DY271025

Overview
NameDY271025
Unique NameDY271025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1258
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271025 vs. ExPASy Swiss-Prot
Match: Y2179_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Dictyostelium discoideum GN=DDB_G0282179 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.183e-12
Identity = 44/141 (31.21%), Postives = 74/141 (52.48%), Query Frame = 1 
Query:   55 IKFKLAIVLSLCLIVDLARATDVKYCDKNADYDVKVRGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYF---GWHIHSETH-DLCDETSCPVSTGDFVVAHSQVLPGFTPPGTYSLKMKMYDATKKQELTCITF 465
            IK  L ++++  LI+ +       YCD N +   K+  + + P P   G+E T S+  + ++ I+ G  + +V++F   GW      H D+C   SCPVS G F  + S  +P FTP G Y  ++ + D + +  +TC+TF
Sbjct:    2 IKTILLLLINFMLIL-IVNGDIWNYCDGNINPTFKINKLTLLPDPPLVGKEVTISLEGSLNEQITSGSSIFNVAFFINGGWRQLPTFHNDICKVLSCPVSAGPFTYSTSIKVPIFTPHGQYKGQLTLTDQSNR-NVTCLTF 140
The following BLAST results are available for this feature:
BLAST of DY271025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2179_DICDI2.183e-1231.21Putative phosphatidylglycerol/phosphatidylinositol... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YJ18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271025 ID=DY271025; Name=DY271025; organism=Citrus clementina; type=EST; length=1258bp
TTTAAATCATTCATTAAAATTTTGTAATTTTTTTAAGAATCAATCATGGC
GACGATCAAGTTCAAGCTTGCCATTGTGCTATCGCTTTGCTTGATTGTAG
ATTTGGCCCGAGCTACCGATGTTAAGTACTGCGATAAGAATGCTGATTAT
GATGTGAAGGTTCGTGGAGTTGACATATCCCCTTATCCAGTGGCAAGAGG
CAGGGAGGCTACCTTCAGCATCTCTGCTACTACAGATAAAGCAATCTCCG
GAGGAAAACTGGTGATTGATGTTTCCTACTTTGGGTGGCACATTCACAGT
GAGACACATGATCTTTGTGATGAGACATCCTGCCCTGTGTCAACTGGTGA
TTTTGTGGTTGCTCACTCTCAAGTTTTACCTGGATTCACTCCTCCTGGTA
CCTACTCTCTGAAGATGAAAATGTATGATGCAACCAAGAAGCAAGAGCTA
ACATGCATTACCTTTGACTTCTCCATTGGATTTGCAAGTTCCGTGGCTGA
TAGTTAAGAGCTTTGAAGATGCCTTCGGTTTACCTTTCTGCCATATAAAT
TTGATGTAAAGGAAAATACTCTTTAAAATTAGTTGTTGTATCTACCTTCA
AGTATTGCTGGCGTTATGAAAAATTTCTCTTCTCCTCCGAAAATTAAAAA
TGCTTCAAAGTTTGGAGAAAAGTGATATAAAAAAAAAAAAACAAAAAAAA
AAAATAAAAAAAAAATTAATCCCCCCTTTTTTGAAAAAATTGGGAATTAT
AAAAAAACATTTGTTTATCAATTTTTTTGCAACAAAAAGGTCCCTTTCAT
TCAAAAAAAAATTTTTTTTTTCCCACCCGGCCGAAATCCCCCATAAGAGA
CTCAAATTACAGAGGCATAATCTTGTTCCCAGGGCACCTCCTGGGCCGAG
TTCTCAAAATTCCGAAATTGTAATATGCACAAAAAAAAAAAAAATATCTA
CCCATGGTTAAAAAAAATCCCCTCCGACCCAAAAATGAACATGCGTTTTT
TTTTATATCCAGAATTATTCTAAAACACTATTTTTTTTAAAAAATCCTTT
TTCTTCGTATAAAAAAAAAAAAAAATCTCAAAAATTCGCTCTTACAGAAA
GAGGGAAGAACGACTACGTGTGAAGGTGGCGCTCCGATATTCTTATACAA
TATCCCAAAATAACATAACACTAAAACATTTATAATAATTTTTTCCTCCC
TCACATTAATTAAAATAACGGGTCTTCCCGACGAAATTATAATAACAATC
ACCACTCA
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