DY270906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 2.216e-23 Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 502 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI*QKQKNPPLS 894 E S + K E+ + R EIE SPSR DGID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF R+SHA +DR K E PRPL DV+ S +I K K+P S Sbjct: 13 ESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINK-KDPGAS 142
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.447e-23 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI*QKQ 876 + SR EIE SPSR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRF++R+SHA +DR K E PRPL DV+ S +I K+ Sbjct: 37 YFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKK 140
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.436e-22 Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 502 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI*QKQ 876 E S + K ++ + R EIE SPSR D ID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF+R+SHA +DR K E PRPL DV+ S +I K+ Sbjct: 13 ESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKK 137
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.179e-22 Identity = 58/108 (53.70%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 538 SKLEDDE--PVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKAS 855 S L DDE P F SR+EIER SPSR+DGID ET LR SYC F++ LG RL++PQ TI TA+ CHRFF+R+SHA +DR K E P L DV+ AS Sbjct: 21 SNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIAS 128
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 5.458e-22 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI*QKQ 876 + SR EIE S SR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRFF+R+SHA +DR K E PRPL DV+ S +I K+ Sbjct: 38 YFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKK 141
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 3.537e-21 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI 864 + SR+EIERFSPSRKDGID ++E+ LR SYC F+Q LG++L + Q TI AMV+CHRF++R+SHA +D K+E +P L+ V+ AS +I Sbjct: 35 YFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEI 134
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 3.311e-19 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVL 846 +++RDE+ER SPSR+DG+ A +E LR +YC+FI+++GLRL+LPQ TI TA +LCHRF++R+SHA ++ K E P PL V+ Sbjct: 10 YVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVI 103
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.623e-16 Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKAS 855 + +R+E+E+FSPSRKDGI + E+ +R YC+FI+++G+RL+LPQ TI TA++ CHRF++ +S A + K E P PL+ V++ + Sbjct: 19 YFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVA 115
BLAST of DY270906 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.633e-16 Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEGKPRPLNDVLKASSKI 864 + +R+ IE+ SPSR DGI+ ET R+SY +F+Q LG RL PQ TI TA+VLC RFF R+S +D K EG PRP DV+ S ++ Sbjct: 8 YNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRV 107 The following BLAST results are available for this feature:
BLAST of DY270906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270906 ID=DY270906; Name=DY270906; organism=Citrus clementina; type=EST; length=1073bpback to top |