DY270852

Overview
NameDY270852
Unique NameDY270852
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1090
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 3.652e-98
Identity = 163/237 (68.78%), Postives = 199/237 (83.97%), Query Frame = 3
Query:  138 PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPS-NNPLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATNPFVDKFGKIQT 845
            P S   ++KKWGTH+MGAPA P AHPDNQ+AA+W A + QQ  +Q YV YSP++ P+ NNPLEPVI  F+TWS KAET+ARN+WHNLKTGPS+SE AWGKVNLTAKAIT+GGFESLF+QIF T+PNE LKKTFACYLSTTTGPVAGT+YLS ARVAFCSDRPL FTAPSGQE+WSYY+V++PLAN+++VNPV +KE   +KY+++ T +GH+FWFMG VN++KAT+  +      QT
Sbjct:   29 PSSSSPDQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQT 265          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.268e-42
Identity = 94/245 (38.37%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  120 STLTEAPPSEEEERKK---WGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATNPFVD 824
            ST  +AP       KK   W   ++      S  PD QKAAS ++        +S  E S  D    + +E V      W       + K E++A N W +L+T PS ++AA G++  + K   EGG+E +F+Q F TDP E+L  +FACYLST+ GPV G LY+S+A++A+CSD PL +     Q  WSYYKV+IPL  + +VNP     N ++KY+++++ + HEFWFMG +N+  A     D
Sbjct:   53 STPVKAPSRTSSGSKKSVHWSPELVSG----SQEPD-QKAASSSSAGSNPYIARSPAETS--DASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSY-KNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQD 289          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 5.359e-41
Identity = 89/212 (41.98%), Postives = 124/212 (58.49%), Query Frame = 3
Query:  192 PAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKA 806
            P  P   P    A +  AE+        YV  SP  +   N ++ V      W       + KAE +A N W +LKTGPSV++AA  ++    K + EGG+E +FKQ F   P+EKL KT+ACYLST+ GPV G +YLST ++AF SD PL +     Q  WSYYKV++P   + +VNP T + N SDKY+++++ + HEFWFMG V ++ A
Sbjct:   45 PPPPQPIPTGAAATTMPAESNP------YVSPSPAPR---NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSY-KEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESA 246          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.238e-29
Identity = 61/152 (40.13%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  357 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATN 812
            K ++    +    K GP ++E    K++L A+ +  GG E ++K++F     EKL K + CYLSTT GP+AG L++S+ ++AFCS+R +   +P G+    +YKV IPL  I+ VN        S KYL++VT +G +FWFMG +++QKA N
Sbjct:   56 KNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFN 207          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.112e-29
Identity = 78/233 (33.48%), Postives = 119/233 (51.07%), Query Frame = 3
Query:  150 EEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIW-HNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATNPFVD 824
            + E   W   ++      S  PD +  +S +A        ++  E S  D      +E V      W       + KAE++A N W H L+       AA G++  + K + EGG+E +F+Q F T P E+L+ +FACYLST+ GPV G LY+STA++A+CSD  L               V+IPL  + SVNP     N ++KY+++++ + HEFWFMG +N++ A     D
Sbjct:   24 DRENLHWNPELVSE----SPAPDEKALSSSSAARSNPYVARAPTETS--DASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQD 228          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.759e-29
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 3
Query:  396 KTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATN 812
            K GP ++E    K++L AK +  GG E ++K++F     EKL K + CYLSTT GP+AG L++S+ ++AFCS+R +   +P G  +  +YKV IPL  I+ VN     +  S KYL+IVT +  +FWFMG V++QKA N
Sbjct:   69 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFN 207          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.146e-29
Identity = 60/139 (43.17%), Postives = 90/139 (64.75%), Query Frame = 3
Query:  396 KTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATN 812
            K GP ++E    K++L AK +  GG E ++K++F     EKL K + CYLSTT G +AG L++S+ ++AFCS+R +  T+P G     +YKV IPL  I+ VN     +  S +YL++VT + ++FWFMG V++QKA N
Sbjct:   61 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFN 199          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.369e-28
Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  357 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATN 812
            K +     +    K  P ++E    K++L A+ +  GG E +FK++F     EKL K + CYLSTT GP+AG L++S+ ++AFCS+R +   +P G     +YKV IPL  I  VN     +  S KYL++VT +G +FWFMG +++QKA N
Sbjct:   55 KTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFN 206          
BLAST of DY270852 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.855e-26
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 3
Query:  357 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCF-TAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYLKIVTGEGHEFWFMGLVNFQKATN 812
            KAE +   +  +LK  PS+S+AA  +++   K I EGG E +F++ F     EKL  +F CY+STT+GPV G +Y+S  R+AFCSD  +   ++  G    +YYKV++    ISS++  T     S++Y+ +VT +G EFWFMG V++  A N
Sbjct:   66 KAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFN 218          
The following BLAST results are available for this feature:
BLAST of DY270852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GEML5_ARATH3.652e-9868.78GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
GEM_ARATH8.268e-4238.37GLABRA2 expression modulator OS=Arabidopsis thalia... [more]
GEML1_ARATH5.359e-4141.98GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1... [more]
GEML8_ARATH1.238e-2940.13Putative GEM-like protein 8 OS=Arabidopsis thalian... [more]
GEML3_ARATH2.112e-2933.48Putative GEM-like protein 3 OS=Arabidopsis thalian... [more]
GEML6_ARATH2.759e-2944.60GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g... [more]
GEML7_ARATH6.146e-2943.17GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g... [more]
GEML4_ARATH1.369e-2840.13GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g... [more]
GEML2_ARATH2.855e-2640.52GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP7YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270852 ID=DY270852; Name=DY270852; organism=Citrus clementina; type=EST; length=1090bp
AACAATAAATCCATCAGAATTTATTTATTTATTTATTTTTGTTCTCATAG
CAATAGCCTCAACCTTCCAGTCAATCGACAACCAGCATCACCATGACAAG
CACACCAGAAAAATTGTCAAGCACTCTGACAGAAGCTCCACCTTCAGAAG
AAGAAGAAAGAAAGAAATGGGGTACCCATATCATGGGAGCGCCAGCGGTG
CCTAGTGCTCACCCAGACAATCAAAAGGCAGCCTCATGGAACGCCGAAAA
CCGCCAGCAAATCTATCATCAGTCTTATGTCGAGTACTCTCCTATCGACA
AGCCAAGTAACAACCCTTTGGAGCCTGTAATTCACGCGTTCAATACTTGG
AGCACCAAAGCTGAGACCATTGCCCGCAACATCTGGCATAATCTGAAAAC
CGGTCCCTCTGTGTCGGAAGCTGCATGGGGGAAGGTGAATTTGACAGCGA
AAGCAATAACAGAGGGCGGATTTGAGTCTCTCTTCAAGCAGATTTTTGCA
ACTGATCCGAATGAGAAGCTAAAGAAGACCTTTGCGTGTTATCTTTCTAC
AACAACTGGTCCTGTTGCTGGAACACTCTATTTATCAACGGCCCGTGTGG
CTTTTTGCAGTGATCGTCCCTTGTGTTTTACTGCTCCATCTGGGCAGGAA
GCTTGGAGCTACTACAAGGTTATGATACCTTTGGCGAATATAAGCTCAGT
CAATCCAGTGACATTAAAAGAAAATGCATCAGACAAGTACCTGAAAATTG
TAACTGGGGAGGGACATGAATTTTGGTTCATGGGCCTTGTCAATTTCCAG
AAAGCAACGAACCCCTTTGTTGACAAGTTTGGCAAAATACAAACCAACTG
GGAATGCCGGGCGAGGGGGCCAAACAGTAACTGGGAAAAATGGTTGGTGG
GACCCCGCCAGTGACCCCAAAATTTTCCTAAGGCACCCGCTTTTGGGTGT
TTTCTCTTCATTTTGAAAAATTAAAAGGTGGGGTTTGGTGTGAAAACCCC
AAAATAAAAGGGGCATATTTTGGGGTGGAAAAGAACCAAAAACAAGGGTT
CCCCTCGCGGTGTTTCACCAACTCCAAGGGGGAGAAAAAA
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