DY263334

Overview
NameDY263334
Unique NameDY263334
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1301
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS2_MOUSE (Dual specificity protein phosphatase 2 OS=Mus musculus GN=Dusp2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.276e-14
Identity = 50/140 (35.71%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  269 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--EDDKILQ----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKI 670
            P EILP +LYLGS +++S    L+  GI+ VLN   SC N ++  F Y  +  ED+++++    F +AI F++  +     VLVHC  G +RSA I +AYL++    RL ++  +VK+RR  ++       QL + E ++
Sbjct:  177 PVEILP-YLYLGSCNHSSDLQGLQACGITAVLNVSASCPNHFEGLFHYKSIPVEDNQMVEISAWFQEAISFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSHRVRLDEAFDFVKQRRGVISPNFSFMGQLLQLETQV 315          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS7_RAT (Dual specificity protein phosphatase 7 (Fragment) OS=Rattus norvegicus GN=Dusp7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.582e-13
Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  263 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNS--FTYHCLE-----DDKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAGMPSFSFGFP 751
            AFP +ILP +LYLG   +++   +L   GI  +LN  P+  N +++   FTY  +         + QF  +AI F+++    K  VLVHC+ G +RS  + +AYLM+     L  ++ +VK ++ +++   +   QL ++E+ +  S    N TP   L    P+    FP
Sbjct:  104 AFPVQILP-YLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLSSPCDNHTPSEQLYFSTPTNHNLFP 273          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: SSH3_RAT (Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus GN=Ssh3 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.699e-13
Identity = 62/173 (35.84%), Postives = 80/173 (46.24%), Query Frame = 2
Query:  272 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE--DDKILQ----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEY-------------EQKIFGSVDGSNP------TPLPAL 715
            S I P  LYLGS  NA+    L+   +S +LN      N +   FTYH +   D++  Q    + +  +F+E        VLVHC  G +RSAA V+AY MK  GW L Q+   V+E RP V       +QLQ Y             EQK+ G V    P      TPLP L
Sbjct:  327 SRIFPH-LYLGSEWNAANLEELQRNRVSHILNMAREIDNFFPERFTYHNVRVWDEESAQLLPHWKETHRFIEDARAQGTRVLVHCKMGVSRSAATVLAYAMKQYGWGLEQALIHVQELRPIVRPNPGFLRQLQTYQGILTASRQSHVWEQKV-GVVSPEEPLAPEVSTPLPPL 497          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS6_MOUSE (Dual specificity protein phosphatase 6 OS=Mus musculus GN=Dusp6 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.525e-13
Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 2
Query:  263 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNS--FTYHCLE-----DDKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAGMPS 733
            +FP EILP FLYLG   +++   +L+  GI  +LN  P+  NL++N+  F Y  +         + QF  +AI F+++       VLVHC+ G +RS  + +AYLM+     +  ++  VK ++ +++   +   QL ++E+ +  S    N  P P L    PS
Sbjct:  205 SFPVEILP-FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLSSPCDNRVPTPQLYFTTPS 368          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS5_RAT (Dual specificity protein phosphatase 5 OS=Rattus norvegicus GN=Dusp5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.525e-13
Identity = 57/158 (36.08%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  269 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAG 724
            P EILP FLYLGS  +AS+   L    I+ +LN              Y  +  ED    D    F +AI F++    +   VLVHC  G +RS  I +AYLMK K +RL ++ +++K+RR  V+       QL +YE +I      S PTP P    G
Sbjct:  179 PVEILP-FLYLGSAYHASKCEFLANLHITALLNVSRRTSEACTTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVREEGGKVLVHCEAGVSRSPTICMAYLMKTKQFRLKEAFEYIKQRRSVVSPNFGFMGQLLQYESEIL----PSTPTPQPPSCQG 331          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS7_MOUSE (Dual specificity protein phosphatase 7 OS=Mus musculus GN=Dusp7 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 6.013e-13
Identity = 51/171 (29.82%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  263 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNS--FTYHCLE-----DDKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAGMPSFSFGFP 751
            AFP +ILP +LYLG   +++   +L   GI  +LN  P+  N +++   FTY  +         + QF  +AI F+++    K  VLVHC+ G +RS  + +AYLM+     L  ++ +VK ++ +++   +   QL ++E+ +  S    N  P   L    P+    FP
Sbjct:  192 AFPVQILP-YLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLSSPCDNHAPSEQLYFSTPTNHNLFP 361          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS5_HUMAN (Dual specificity protein phosphatase 5 OS=Homo sapiens GN=DUSP5 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.026e-12
Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 2
Query:  269 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKAC-VLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAG 724
            P EILP FLYLGS  +AS+   L    I+ +LN              Y  +  ED    D    F +AI F++ C R+K   VLVHC  G +RS  I +AYLMK K +RL ++  ++K+RR  V+       QL +YE +I  S     P      +AG
Sbjct:  179 PVEILP-FLYLGSAYHASKCEFLANLHITALLNVSRRTSEACATHLHYKWIPVEDSHTADISSHFQEAIDFID-CVREKGGKVLVHCEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPSTPNPQPPSCQGEAAG 335          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS19_HUMAN (Dual specificity protein phosphatase 19 OS=Homo sapiens GN=DUSP19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.285e-12
Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 2
Query:  176 HKYEEGEVC--GICGHRSASSAEKTTTLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL------EDDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQ 664
            H  EE E    G CG+    S++    LQV      ++  +L LGS D A     LK   ++ +LN     +N + + FTY  +      E + +  F +  +F+E+ +R    VLVHC  G +R+AAIVI +LM  +      +   VK  RPS+       +QL+ Y++
Sbjct:   41 HVVEEVEPSSGGGCGYVQDLSSD----LQVG-----VIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQE 202          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: SSH3_MOUSE (Protein phosphatase Slingshot homolog 3 OS=Mus musculus GN=Ssh3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12
Identity = 60/173 (34.68%), Postives = 80/173 (46.24%), Query Frame = 2
Query:  272 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE--DDKILQ----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEY-------------EQKIFGSVDGSNP------TPLPAL 715
            S I P  LYLGS  NA+    L+   +S +LN      N +   FTY+ +   D++  Q    + +  +F+E        VLVHC  G +RSAA V+AY MK  GW L Q+   V+E RP V       +QL+ Y             EQK+ G V    P      TPLP L
Sbjct:  327 SRIFPH-LYLGSEWNAANLEELQKNRVSHILNMAREIDNFFPERFTYYNVRVWDEESAQLLPHWKETHRFIEDARAQGTRVLVHCKMGVSRSAATVLAYAMKQYGWDLEQALIHVQELRPIVRPNHGFLRQLRTYQGILTASRQSHVWEQKV-GVVSPEEPLAPEVSTPLPPL 497          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS6_RAT (Dual specificity protein phosphatase 6 OS=Rattus norvegicus GN=Dusp6 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12
Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 2
Query:  263 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNS--FTYHCLE-----DDKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAGMPS 733
            +FP EILP FLYLG   +++   +L+  GI  +LN  P+  NL++N+  F Y  +         + QF  +AI F+++       VLVHC+ G +RS  + +AYLM+     +  ++  VK ++ +++   +   QL ++E+ +  S    N  P   L    PS
Sbjct:  205 SFPVEILP-FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLSSPCDNRVPAQQLYFTAPS 368          
The following BLAST results are available for this feature:
BLAST of DY263334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
DUS2_MOUSE9.276e-1435.71Dual specificity protein phosphatase 2 OS=Mus musc... [more]
DUS7_RAT1.582e-1330.41Dual specificity protein phosphatase 7 (Fragment) ... [more]
SSH3_RAT2.699e-1335.84Protein phosphatase Slingshot homolog 3 OS=Rattus ... [more]
DUS6_MOUSE3.525e-1330.91Dual specificity protein phosphatase 6 OS=Mus musc... [more]
DUS5_RAT3.525e-1336.08Dual specificity protein phosphatase 5 OS=Rattus n... [more]
DUS7_MOUSE6.013e-1329.82Dual specificity protein phosphatase 7 OS=Mus musc... [more]
DUS5_HUMAN1.026e-1236.48Dual specificity protein phosphatase 5 OS=Homo sap... [more]
DUS19_HUMAN2.285e-1230.41Dual specificity protein phosphatase 19 OS=Homo sa... [more]
SSH3_MOUSE2.984e-1234.68Protein phosphatase Slingshot homolog 3 OS=Mus mus... [more]
DUS6_RAT2.984e-1230.30Dual specificity protein phosphatase 6 OS=Rattus n... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA11BH06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263334 ID=DY263334; Name=DY263334; organism=Citrus clementina; type=EST; length=1301bp
TCTCATCAAACATCAATCAACTTTCTTTTTATCAAACATTTTCGGTTCTA
ATTTACCGTATTAATAATAAGGAAATTATAGTAATTAAAATTTAGAGAAA
TAAATAATAAAGATTTGGTTGTTTGTTATGAGGAAGAGGGAGAGAGAGAA
CCCCTGCTCTGTGTGCGGGCACTACCACAAGTACGAGGAAGGAGAAGTTT
GCGGGATTTGCGGCCACCGCTCTGCGTCGTCGGCAGAGAAGACGACGACG
CTCCAAGTCAGCGCGTTTCCGTCTGAGATCCTGCCCGATTTCCTCTATTT
GGGCAGCTACGACAACGCGTCTCGCTCAGGGCTTCTGAAGACTCAAGGGA
TCTCGCGTGTTCTTAATACGGTACCTTCTTGTCAAAATCTCTACAAGAAC
TCATTTACCTATCACTGCCTTGAAGATGACAAAATTTTACAATTCGATGA
TGCAATTCAGTTTTTAGAACAATGTGAGAGGGACAAAGCTTGTGTTCTCG
TGCACTGCATGTTTGGAAAAAACAGGTCGGCTGCTATTGTAATAGCATAC
TTGATGAAGTGTAAAGGATGGAGACTTGCACAGAGTCATCAGTGGGTGAA
AGAGCGGAGACCATCTGTTAACTTAACAGAAGATGTCCACCAACAGTTGC
AGGAGTATGAACAGAAGATCTTTGGGTCAGTTGATGGTAGCAATCCTACT
CCCTTGCCTGCTCTGTCTGCAGGCATGCCATCCTTTAGCTTCGGCTTCCC
AAAGGGTAATAATGATCCTGTTCCTGTACCTGTCCCTGCCCCTGCCCCTG
CCCCTGCTTTCAACACTAATTTTGGAGCAACCTCCATTTTTGCCGGTCGT
CCTTCAAATGTTCCTACACAGGGGTTCACATTTGGAGCTGGGCAGACTGA
CATCTCTCAAACCTCTCTCAGTGGCAACATTCTAAACCAAATGGGCAGTG
ATATTCCATGGACAGCTCCTTAATTCTTGTTAGCATTGGGGAAATCGGCC
AAAACAAGAAGTGGTGTGAATCCCATCCCGGGCCCTCCAAATGAAATTTG
GTTGGAAAGGGGGAGTAAAAACCCCAACTCCTTGCTTTTGGGGAACCCAC
CTGGGGGAACCAAGGTGAAGGCCCCTTTCCCCCCCCCAGGTTCTTGGAAA
GGCCCCTTTACCGGGGCCCATTGTCAAAATTTTTTATAAAAGGGTTCCCT
GTTTTTCCCGGGGAAAAAATCCCCTTTTGTGGTGTTTAACCTAAAAGTAA
ACCTTTTTTTCCTCCCGGAAAAAAACACCACCCTCCCCCCCCTCGGGGGG
A
back to top