILGL +  IS  +A PV+ NM  +GL+   +FS +L  +  +++G   +FGG+D ++   S   +W P    G+
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYCS-SLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSQDLFSVYL--SSDDEKGSLVMFGGIDSSYYTGS--LNWVPVSYEGY 250          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 9.300e-38
Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 2
Query:  485 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWKFGL 1099
            +Y+DA Y+GEI IGTP Q F V+FDTGSSNLWVPS  C  S AC  H               ++ S++YG+G++ GFF YD+  + ++ V +QEF  +  EPG  F+ A+FDGI+GL +  +SVG+A P    MV+ G I   VFSF+L+ +QQ  +GG  V GGVD +               TG + W   P+ R  +W+ G+
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAYPSLSVGDATPALQGMVQDGTISSSVFSFYLS-SQQGTDGGALVLGGVDSS-------------LYTGDIYW--APVTRELYWQIGI 254          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.586e-37
Identity = 85/201 (42.29%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  488 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWK 1090
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWV S  C  S AC  H              G++ S+QYGTG++ GFF YD++ V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +S G A      M+ +G +  P+F  +L  +QQ   GG+ VFGGVD N               TG + W  VP+ +  +W+
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDKN-------------LYTGEITW--VPVTQELYWQ 254          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.586e-37
Identity = 95/222 (42.79%), Postives = 123/222 (55.41%), Query Frame = 2
Query:  437 PNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENV-FGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWKFGL 1099
            P    DS  T+   L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S AC  H               ES SI YGTG++ GF  YD+VKVG++   +Q F  +  EPG     A FDGILGL +  IS  +A PV+ NM  +GL+ + +FS +L+    +DE G  V FGG+D ++              TG L W  VP+    +W+  L
Sbjct:   55 PKAAFDSVPTE--TLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGFLGYDTVKVGNIEDTNQIFGLSESEPGSFLYYAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSEDLFSVYLS---SDDESGSVVMFGGIDSSY-------------YTGSLNW--VPVSYEGYWQITL 255          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.072e-37
Identity = 80/208 (38.46%), Postives = 120/208 (57.69%), Query Frame = 2
Query:  479 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWKFGLK 1102
            + NY+D+ Y+GEI IGTPPQ F V+FDTGSSNLWVPST C  S AC  H              G++ ++ YG+G++     YD+V V ++VV +QEF  +  EP   F  + FDGILG+ +  ++VGN+  V   M++QG + +P+FSF+ +R      GGE + GGVD             P+  +G + W   P+ +  +W+ G++
Sbjct:   67 ITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVGNSPTVMQGMLQQGQLSEPIFSFYFSRQPTHQYGGELILGGVD-------------PQLYSGQITW--TPVTQEVYWQIGIE 258          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.706e-37
Identity = 85/180 (47.22%), Postives = 107/180 (59.44%), Query Frame = 2
Query:  464 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY-FSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE--GGENVFGGVDPNH 994
            T  V L NY+D QYYGEIGIGTPPQ F VIFDTGS+NLWVPST C     AC  H             NG   +I YG+G + GF S D V VG + V  Q F E T  P   FM+AKFDG+LG+GF   +VG   PV+ +++ Q ++ + VFS + +R+ +     GGE V GG DP +
Sbjct:   67 TSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQDLVTVGGITV-TQTFGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILAQRVLTEDVFSVYYSRDSKNSHLLGGEIVLGGSDPQY 245          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.616e-37
Identity = 93/264 (35.23%), Postives = 143/264 (54.17%), Query Frame = 2
Query:  326 VRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYG---FPNNLRDSEDTDIV-ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWKFGLKG 1105
            +++ LKK+K   + R   R +   G+ L+    ++    F N L  + D  ++    +YMDA Y+G+I +GTPPQ F V+FDTGSSNLWVPS  C  S+AC  H               +S S++YGTG++ G F YD++ + D+ V  QEF  +  EPG  F+ A+FDGILGLG+  +S G A      ++++G +   +FS +L   Q  DE G+ + GGVD +               TG + W   P+ +  +W+ G++G
Sbjct:   19 IKVPLKKIK---SIREVLREKGLLGDFLKNHKPQHARKFFRNRLAKTGDFSVLYEPMSYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYCS-SLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGATTAMQGLLREGALSQSLFSVYLGSQQGSDE-GQLILGGVDES-------------LYTGDIYW--TPVTQELYWQIGIEG 262          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.873e-37
Identity = 88/205 (42.93%), Postives = 117/205 (57.07%), Query Frame = 2
Query:  479 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENV-FGGVDPNHTKASHLCSWEPRKATGHLKWGEVPIGR*THWK 1090
            L+NYMD +Y+G IGIGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H               +  S+ YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  I+   A PV+ N+  QGL+   +FS +L+ N   D+GG  V FGG+D ++              TG+L W  VP+   T+W+
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCS-SPACSNHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFSVYLSSN---DQGGSVVMFGGIDSSY-------------FTGNLNW--VPLSSETYWQ 251          
BLAST of DY263278 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.754e-36
Identity = 83/190 (43.68%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  476 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGENVFGGVDPNHTKASHLCSWEPRKATGH 1045
            +LKNYMD +Y+G IGIGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H                  SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL + +IS   A PV+ NM  +GL+   +FS +L+ + Q   G   +FGG+D ++   +   +W P    G+
Sbjct:   65 SLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCS-SPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYAPFDGILGLAYPQISASGATPVFDNMWNEGLVSQDLFSVYLSSDDQ--SGSVVMFGGIDSSYYSGN--LNWVPVSVEGY 249          
The following BLAST results are available for this feature:
BLAST of DY263278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PEPC_MOUSE1.874e-3842.79Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPA2_RABIT1.874e-3844.21Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_RABIT9.300e-3841.46Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPC_RAT1.586e-3742.29Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPA3_RABIT1.586e-3742.79Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_MONDO2.072e-3738.46Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
RENI_SHEEP2.706e-3747.22Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPC_CAVPO4.616e-3735.23Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPA_RHIFE7.873e-3742.93Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA_CANFA1.754e-3643.68Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11BC07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263278 ID=DY263278; Name=DY263278; organism=Citrus clementina; type=EST; length=1309bp
CCGCTATATTTAGAGTCCCAACAACGAGCAATCCGTGAGTCCTAAATCGA
CGGTTAAAGGTCAGCACTTTGGTAAAAATCTAACGGTTTAGATTTAAATA
AAAATAGAACCAAAACAGCTGAGCTAGGCCCCGGTGGCTGACGGGTAGCT
TTTATAGTCGAGTCTCTCGCGCTCTCGATATTCATTCTTTCGTTTGCGTT
ACGAGTCGACTTTGATCTTTCAAGTTTCGGCGATCATGGGAACCAAAATC
AGAGCAGTACCGTTGTCTTTGTTCCTCTCAAGCCTTTTGTTTTCTCTGGT
GGCTTCTGTGTCCAATGATGGATTGGTTAGAATAGGGCTGAAAAAGATGA
AATTGGATCCCAACAACCGGCTTGCTGCCCGGCTGGAGTCCGAGCATGGC
GAGGCATTGAGAGCTTCTGTTAAGAAATACGGATTTCCTAATAATCTCCG
AGACTCTGAGGATACTGATATTGTTGCATTGAAAAACTATATGGATGCTC
AGTACTACGGTGAGATTGGTATTGGTACTCCTCCACAGAAGTTCACTGTA
ATCTTTGACACAGGTAGCTCTAATTTGTGGGTGCCTTCAACTAACTGTTA
TTTCTCGGTTGCTTGTTACTTTCATTCCAAGTACAAGTCAAGCCAATCCA
GTACATACAAGAAGAATGGTGAATCTGCTTCTATTCAGTATGGTACTGGA
GCTATTGCTGGTTTCTTTAGTTATGACAGTGTCAAAGTTGGTGACCTGGT
TGTCAAAGATCAGGAATTTATTGAGGCAACCAGGGAGCCTGGTGTCACAT
TTATGGTGGCCAAGTTTGATGGCATATTAGGACTTGGGTTTCAAGAGATT
TCAGTTGGAAATGCTGTCCCAGTTTGGTACAACATGGTCAAACAAGGCCT
AATTCAGGATCCAGTTTTTTCATTTTGGCTTAACCGCAATCAACAGGAAG
ATGAAGGTGGTGAAAATGTCTTCGGTGGGGTTGATCCAAATCATACAAAG
GCAAGCCACTTATGTTCCTGGGAACCCAGAAAGGCTACTGGGCATTTAAA
ATGGGGGGAAGTTCCTATTGGCCGGTAAACCCACTGGAAATTTGGGCTGA
AGGGTGGTTCACAATTTGAAATTCTGGGTACTTTTTTTGTGGGGAGGCCA
ACGAAGGGGGAATTCCATTGAAAAATACAGGCCTATGTGGAACCCCTCGG
GAAGTTTTTACCCCCAAAAGGGGCAGAGGAGAGTTGTTTGAAGAAAATAG
GAAACAAAAAACATTTTGTGGAGATTTTTTCTTTTTGTTTTTTGGAGGGA
CACCACCCT
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