DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.643e-27
Identity = 80/138 (57.97%), Postives = 91/138 (65.94%), Query Frame = 1
Query:   76 STTQIHSLGNIPLSSRRIKAASFQSSAPRTAFFGQALGRKPHFGLPNAAFLKLNNE---KNNTRRRCNVGPVRVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            S+ QIH LG    SS  +K  S  S   +T FFGQ L    H     AAF KL+++   K  T        +RVV+EKVVGIDLGTTNSAVAAMEGGKPTI+TNAEGQRTTPSVVA TK  D+LV QIA R AVVN +
Sbjct:    3 SSAQIHGLGTASFSS--LKKPSSISGNSKTLFFGQRLNSN-HSPFTRAAFPKLSSKTFKKGFT--------LRVVSEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPE 129          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_EMIHU (Chaperone protein dnaK OS=Emiliania huxleyi GN=dnaK PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.480e-17
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++TN+EGQRTTPSVVA TK  D LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPTVITNSEGQRTTPSVVAYTKKGDLLVGQIAKRQAVINPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 5.524e-17
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K+VGIDLGTTNS VA MEGGKPT++TNAEG RTTPSVVA TK  D+LV QIA R AV+N
Sbjct:    3 KIVGIDLGTTNSVVAVMEGGKPTVITNAEGFRTTPSVVAYTKTGDRLVGQIAKRQAVLN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNPX (Chaperone protein dnaK2 OS=Synechococcus sp. (strain WH8102) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 7.214e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS V+ MEGGKPT++ NAEG RTTPSVVA TK +D+LV QIA R AV+N D
Sbjct:    3 KVVGIDLGTTNSCVSVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPD 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.422e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA TK +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PROM5 (Chaperone protein dnaK OS=Prochlorococcus marinus (strain MIT 9515) GN=dnaK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.422e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA TK +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMP (Chaperone protein dnaK2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.422e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA TK +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.422e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA TK +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_GUITH (Chaperone protein dnaK OS=Guillardia theta GN=dnaK PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.231e-16
Identity = 45/61 (73.77%), Postives = 49/61 (80.33%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVVA TK  D+LV QIA R AV+N D
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPAVIQNAEGFRTTPSVVAYTKTGDRLVGQIAKRQAVINPD 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMM (Chaperone protein dnaK2 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.231e-16
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVVA TK +D+LV QIA R AV+N D
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPVVIANAEGFRTTPSVVAYTKNQDQLVGQIAKRQAVMNTD 63          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
HSP7S_PEA2.643e-2757.97Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK_EMIHU2.480e-1775.41Chaperone protein dnaK OS=Emiliania huxleyi GN=dna... [more]
DNAK_CYAPA5.524e-1776.27Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK2_SYNPX7.214e-1773.77Chaperone protein dnaK2 OS=Synechococcus sp. (stra... [more]
DNAK_PROMT9.422e-1773.77Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_PROM59.422e-1773.77Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK2_PROMP9.422e-1773.77Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK2_PROMA9.422e-1773.77Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_GUITH1.231e-1673.77Chaperone protein dnaK OS=Guillardia theta GN=dnaK... [more]
DNAK2_PROMM1.231e-1673.77Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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