DY270992

Overview
NameDY270992
Unique NameDY270992
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270992 vs. ExPASy Swiss-Prot
Match: KHA1_SCHPO (K(+)/H(+) antiporter 1 OS=Schizosaccharomyces pombe GN=kha1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.518e-39
Identity = 98/258 (37.98%), Postives = 140/258 (54.26%), Query Frame = -3
Query:   10 KRPFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDXXXXXXXXXXXXXAGDGTASSGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIP 783
            K   ++    I +PF  G G++  L        +  +G FL+F+  A+SITAFPVLARIL+EL LL  RVG   +SA   ND                G        S V A+++LL  L + +F+   I+P +  +A +     D   E++IC+ L+ V+VS F TD+IGIH IFG F+ G  IP   +   ++ E+IED V+ L LPLYFASSGLKT+++T+   K WG     I  A A K+  +   A +LK+P
Sbjct:  122 KVTLLVTVFSIVIPFGAGAGISAGLYKFTTR--EFEFGKFLLFISTAMSITAFPVLARILSELHLLHKRVGVIVLSAGIGNDVIGWILLALSVTLVNSG--------SGVRAVYILLLALGWCLFLFIAIKPLVYLLAVKTRSLKDKPSESFICIVLSMVLVSAFFTDIIGIHPIFGGFLVGTIIPHENDLTVKITEKIEDLVNCLFLPLYFASSGLKTNISTLNTGKIWGYTIGTICVAIASKMGSSMLAARILKMP 369          
BLAST of DY270992 vs. ExPASy Swiss-Prot
Match: KHA1_YEAST (K(+)/H(+) antiporter 1 OS=Saccharomyces cerevisiae GN=KHA1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.861e-29
Identity = 79/266 (29.70%), Postives = 132/266 (49.62%), Query Frame = -3
Query:    1 KRPFVIAFAGISLPFVCGIGVAFVL----RNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDXXXXXXXXXXXXXAGDGTASSGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVM-VSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARE 783
            K+  VI    +++PF  G  +A  L     N  +G   + +  F+VF+ V++S+TAFPVL RIL EL+L+  R G   ++A   ND                    S  + SPV  +++LL   A+ +     ++  +RWV  R              + +  +M +S + TD+IG+H IFGAF+ GL +P+  ++  +L ER+ED  + + +P+YFA +GL  D+  + + + WG +   I  A   KI+     A +  +  RE
Sbjct:  115 KKALVIGIVTLAVPFGFGCLLAIPLFHTYANKTEGERHIKFSVFMVFIAVSISVTAFPVLCRILNELRLIKDRAGIVVLAAGIINDIMGWILLALSIIL-------SSAEGSPVNTVYILLITFAWFLIYFFPLKYLLRWVLIRTHELDRSKPSPLATMCILFIMFISAYFTDIIGVHPIFGAFIAGLVVPRDDHYVVKLTERMEDIPNIVFIPIYFAVAGLNVDLTLLNEGRDWGYVFATIGIAIFTKIISGTLTAKLTGLFWRE 373          
BLAST of DY270992 vs. ExPASy Swiss-Prot
Match: CHX13_ARATH (K(+)/H(+) antiporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.911e-15
Identity = 68/259 (26.25%), Postives = 114/259 (44.02%), Query Frame = -3
Query:   28 AAKRPFVIAFAGISLPFVCG-IGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDXXXXXXXXXXXXXAGDGTASSGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGL----LALVITTACAGKILGTFAVA 789
            A  +  +I  A  + PF  G + + F+ +      D +      + +    S+T+FPV   +LAEL +L + +G  A   +   +               D T +S    S +I       GL  VI+   V RP + W+ +R +   D  D       L  + ++    + +G+H+ FGAF  G+++P G      L  ++E F S L LP + A SGL+T+   I ++    +    + L+IT  C  K LGT A +
Sbjct:  142 AGSKAILIGTASYAFPFSLGNLTIMFISKTMGLPSDVISCTSSAISLS---SMTSFPVTTTVLAELNILNSELGRLATHCSMVCEVCSWFVALAFNLYTRDRTMTSLYALSMII-------GLLLVIYF--VFRPIIVWLTQRKTKSMDKKDVVPFFPVLLLLSIASLSGEAMGVHAAFGAFWLGVSLPDGPPLGTELAAKLEMFASNLFLPCFIAISGLQTNFFEITESHEHHVVMIEIILLITYGC--KFLGTAAAS 386          
The following BLAST results are available for this feature:
BLAST of DY270992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
KHA1_SCHPO1.518e-3937.98K(+)/H(+) antiporter 1 OS=Schizosaccharomyces pomb... [more]
KHA1_YEAST1.861e-2929.70K(+)/H(+) antiporter 1 OS=Saccharomyces cerevisiae... [more]
CHX13_ARATH9.911e-1526.25K(+)/H(+) antiporter 13 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YI02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270992 ID=DY270992; Name=DY270992; organism=Citrus clementina; type=EST; length=995bp
CTCTCTCGCCGGTATCTTAAGCATCACGGCCACAGCAAATGTTCCAAGAA
TCTTGCCCGCACATGCTGTTGTTATCACAAGCGCCAACAGCCCCCACGAC
TTTGCGTCGCGTATGGTGGCCACGTCAGTCTTTAATCCACTCGACGCAAA
GTAAAGCGGAAGCAGCAAGCCCGACACGAAATCTTCAATCCTCTCAATCA
ATCTCTCCGCAAAATTTCCTCCTTTCGGAATCGTTAGTCCGAAAACGAAT
GCCCCAAATATAGAATGGATTCCTATTAGGTCAGTCATGAATCCGGATAC
CATGACGCCAGCTAACGTTAAGCAAATGTAAGCTTCATCTACGACGTCGT
GTTCAGGAGAGCAGCGGCGGGCGACCCATCTCATGGCCGGCCGGATGACT
GTCAACATGAAGATAACAAAAGCGAGGCCGGAGAGGAGTACCCATATGGC
TATAACTGGGCTCTTCTTTTCTCCGCTGGAAGCGGTGCCGTCTCCGGCTA
TGGCAACGGCTAGGGCTAGGAGGATCCACGCTGCGACATCGTTGAATGCT
GCGGCGGACATGGCGGTTTCGCCTACTCGAGTTGTGAGGAGCTTGAGCTC
TGCTAATATACGGGCGAGGACAGGAAAGGCTGTGATGGAGAGAGCGACGC
CCATGAAGACCAAGAATGGGCCGTAGCCAACTTGGTCAAGGCCGTCAATG
GTGTTTCTGAGGACGAACGCGACGCCGATGCCACAGACGAAAGGCAAAGA
GATTCCCGCAAAAGCTATGACAAAAGGCCTTTTTGCCGCTCCGTCGAATT
TGAGCTCAAGTCAAACCTCAAGGCCAACAAAAAAAAAGGAAGAAGAAAAA
ACCTTATGCTTGCCCCTGAATTCGAGCCGTCGAATTGGCCCATTTTGGGA
AATAGGTGAAGGCATAAACTTCTTTTGTTTCGGCCCAAAAACCGGAAGGG
CCCCGCCCAAATTTTCCCCCCTGAAAGAAAAAAATTTACCCCCCC
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