DY263355

Overview
NameDY263355
Unique NameDY263355
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1241
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263355 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.275e-30
Identity = 77/216 (35.65%), Postives = 119/216 (55.09%), Query Frame = 1 
Query:  415 AQYLVPAMRNIQNAINGANLGSQIKVSTAIEFGALEVSSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFA-IDGDRQISLDYALFR----SQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESGWPTAG-GDGALTNVDNARTYNNNLIQHV--KQGSPKKPGRPIETYIFAMFDEKD*QGAEIEKHWGLFAPNKQPKY 1038
            A  L+PA+ ++ NA+  +NL +QIKVST      +  + PPS   F Q +  I+ P++ FL++  SPL++NLYPY+  +     + LD  LF     S++ V  +  L Y N+ DA +DA Y +++      + ++++ESGWP+ G        +DNA TYN+NLI+HV  + G+P  P      YI+ +F+E        E  WGLF  N  P Y
Sbjct:   37 APLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVY 252
The following BLAST results are available for this feature:
BLAST of DY263355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E131_ARATH2.275e-3035.65Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11CB05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263355 ID=DY263355; Name=DY263355; organism=Citrus clementina; type=EST; length=1241bp
TTTTTCTCCCTGGCTAAATTCTTATCCTCCCTCAATACCCCTCCAATGGT
TTCCGTCGTCTTGCTACTTCTTGGCCTGCTAGTGGCTACTCTAGACACTA
CAAGTGCTCAAATAGGTGTTTGTTATGGAATGCTTGGTGACAACTTACCA
TCAAAACCAGATGTCATAGCTCTCTACAACCAAAACAACATCAGAAGAAT
GAGACTCTATGATCCAAACAAAGAAGTTCTAGAAGCTCTCCGTGGCTCCA
ACATTGAAGTTTTGCTAGGCCTTCCCAACGATAAGCTCCAGATAATCGCT
TCCAATCAAGCCGAAGCGAACACTTGGGTCCAAGACAACATCCAAAATTT
TGTTAACAATGTCAAGTTCAAATACATCGCTGTAGGAAATGAAGCAAAAC
CAGGAGACAACTTCGCTCAGTATCTTGTTCCCGCCATGAGAAACATACAA
AATGCCATTAACGGAGCTAACCTTGGAAGCCAAATCAAAGTTTCCACTGC
CATTGAATTCGGAGCTCTTGAAGTATCCTCTCCGCCGTCAGCAGGCTCCT
TTAAGCAAGCTTACAGACCAATTCTTGATCCCGTCATTACCTTCCTCAAC
GAAAACAAATCCCCGTTGCTTGTTAACTTGTACCCTTACTTCGCAATTGA
TGGCGACCGTCAAATATCTCTTGATTATGCACTGTTTCGGTCCCAACAAC
CGGTTGTTTCGGACCCTCCGTTGAGTTACCGGAATCTTTTTGATGCCCAG
TTGGATGCTACTTATGCTGCGTTGGAGAAAGCCGGTGGGGGCTCGTTGGA
TATTGTGATATCGGAGAGTGGGTGGCCAACGGCGGGTGGTGACGGAGCGT
TAACGAATGTTGATAATGCAAGGACTTATAATAATAACTTGATACAGCAT
GTGAAGCAAGGGTCACCAAAGAAACCTGGCAGGCCTATTGAGACTTACAT
TTTTGCTATGTTTGATGAGAAAGATTAACAGGGAGCTGAAATTGAAAAGC
ATTGGGGACTTTTTGCTCCAAACAAACAGCCTAAATACAAAGTTATTTTT
AATTAATTAACCAAATCCAAACAACCGCCAAATTTAAAAAATTATTTGGG
AAGGAAATAATTTAGGGCACCAATTTTTACCTTTTTATTAAAATAAAAAT
TTGGTTTACCCCCCTTTCCCCCGGTGCATGGAGGCCAAAATTTTCCTTTA
TCAAAAAAAATTCCTGGAGATTTGGGGGATTTTTAAATTTT
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