DY271021

Overview
NameDY271021
Unique NameDY271021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271021 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 9.568e-13
Identity = 60/163 (36.81%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  354 LQILLSSNKLKSCIRSLYL-ELTGDTTSIIDATAFADLNHLNELRIDNGIELEELKIDYTEIVRKRREPFVFRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIIS----VGKFAETPEMMGHISPF*NLQMLDLQGLPHLKSIFGKPFAFPPSE 827
            LQ LLS  +L S IR L+L E T     I+   A   L  L+ L    G  + E+ ID+   +++   P  F++++ +TI  C  L+D+T+L+ AP L  L +  C  MEE+IS    + K   T E      PF NL  L L GLP L+SI+  P  FP  E
Sbjct:  654 LQRLLSIQRLASSIRRLHLTETTIVDGGILSLNAIFSLCELDIL----GCNILEITIDWRCTIQREIIP-QFQNIRTMTIHRCEYLRDLTWLLLAPCLGELSVSECPQMEEVISKDKAMAKLGNTSE-----QPFQNLTKLVLDGLPKLESIYWTPLPFPVLE 806          
BLAST of DY271021 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.132e-12
Identity = 64/220 (29.09%), Postives = 104/220 (47.27%), Query Frame = 3
Query:  180 ISNSSRLRVLRMFATGRFNFHEAPEDSVLFGGGEVLIQXXXXXXXXXXXXXXXGSYHALQILLSSNKLKSCIRSLYLELTGDTTSIIDATAFADLNHLNELRIDNGIELEELKIDYTEIVRKRREPFV---FRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAETPEMMGHISPF*NLQMLDLQGLPHLKSIFGKPFAFPPSEK 830
            IS  + L+VLR+F +G       PED  +    ++L                 G    L+  LS+ +L SC R+L +E     +S+I   A  D   L EL   +  ++ E+K+   E V     P     F +L +V++  C +L+D+T+L+FAPNL  LR+     ++E+I+  K  +      ++ PF  L+ L L+ +  LK I   P  FP  +K
Sbjct:  623 ISGLTSLKVLRLFVSG------FPEDPCVLNELQLL-------ENLQTLTITLGLASILEQFLSNQRLASCTRALRIENLNPQSSVISFVATMD--SLQELHFADS-DIWEIKVKRNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRVISASDLKEVINKEKAEQQ-----NLIPFQELKELRLENVQMLKHIHRGPLPFPCLQK 821          
BLAST of DY271021 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.357e-12
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  366 LSSNKLKSCIRSLYLELTGDTTSIIDATAFADLNHLNELRIDNGI---ELEELKIDYTEIVR-KRREPFVFRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAETPEMMGHISPF*NLQMLDLQGLPHLKSIFGKPFAFPPSEK 830
            LSS++L SCIR  +L+++ ++             + N  RI   +    L+E  I++      K      F SL  V ++ C +L+++TFL+FAPNLK L +     +E+II+  K A   E  G I PF  L  L L  L  LK+I+  P  FP  EK
Sbjct:  677 LSSHRLMSCIR--FLKISNNSN-----------RNRNSSRISLPVTMDRLQEFTIEHCHTSEIKMGRICSFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHVVSSNQLEDIINKEK-AHDGEKSG-IVPFPKLNELHLYNLRELKNIYWSPLPFPCLEK 820          

HSP 2 Score: 27.7202 bits (60), Expect = 2.357e-12
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  808 LLFPPLKKMEVL*VQSVEKLPLDSNGAK 891
            L FP L+K+ V+   +++KLPLDS   K
Sbjct:  813 LPFPCLEKINVMGCPNLKKLPLDSKSGK 840          
BLAST of DY271021 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.357e-12
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 3
Query:  363 LLSSNKLKSCIRSL-YLELTGDTTSIIDATAFADLNHLNELRIDNGIELEELKIDYTEIVRKRREPFV---FRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAETPEMMGHISPF*NLQMLDLQGLPHLKSIFGKPFAFP 818
            LL S +L  CI+ + +  L  ++  ++      +L  L   R      + E+KI+ T     R +      F +L RV IA+CH LKD+T+L+FAPNL  L + +   +E+IIS  K     E    I PF  L+ L L  L  LK I+ K   FP
Sbjct:  677 LLCSQRLVECIKEVDFKYLKEESVRVLTLPTMGNLRKLGIKRCG----MREIKIERTTSSSSRNKSPTTPCFSNLSRVFIAKCHGLKDLTWLLFAPNLTFLEVGFSKEVEDIISEEK---AEEHSATIVPFRKLETLHLFELRGLKRIYAKALHFP 825          

HSP 2 Score: 25.7942 bits (55), Expect = 2.357e-12
Identity = 16/41 (39.02%), Postives = 22/41 (53.66%), Query Frame = 1
Query:  808 LLFPPLKKMEVL*VQSVEKLPLDSNG--AKEPKFCYWGRKK 924
            L FP LK + V   + + KLPLDS    A E    Y+G ++
Sbjct:  822 LHFPCLKVIHVEKCEKLRKLPLDSKSGIAGEELVIYYGERE 862          
BLAST of DY271021 vs. ExPASy Swiss-Prot
Match: DRL24_ARATH (Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana GN=At4g14610 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.058e-11
Identity = 59/180 (32.78%), Postives = 82/180 (45.56%), Query Frame = 3
Query:  339 GSYHALQILLSSNKLKSCIRSLYLELTGDTTSIIDATAFADLNHLNELRID--NGIELEELKI-----------------DYTEIVRKRREPFVFRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAE-TPEMMGHISPF*NLQMLDLQGLPHLKSIFGKPFAFP 818
            G Y  +  LLS       +++L L+ +     +  A     L H+  L ID  + +E E  KI                    EI  + R    F SL +V I +C  LK++T+L+FAPNL  L   +   +E+IIS  K A  T E    I PF  L+ L L  LP LKSI+  P +FP
Sbjct:  484 GEYAGVSKLLS-------LKTLRLQKSKKALDVNSAKELQLLEHIEVLTIDIFSKVEEESFKILTFPSMCNIRRIGIWKCGMKEIKVEMRTSSCFSSLSKVVIGQCDGLKELTWLLFAPNLTYLDARFAEQLEDIISEEKAASVTDENASIIIPFQKLECLSLSDLPKLKSIYWSPLSFP 656          
The following BLAST results are available for this feature:
BLAST of DY271021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DRL38_ARATH9.568e-1336.81Probable disease resistance protein At5g47260 OS=A... [more]
DRL40_ARATH2.132e-1229.09Probable disease resistance protein At5g63020 OS=A... [more]
DRL19_ARATH2.357e-1233.96Putative disease resistance protein At1g63350 OS=A... [more]
RPS5_ARATH2.357e-1233.97Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL24_ARATH1.058e-1132.78Probable disease resistance protein At4g14610 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YJ13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271021 ID=DY271021; Name=DY271021; organism=Citrus clementina; type=EST; length=1238bp
CAAACTGTTCGAATTTGAAATTACCTGTTGGGATGTCAGAGTTGGGTTCA
TCACTAGAACTTCTTGATATTTCAGAAAACAGCACAAGAGAGTTACCGGA
AGAGTTAAAGAAGTTGGTAAATCTGAAATGTTTGAATTTGAGGTGGACAG
AGCATTTAAATAAAATTCCACGGCAACTAATATCAAATTCTTCAAGGTTA
CGTGTGTTGAGAATGTTCGCTACTGGCCGGTTCAATTTTCATGAAGCACC
AGAAGACAGCGTTTTATTTGGTGGGGGTGAAGTTTTGATACAGGAATTGC
TCGGTTTGAAATATTTAGAGGTATTGGAGTTGACCTTGGGAAGTTATCAT
GCTCTCCAAATTCTTTTGAGCTCAAATAAGTTAAAAAGTTGTATTCGATC
TCTTTACCTCGAGTTGACCGGAGATACAACGTCAATTATTGATGCTACGG
CTTTCGCAGATCTAAACCACCTCAATGAATTACGGATTGATAATGGTATT
GAGTTGGAAGAGTTGAAGATTGATTATACGGAGATAGTACGAAAAAGGCG
GGAACCTTTTGTTTTCCGCAGCCTTCAACGTGTTACCATAGCGGAGTGCC
ATAAATTGAAAGATGTGACATTCCTCGTTTTTGCTCCAAACCTCAAGTCT
CTTCGGCTATTCTATTGCGGTGCTATGGAAGAAATAATCAGCGTCGGAAA
ATTTGCTGAGACTCCCGAGATGATGGGACATATAAGCCCTTTTTGAAATC
TCCAAATGCTTGATTTACAAGGGTTGCCCCATTTGAAGAGCATCTTCGGG
AAACCATTTGCTTTTCCCCCCTCTGAAAAAAATGGAGGTACTTTAGGTGC
AATCGGTTGAAAAGCTTCCCCTCGATTCCAACGGGGCAAAGGAGCCCAAA
TTTTGTTATTGGGGGAGAAAAAAAAGGGGGGAACCCACTTTCATGGGGGG
AGAAAACCCCCCCCAATGGCTTTTCGTTCCCGGTTTAAAAGGTAGGCCTT
TTTTTATATCTTTAATCGGGGAAAAGGGGTTTAATTTCCCGGGCCCAAAA
AACAAACGAAAAAAAAAAATAAAAGACTAACAAAAAAGCCCCCCACAATA
ATTTTCCCCGGTAAAAAAAATATTAATTATGAAATGGGGAAGGGCGCCCC
CCCCTCTCGGAAGTGTAAAACAAAAAAAATAAAACCGTACGGAAAAAATA
AATTACGTTTAGTAATATACTATCGCCCCCCCCTCCCC
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