DY263284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_SHEON (Undecaprenyl pyrophosphate synthetase OS=Shewanella oneidensis GN=uppS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.310e-16 Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + EV LM+LF ++ E++ +++++IGD SR LQ+ +R AE++T NS L VA +Y G++D++QA + +A+KV+ + E + + L Sbjct: 94 WRRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHL 200 HSP 2 Score: 36.965 bits (84), Expect = 5.310e-16 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 872 ELLIRTSGELRSSNFLLWQLAYTR-VFLRT 958 +L+IRT G+ R SNF+LWQ AY VFL T Sbjct: 209 DLIIRTGGDYRISNFVLWQAAYAELVFLDT 238
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_PYRFU (Undecaprenyl pyrophosphate synthetase OS=Pyrococcus furiosus GN=uppS PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 5.317e-16 Identity = 34/103 (33.01%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 540 EVEFLMKLFEKSIKSEL-EGFISE-GIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 EV+ LMKLFE+ + + + + E GIR++++G LP+ ++E +AE T+ +N+ L +A++Y G+ ++V A K I V + ++L+DI+E ++ + L Sbjct: 98 EVDRLMKLFEEKFRELVTDRRVHEYGIRVNVMGRKELLPKNVREAAEEAERVTRKYNNYFLNIALAYGGRSEIVDAIKDIVNDVLEGRLKLEDINEEIVRKYL 200 HSP 2 Score: 41.9726 bits (97), Expect = 5.317e-16 Identity = 17/29 (58.62%), Postives = 25/29 (86.21%), Query Frame = 2 Query: 863 PFPELLIRTSGELRSSNFLLWQLAYTRVF 949 P P+++IRT GE+R SNFLL+Q+AY+ +F Sbjct: 206 PDPDIVIRTGGEVRISNFLLYQIAYSELF 234
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_RHOBA (Undecaprenyl pyrophosphate synthetase OS=Rhodopirellula baltica GN=uppS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.931e-16 Identity = 35/127 (27.56%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 477 LPLVRMLIIFLINFYWLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPAVL 857 L L + + L + W + Q E++FLM L ++ + E + +R+ IG RL + + + + ++NN+ +L++AV Y G+ ++ + + +AQ+V+D +D+I ESL+++ L+ A L Sbjct: 54 LKLDALTLYCLSSENWKRPQAELDFLMHLLQQYLVEERRTIRDQNMRLRFIGRRDRLSDEVLKEIAKTQAVSENNTGTELVLAVDYGGRDELTRMTRQLAQQVRDGERSIDEITESLVDESLDTAGL 180 HSP 2 Score: 38.5058 bits (88), Expect = 6.931e-16 Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 863 PFPELLIRTSGELRSSNFLLWQLAYTRVF 949 P +L+IRT G++R SN+LLWQ++Y ++ Sbjct: 181 PDVDLMIRTGGDIRISNYLLWQISYAELY 209
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_ENTFA (Undecaprenyl pyrophosphate synthetase OS=Enterococcus faecalis GN=uppS PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 8.976e-16 Identity = 34/118 (28.81%), Postives = 60/118 (50.85%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPAVLITHSRN 875 W + EV FLM+L + + I E ++++++G LP Q+ V+ A ++TK+N+ L A++Y + +++ A K IA +V + D+I E I L L T R+ Sbjct: 84 WKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGMVLNFALNYGARAELLTAMKQIAAEVSEKAYTADEITEETIADHLMTGFLPTELRD 201 HSP 2 Score: 47.3654 bits (111), Expect = 8.976e-16 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 2 Query: 854 TDYPFPELLIRTSGELRSSNFLLWQLAYTRVF 949 T+ PELLIRTSGE R SNFLLWQ+AY+ +F Sbjct: 197 TELRDPELLIRTSGEERISNFLLWQIAYSELF 228
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_THEVO (Undecaprenyl pyrophosphate synthetase OS=Thermoplasma volcanium GN=uppS PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 8.990e-16 Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 540 EVEFLMKLFEKSIKSEL--EGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDES 824 EV+FL L + S L E I + +IG+ S LP L+E ++ E+ TKN SN+ + +A+ Y G+ +++ A K IA+ I +D+IDES Sbjct: 92 EVDFLFHLINDAFISLLKDERVYKNKINVKVIGNVSMLPEYLRETIKITEETTKNFSNYHMNLAIGYGGREEILDAIKRIARDAIAGKINVDEIDES 188 HSP 2 Score: 43.5134 bits (101), Expect = 8.990e-16 Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 863 PFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 P P+L++RTSGE R SNFLLWQ AY+ ++ +D + K + R++ +Q+R+ Sbjct: 200 PDPDLILRTSGEERISNFLLWQSAYSELYF-SDVYWPEFSKLDFLRAI-YSYQRRQ 253
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_BUCAI (Undecaprenyl pyrophosphate synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=uppS PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.997e-16 Identity = 32/113 (28.32%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPAVLI 860 W + E++ LM+LF ++ +E++ IR +IGD + + LQ + AE T +N+ L +A +Y G++D++++ K I +V+ ++ ++ I E+ I Q L + L+ Sbjct: 75 WNRPLFEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGLILNIAANYGGRWDIIESVKKIINRVQRGILDVNKIHENTISQYLSTSELL 187 HSP 2 Score: 41.2022 bits (95), Expect = 8.997e-16 Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2 Query: 872 ELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLD 976 +L+IRT GE R SNFLLWQ+AY+ ++ TD L D Sbjct: 190 DLVIRTGGEKRISNFLLWQIAYSELYF-TDVLWPD 223
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_NEIG1 (Undecaprenyl pyrophosphate synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=uppS PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.001e-16 Identity = 32/116 (27.59%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 462 LRNLILPLVRMLIIFLINFY-----WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQAC-KSIAQKVKD 791 L N++ ++ + +L F W + + EV FLM LF ++++ ++ +R+ ++G R R + + + +AE T NN+ L +A Y G++D++QA K IA+ V + Sbjct: 47 LENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGVSE 162 HSP 2 Score: 47.7506 bits (112), Expect = 9.001e-16 Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 857 DYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 D P P+L IRT GE R SNFLLWQ+AY ++ TD L D + + ++ FQ+R+ Sbjct: 176 DAPEPDLFIRTGGETRISNFLLWQMAYAELYF-TDILWPDFDETALDAAV-ASFQKRE 231
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_NEIMB (Undecaprenyl pyrophosphate synthetase OS=Neisseria meningitidis serogroup B GN=uppS PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.170e-15 Identity = 32/116 (27.59%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 462 LRNLILPLVRMLIIFLINFY-----WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQAC-KSIAQKVKD 791 L N++ ++ + +L F W + + EV FLM LF ++++ ++ +R+ ++G R R + + + +AE T NN+ L +A Y G++D++QA K IA+ V + Sbjct: 47 LENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGVSE 162 HSP 2 Score: 47.3654 bits (111), Expect = 1.170e-15 Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 2 Query: 857 DYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDL-GKA 988 D P P+L IRT GE R SNFLLWQ+AY ++ TD L D GKA Sbjct: 176 DAPEPDLFIRTGGETRISNFLLWQMAYAELYF-TDILWPDFDGKA 219
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_NEIMA (Undecaprenyl pyrophosphate synthetase OS=Neisseria meningitidis serogroup A GN=uppS PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.520e-15 Identity = 32/116 (27.59%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 462 LRNLILPLVRMLIIFLINFY-----WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQAC-KSIAQKVKD 791 L N++ ++ + +L F W + + EV FLM LF ++++ ++ +R+ ++G R R + + + +AE T NN+ L +A Y G++D++QA K IA+ V + Sbjct: 47 LENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILKGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGVSE 162 HSP 2 Score: 47.3654 bits (111), Expect = 1.520e-15 Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 2 Query: 857 DYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDL-GKA 988 D P P+L IRT GE R SNFLLWQ+AY ++ TD L D GKA Sbjct: 176 DAPEPDLFIRTGGETRISNFLLWQMAYAELYF-TDILWPDFDGKA 219
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_RICFE (Undecaprenyl pyrophosphate synthetase OS=Rickettsia felis GN=uppS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.524e-15 Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 468 NLILPLVRMLIIFLINFYWLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPAVLI 860 NL +P + + N W + EV+FL+KL K+EL G++I +IG + L +LQ+ + +A + TKNN+ L +A SY + ++V AC I K ++ DI +L + E+ L+ Sbjct: 54 NLNIPYITLYTFSSEN--WQRSSTEVDFLIKLLSIYFKNELNSLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTKNNNKITLCIAFSYGSRQEIVDACTKIIASGKKEISE-SDIGHALYDPEMPDVDLL 181 HSP 2 Score: 35.8094 bits (81), Expect = 1.524e-15 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 857 DYPFPELLIRTSGELRSSNFLLWQLAYTRVF 949 + P +LLIR G R SNFLLWQ AY ++ Sbjct: 174 EMPDVDLLIRPGGVYRISNFLLWQAAYAELY 204 The following BLAST results are available for this feature:
BLAST of DY263284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263284 ID=DY263284; Name=DY263284; organism=Citrus clementina; type=EST; length=1116bpback to top |