DY271034

Overview
NameDY271034
Unique NameDY271034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271034 vs. ExPASy Swiss-Prot
Match: YOOF_SCHPO (Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe GN=SPBC887.15c PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.865e-38
Identity = 89/255 (34.90%), Postives = 125/255 (49.02%), Query Frame = 3
Query:  270 APIVVYWLYAGF-----YQMLPPLDNYRLHTKKEEDEKNSVPLSAXXXXXXXXXXXXXXXXXXXFMLTSKADASGITTQA---------SIP-----------------VQILQIIIAMFVMDTWQYFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVIKTVDDHSGLWLPGKIFPLFFQNNTA*YDVHHHFQGLKLNYFQPILFNKGKNFLEIYLP 941
            +P+++YW+ + F     Y  LP  + YR+H  +E   +N VP  A                    M     +      Q          ++P                 V   Q   A F++D+WQYF HRY+H NK LY  IH+ HHRL VPYA+GALYNHP EGL+LDT G  +++L +G++ + AVIFF  + +KTVDDH G   P     +FF NN   +D+HH   G + N+ QP  F    + L  Y+P
Sbjct:   20 SPVIIYWVASAFFGFLHYIELPVFEKYRIHPPEEIARRNRVPQMAVVKAVLFQQLCEVVVGIALAMFEGYPEPIDEAKQMLRYEAFFSKNLPALLQVAPFAPKLAYNFIVPAFQYFFAFFIIDSWQYFWHRYLHYNKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDTFGAGVAYLAAGLSPQQAVIFFTLSTLKTVDDHCGYVFPYDPLQMFFANNARYHDLHHQPYGFQKNFSQP-FFTFWDHVLGTYMP 273          
BLAST of DY271034 vs. ExPASy Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae GN=SUR2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 7.802e-36
Identity = 86/241 (35.68%), Postives = 120/241 (49.79%), Query Frame = 3
Query:  243 VSDEAMGTFAPIVVYWLYAGFYQMLPPL---DNYRLHTKKEEDEKNS-----VPLSAXXXXXXXXXXXXXXXXXXXFMLTS---------KADASGITTQASI------PVQILQIIIAMFVMDTWQYFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVIKTVDDHSGLWLPGKIFPLFFQNNTA*YDVHHHFQGLKLNYFQP 896
            +SD  +   AP+V YW  +G + ++      + YR+H  +E  ++N      V L                       +T          +AD   I   A+I       +  L+I      +DTWQYF+HR MH NK LY+  HS HH L VPYA GAL+N+P+EG LLDTLG  ++  ++ +T R  +I F FA +KTVDDH G  LP   F   F NN   +D+HH   G+K N+ QP
Sbjct:   46 MSDGVLALVAPVVAYWALSGIFHVIDTFHLAEKYRIHPSEEVAKRNKASRMHVFLEVILQHIIQTIVGLIFMHFEPIYMTGFEENAMWKLRADLPRIIPDAAIYYGYMYGMSALKIFAGFLFVDTWQYFLHRLMHMNKTLYKWFHSVHHELYVPYAYGALFNNPVEGFLLDTLGTGIAMTLTHLTHREQIILFTFATMKTVDDHCGYALPLDPFQWLFPNNAVYHDIHHQQFGIKTNFAQP 286          
BLAST of DY271034 vs. ExPASy Swiss-Prot
Match: ERG25_YEAST (C-4 methylsterol oxidase OS=Saccharomyces cerevisiae GN=ERG25 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.106e-13
Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 3
Query:  477 GITTQASIP---VQILQIIIAMFVMDTWQYFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPLEGLLL--DTLGGALSFLV--SGMTARTAVIFFCFAVIKTVDDHSGL---WLPGKIFPLFFQNNTA*YDVHHHF 866
            GIT +   P      L+I +   + DTW Y+ HR  H   F Y++IH QHHR   P+ + A Y HP E L L   T+G  + +++    +   T  ++    + + VD HSG    W   KI P  F      +D+HHH+
Sbjct:  128 GITVEVPFPSLKTMALEIGLFFVLEDTWHYWAHRLFHYGVF-YKYIHKQHHRYAAPFGLSAEYAHPAETLSLGFGTVGMPILYVMYTGKLHLFTLCVWITLRLFQAVDSHSGYDFPWSLNKIMP--FWAGAEHHDLHHHY 264          
BLAST of DY271034 vs. ExPASy Swiss-Prot
Match: ERG25_CANAL (C-4 methylsterol oxidase OS=Candida albicans GN=ERG25 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.985e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:  477 GITTQASIPV---QILQIIIAMFVMDTWQYFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPLEGLL--LDTLGGALSF-LVSG-MTARTAVIFFCFAVIKTVDDHSGLWLPGKIFP-LFFQNNTA*YDVHHHF 866
            GI+ Q   P     ++Q  +   + DTW Y+ HR +H   F Y++IH QHHR   P+ + A Y HP+E  L  L T+G  + + L++G +   T  I+    + + VD HSG   P  +   L F      +D HHH+
Sbjct:  128 GISYQVPFPKITDMLIQWAVFFVLEDTWHYWFHRGLHYGVF-YKYIHKQHHRYAAPFGLAAEYAHPVEVALLGLGTVGIPIVWCLITGNLHLFTVSIWIILRLFQAVDAHSGYEFPWSLHNFLPFWAGADHHDEHHHY 264          
The following BLAST results are available for this feature:
BLAST of DY271034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YOOF_SCHPO2.865e-3834.90Uncharacterized hydroxylase C887.15c OS=Schizosacc... [more]
SUR2_YEAST7.802e-3635.68Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces ... [more]
ERG25_YEAST7.106e-1332.86C-4 methylsterol oxidase OS=Saccharomyces cerevisi... [more]
ERG25_CANAL2.985e-1133.33C-4 methylsterol oxidase OS=Candida albicans GN=ER... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YK03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271034 ID=DY271034; Name=DY271034; organism=Citrus clementina; type=EST; length=1206bp
GTCACAATTGTTTCTTCCTGTTCCCCGATTGGTTGATTCAAAAATCAAGC
GGCTCAAAAGCTAGATAGATCTGAATGTCACTCTCATTCTCTGCCATTTC
AAGGTCATTTTGCGTATCTGCTGAGGTGAACGCAAAGCATTCAGCGTTAG
CTCTTAGACAATAGATGAAGGTTGAAATTTGAGCTGGATTGATTATTTTT
TGCGTGTAAATTGGATCAACAATGGTGTTCTGGGAAGGATATGTGAGTGA
TGAAGCAATGGGGACATTTGCTCCAATAGTAGTGTATTGGTTATATGCAG
GGTTTTATCAAATGTTACCACCTTTGGATAATTACAGGTTACATACTAAA
AAGGAGGAAGATGAGAAGAACTCAGTGCCACTTTCTGCTGTGGTCAAGGG
TGTTTTGCTTCAACAGCTCGTTCAGGCAACAGTTGCACAGTTACTTTTCA
TGTTGACCTCGAAGGCAGACGCATCCGGCATCACAACCCAGGCATCGATT
CCTGTGCAGATTCTGCAGATTATCATCGCGATGTTTGTCATGGATACATG
GCAGTACTTTGTGCACCGATATATGCATCAGAACAAATTCTTGTATCGTC
ATATCCACTCTCAGCACCATAGGCTGGTTGTTCCTTATGCAATCGGCGCC
CTTTACAATCACCCACTTGAGGGACTTTTGCTCGACACTTTGGGTGGAGC
CCTCTCTTTTCTTGTCTCGGGAATGACTGCACGAACAGCCGTGATATTTT
TCTGCTTTGCTGTGATTAAAACTGTTGATGATCACTCTGGGCTTTGGTTG
CCTGGCAAAATCTTTCCCTTGTTCTTCCAAAACAACACCGCTTAATACGA
TGTCCACCATCACTTTCAGGGCTTGAAATTAAACTATTTCCAACCCATTC
TTTTCAATAAGGGGAAAAACTTCTTGGAAATCTACTTGCCTTACAATCTA
AAAAAAGCACCCGAAGGGAGGTTTTGAGGGCCGGCTTAAAAAAAAAAAAA
AAGCCAATTAAAAAAATTTTAACGGTATTATTTTTAGGCCCACTTTTGTA
ACAAAAAAAATTTTTTGGGTCAAGGGTTGTGCCCCTTTCTTGGGGAAAAT
TTAAAACCAAAAAATTTTTTTTTTTTTTGTGGGTCTTTTAAAACCCACTA
AGGGGTTCTCCACCCCAAGGGAGGATATTTATTCTGTTGTTTCCCTTTAT
CTCTTT
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