DY271032

Overview
NameDY271032
Unique NameDY271032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length645
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271032 vs. ExPASy Swiss-Prot
Match: STR16_ARATH (Thiosulfate sulfurtransferase OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.722e-23
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 1
Query:  109 TVDVRAAKNLLESGGYGYLDVRTAEEFEEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 450
            +V V  A +LL +G + YLDVRT EEF +GH   A   N+PYM     G  KNPDFL++V S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct:   10 SVSVTVAHDLLLAG-HRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNPDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 120          
BLAST of DY271032 vs. ExPASy Swiss-Prot
Match: DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.167e-22
Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 1
Query:  109 TVDVRAAKNLLESGGYGYLDVRTAEEFEEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 447
            +V VR A+ L ++G Y +LDVRT +EF  GH   A   N+PYM+    G VKNP FL++V S  ++ D +++GC+SG RSL A+ +LL AGF  V++  GG++ W +N L V+
Sbjct:   73 SVPVRVARELAQAG-YKHLDVRTPDEFSIGHPSRA--INVPYMYRVGSGMVKNPSFLRQVSSHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVE 182          
The following BLAST results are available for this feature:
BLAST of DY271032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
STR16_ARATH3.722e-2350.88Thiosulfate sulfurtransferase OS=Arabidopsis thali... [more]
DIN1_RAPSA9.167e-2245.13Senescence-associated protein DIN1 OS=Raphanus sat... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271032 ID=DY271032; Name=DY271032; organism=Citrus clementina; type=EST; length=645bp
ATATAACCTTTTAAGTTTGATATGGGTGTTTCCCGCAATTGGGTCACGTT
TTTGCGTGGATTGTTTCTCCTCCTCCTTATCTGTCGTAGCTCTGGAGCTG
AAGTTATTACAGTTGATGTTCGAGCTGCTAAGAATCTGCTTGAATCTGGT
GGGTACGGCTATCTGGATGTGAGGACGGCAGAAGAATTCGAGGAAGGTCA
TGTGGATGCAGCAAAAATCTTCAACATTCCTTACATGTTCAACACTCCAG
AAGGTAGAGTAAAAAATCCAGATTTCTTGAAGAAGGTTAGATCTCTTTGC
AAGGAGGAGGATCGTCTTGTAGTGGGCTGTCAAAGCGGAGCTAGATCTCT
TCATGCGACGGCTGATCTTCTTGGCGCTGGCTTTAAGCATGTAAGCAACT
TTGGAGGTGGGCATATGGCTTGGGTTCAGAACGGATTAAAGGTGAAGGCG
CATGAAAAGCCAGCAGATCATCGATCTGACCTCTGATTAATCATGACTTG
CCATTATTATCACCATGTATTACGCACAGTAGTAATGTCCAGAAAACGAA
CTTGTGGTGGCGCCGTCGTATTTAGTAATTTGTACAATATTTTTATTTTT
GTTCGTTTGTTGCAGAAAAGGATGGGAATTGGATTAAAGTTATGC
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