DY270862

Overview
NameDY270862
Unique NameDY270862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1144
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY270862 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.124e-11
Identity = 70/233 (30.04%), Postives = 102/233 (43.78%), Query Frame = 1 
Query:    1 DNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 645
            D + LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   49 DQRDLILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272
The following BLAST results are available for this feature:
BLAST of DY270862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC2_CLALU2.124e-1130.04Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAP7YP17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270862 ID=DY270862; Name=DY270862; organism=Citrus clementina; type=EST; length=1144bp
GACAATAAGACCCTTATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTT
AAGCATCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGAC
GGGTTTTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACC
ACCATCACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGG
AGATGGCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAA
AGGGCGTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTT
CCTCCATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAATGA
TCCAGATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATC
CAGTTAATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAG
GTTCGAATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGCGGC
ATATTCGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACCTGT
CAGATATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACGGGG
GACTTTTTAGAAAGCCATGAGGTTATAAATTGGACCTTCAACTCGTTCCC
AGTGCCGCCTTCTCTCAAGGAGAAAAACCTGGTGATGCCAATATAATTCT
AAACCGTCCTTGAAAAACCCTGTCACATAAATTATAATCAATAATAATTA
ATATCACCAATAAAAGTGACATGGCCTCTGCCATAAAATATTGATTAAAA
TGATACCCCCCACTAAGAATTATACTGTTTGCCTTGCCGTCCGAAAGTAC
CGGATGTGCTTATGTAAAAATGCTCCAATTCAGCTTCCAATTGATTACCT
TGCCCCCTTTAACCTTCCGAATTTTTCCCAAAAAAAAAAAAAAAAAAAAA
CCCCCCCTTTTCTTTTACAAAGTTGGGCACTTTAAAAAAAAACTTGCCTT
TACCATATTTTTGTCCCCCGCAAAAGCTTCCTAACACCCTTACAAAACAA
AAATCCTTTTTTTTTCCCCTCCCCACCTCAAAACCCCCCCCCACAGGCGG
AACCTCTATAAATCAAACGGCTACACAAACCTCTTTTTCTCCCC
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