DY271004

Overview
NameDY271004
Unique NameDY271004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1207
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 3.373e-63
Identity = 113/240 (47.08%), Postives = 166/240 (69.17%), Query Frame = 1
Query:  106 DNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREKLQIFHGICRHPKLTQKF*KASKAGIFYSFLQKK 825
            D+   T  V+LST VA+C +F++GC+ GY+S AE+ +  +L LS+ Q+S FGS L  GG +G+L +G++A + GRR  +W  + FC+ GWL+IAF+K+V+ L LGR SLGIG+ +I+YV+PVY+AEITPK++RGAFTA+NQ L  SG+S++Y  GT+++WR +A+I A+PC+LQ +G+ FIP+SPRWLAKI   K+++     LR K     G     ++  K  +      F    QKK
Sbjct:   22 DDRRITACVILSTFVAVCSAFSYGCAAGYTSGAETAIMKELDLSMAQFSAFGSFLNVGGAVGALFSGQLAVILGRRRTLWACDFFCVFGWLSIAFAKNVFWLDLGRISLGIGVGLISYVVPVYIAEITPKHVRGAFTASNQLLQNSGVSLIYFFGTVINWRVMAVIGAIPCILQTIGIFFIPESPRWLAKIRLSKEVESSLHRLRGKDTDVSGEAAEIQVMTKMLEEDSKSSFSDMFQKK 261          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: ERDL3_ARATH (Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 4.123e-61
Identity = 107/200 (53.50%), Postives = 150/200 (75.00%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLR 720
            T VV+ ST V++CGSF  GC+ GYSS A++G+  DLGLSV QYS+FGS++TFGG+IG++ +GK+AD+ GR+G MW +++FCI GW+A+A +KD   L +GR S G  + +++YVIPVY+AEITPK++RGAF   NQ +   G+S+ Y++G  V WR LALI  +PC LQVV L FIP+SPR L K G +K+ +   ++LR
Sbjct:   29 TAVVLFSTFVSVCGSFCFGCAAGYSSVAQTGIINDLGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRKGTMWFAQIFCIFGWVAVALAKDSMWLDIGRLSTGFAVGLLSYVIPVYIAEITPKHVRGAFVFANQLMQSCGLSLFYVIGNFVHWRNLALIGLIPCALQVVTLFFIPESPRLLGKWGHEKECRASLQSLR 228          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 5.384e-61
Identity = 113/234 (48.29%), Postives = 160/234 (68.38%), Query Frame = 1
Query:   25 IAKSSLAQPNPIKITNEVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREK 726
            ++K+S A   P+   N  G +   P         +V LST VA+CGSFA G   GYSSPA++ +R DL L++ ++S+FGS+LTFG +IG++ +G IAD+ GR+GAM +S  FC+VGWLAI F+K V +L LGR + G G+   +YV+P+++AEI PK  RGA T  NQ LI +G+SV +++GT+V+WR LALI  +PC    +GL FIP+SPRWLAK+G+  + +   R LR K
Sbjct:    1 MSKASDAVREPLVDKNMAGSKPDQPW--------MVYLSTFVAVCGSFAFGSCAGYSSPAQAAIRNDLSLTIAEFSLFGSLLTFGAMIGAITSGPIADLVGRKGAMRVSSAFCVVGWLAIIFAKGVVALDLGRLATGYGMGAFSYVVPIFIAEIAPKTFRGALTTLNQILICTGVSVSFIIGTLVTWRVLALIGIIPCAASFLGLFFIPESPRWLAKVGRDTEFEAALRKLRGK 226          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.567e-60
Identity = 105/193 (54.40%), Postives = 147/193 (76.17%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIK 699
            T  V+LST +A+CGSF+ G S+GY+S AE G+  DL LS+ Q+S F S+ T G  IG+L +GK+A + GRR  MW+S+L CI+GW +IAF+KDV  L  GR S GIGL +I+YV+PVY+AEI+PK++RG FT TNQ L  SG++++Y  G  ++WR LAL+ A+PC +QV+GL F+P+SPRWLAK+G  K+++
Sbjct:   32 TACVILSTFIAVCGSFSFGVSLGYTSGAEIGIMKDLDLSIAQFSAFASLSTLGAAIGALFSGKMAIILGRRKTMWVSDLLCIIGWFSIAFAKDVMWLNFGRISSGIGLGLISYVVPVYIAEISPKHVRGTFTFTNQLLQNSGLAMVYFSGNFLNWRILALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELE 224          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.046e-60
Identity = 107/207 (51.69%), Postives = 154/207 (74.40%), Query Frame = 1
Query:  106 DNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREK 726
            D+   T  V+LST VA+C SF++GC+ GY+S AE+ +  +L LS+ Q+S FGS L  GG +G+L +G++A + GRR  +W  +LFCI GWL+IAF+K+V  L LGR SLGIG+ + +YV+PVY+AEITPK++RGAF+A+   L  SG+S++Y  GT+++WR LA+I A+PC + V+G+ FIP+SPRWLAKIG  K+++     LR K
Sbjct:   13 DDRRITACVILSTFVAVCSSFSYGCANGYTSGAETAIMKELDLSMAQFSAFGSFLNLGGAVGALFSGQLAVILGRRRTLWACDLFCIFGWLSIAFAKNVLWLDLGRISLGIGVGLTSYVVPVYIAEITPKHVRGAFSASTLLLQNSGISLIYFFGTVINWRVLAVIGALPCFIPVIGIYFIPESPRWLAKIGSVKEVENSLHRLRGK 219          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 2.955e-59
Identity = 105/221 (47.51%), Postives = 158/221 (71.49%), Query Frame = 1
Query:   64 ITNEVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREK 726
            +T+E  E+     S+N+ +  +V+ ST VA+CGSF  G  VGYS+P +S +R DL LS+ ++S+FGS+LT G ++G++++GKI+D +GR+GAM  S  FCI GWLA+ F+K    L +GRF  G G+ + +YV+PVY+AEI+PKN+RG  T  NQ +I+ G SV +L+G+++SW+ LAL    PC++ + GL FIP+SPRWLAK G +K+ ++  + LR K
Sbjct:   26 LTHEDDEKE----SENNESYLMVLFSTFVAVCGSFEFGSCVGYSAPTQSSIRQDLNLSLAEFSMFGSILTIGAMLGAVMSGKISDFSGRKGAMRTSACFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNLRGGLTTLNQLMIVIGSSVSFLIGSLISWKTLALTGLAPCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGK 242          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 1.123e-58
Identity = 102/193 (52.85%), Postives = 142/193 (73.58%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIK 699
            T  V+LST VA+CGSF+ G + GY+S AE+G+  DL LS+ Q+S FGS  T G  IG+L  G +A V GRRG MW+S+  CI GWL+IAF+K+V  L  GR   GIG  + +YV+PVY+AEITPK++RG FT +NQ L  +G++++Y  G  ++WR LAL+ A+PC +QV+GL F+P+SPRWLAK+G  K+++
Sbjct:   28 TACVILSTFVAVCGSFSFGVATGYTSGAETGVMKDLDLSIAQFSAFGSFATLGAAIGALFCGNLAMVIGRRGTMWVSDFLCITGWLSIAFAKEVVLLNFGRIISGIGFGLTSYVVPVYIAEITPKHVRGTFTFSNQLLQNAGLAMIYFCGNFITWRTLALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELE 220          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 7.277e-58
Identity = 102/204 (50.00%), Postives = 151/204 (74.02%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLR 720
            +++ T  ++L+T VA+ GSF  G ++GYSSP +S +  +L LSV +YS+FGS+LT G +IG+ ++G+IAD+ GRR  M  SE+FCI+GWLAI  SK    L +GRF +G G+ + ++V+PVY+AEITPK +RG FT  +Q LI  G+SV YL+G+ + WR LALI  +PC++Q++GL  IP+SPRWLAK+GK ++ ++  + LR
Sbjct:   25 SATITTTLLLTTFVAVSGSFVFGSAIGYSSPVQSDLTKELNLSVAEYSLFGSILTIGAMIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLFVIPESPRWLAKVGKWEEFEIALQRLR 228          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL13_ARATH (Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 7.277e-58
Identity = 98/225 (43.56%), Postives = 161/225 (71.56%), Query Frame = 1
Query:   58 IKITNEVGERSGL----PGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLR 720
            +KI  ++    G+     G ++   T +++ +T  A+CG+F++G + G++SPA++G+ A L LS+ ++S FG+VLT GG++G+ ++GK+ADV GRRGA+ +S  FC+ GWL IAFS+  WSL +GR  LG+   + +YV+PVY+ EI PK +RG F+A N  ++ + ++V YL+G+++SW+ LALI+ VPC+ + VGL FIP+SPRWL++ G+ K+ ++  + LR
Sbjct:   25 VKIQEDIESVKGIRVNNDGEEDGPVTLILLFTTFTALCGTFSYGTAAGFTSPAQTGIMAGLNLSLAEFSFFGAVLTIGGLVGAAMSGKLADVFGRRGALGVSNSFCMAGWLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFSAINSLVMCASVAVTYLLGSVISWQKLALISTVPCVFEFVGLFFIPESPRWLSRNGRVKESEVSLQRLR 249          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.117e-57
Identity = 98/205 (47.80%), Postives = 153/205 (74.63%), Query Frame = 1
Query:  106 DNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLR 720
            D+++ TP+++ ST + +  SF  G ++GY++   S + +DL LS+ Q+S+FGS+ TFGG+IG++ + K A   G +  +W+++LFCI GWLAI+ +KD+  L +GRF +GIG+ +I+YV+PVY+AEITPK++RGAFT +NQ L   G++V+Y  G  +SWR LA+I ++PC +QV+GL FIP+SPRWLAK G+ K+ + + + LR
Sbjct:   18 DSANTTPLLIFSTFIIVSASFTFGAAIGYTADTMSSIMSDLDLSLAQFSLFGSLSTFGGMIGAIFSAKAASAFGHKMTLWVADLFCITGWLAISLAKDIIWLDMGRFLVGIGVGLISYVVPVYIAEITPKHVRGAFTFSNQLLQNCGVAVVYYFGNFLSWRTLAIIGSIPCWIQVIGLFFIPESPRWLAKKGRDKECEEVLQKLR 222          
The following BLAST results are available for this feature:
BLAST of DY271004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
EDL11_ARATH3.373e-6347.08Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
ERDL3_ARATH4.123e-6153.50Sugar transporter ERD6-like 3 OS=Arabidopsis thali... [more]
ERDL7_ARATH5.384e-6148.29Sugar transporter ERD6-like 7 OS=Arabidopsis thali... [more]
EDL18_ARATH1.567e-6054.40Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
EDL10_ARATH2.046e-6051.69Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
EDL16_ARATH2.955e-5947.51Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
EDL17_ARATH1.123e-5852.85Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
ERDL5_ARATH7.277e-5850.00Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]
EDL13_ARATH7.277e-5843.56Putative sugar transporter ERD6-like 13 OS=Arabido... [more]
EDL12_ARATH2.117e-5747.80Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271004 ID=DY271004; Name=DY271004; organism=Citrus clementina; type=EST; length=1207bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGGTCTTCATTCC
AAAATCACCAAGATGGCTGGCGAAAATTGGTAAAAAAAAAGACATAAAGC
TACTCTACCGAACCCTTAGGGAAAAACTGCAAATATTTCATGGAATCTGC
CGACATCCAAAATTAACCCAAAAATTTTAAAAAGCCTCGAAAGCCGGAAT
TTTTTATTCTTTTTTACAAAAAAAACCTTTTCCCTCCCCTTTGGTATTGA
AATAAGGAAATGGAACCATATACTGCAACACAGCACATTGCTTATTTCGC
CCACATAACATTTGCATTCCTTGTCTTTTTACAAATCTTTAGGAGGAAAT
CAATATGTAACATCCACCCTTCGCGTAGTGAAAGGCCCACCCTATAAAAA
ATAAATTATTTAAAAATAACCACATAACTCTGCAAGACGGCCATATACAT
AAAAAAAATATCAAAACACTAACTAATAGAGATAAAAGTGCACGATCAGA
CCGCACACAGTGGTGAGTTTGAAAAAACTCAGCAACCAGGACCATTATTA
TTGTCATAGATCTAATACAAAATTAAAACACCAAGGAGAAACTAAAATAG
TATATAG
back to top