DY271076

Overview
NameDY271076
Unique NameDY271076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1162
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 5.945e-94
Identity = 166/191 (86.91%), Postives = 181/191 (94.76%), Query Frame = 3
Query:   45 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDT+HVVVAQLL+LESENPSKPIHMYLNSPGG VTAGLAIYDTMQYIRSPI+TICLGQAASM SLLLA+G KG+RR+LPN+T+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALN LY KHTGQ ++V+  NMDRD+FMTPE+AK FGI DEV
Sbjct:   28 RSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEV 218          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_BART1 (ATP-dependent Clp protease proteolytic subunit OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=clpP PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 9.558e-68
Identity = 121/190 (63.68%), Postives = 155/190 (81.58%), Query Frame = 3
Query:   48 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            + SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R ALPN+ IM+HQPSGG+ GQA D+  H + I+++   LN +Y +HTGQ  EVI++ +DRD+FMT E+AK FG+ D+V
Sbjct:    8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQGYEVIERTLDRDHFMTAEEAKAFGLVDDV 197          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_BARQU (ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana GN=clpP PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 9.558e-68
Identity = 120/190 (63.16%), Postives = 155/190 (81.58%), Query Frame = 3
Query:   48 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            + SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R  LPN+ IM+HQPSGG+ GQA D+  H + I+++   LN +Y +HTGQ  EVI++ +DRD+FMT E+AK+FG+ D+V
Sbjct:    8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEEAKQFGLVDDV 197          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_BARHE (ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae GN=clpP PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.248e-67
Identity = 119/190 (62.63%), Postives = 156/190 (82.11%), Query Frame = 3
Query:   48 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            + SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R  LPN+ IM+HQPSGG+ GQA D+  H + I+++   LN +Y +HTGQ+ +VI++ +DRD+FMT E+AK+FG+ D+V
Sbjct:    8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTAEEAKQFGLVDDV 197          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_BARBK (ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=clpP PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 2.129e-67
Identity = 120/190 (63.16%), Postives = 154/190 (81.05%), Query Frame = 3
Query:   48 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            + SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I +Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAASMGSLLL +G KG R +LPN+ IM+HQPSGG+ GQA D+  H + I+R+   LN +Y +HTGQ  E+I+  +DRD+FMT E+AK FG+ D+V
Sbjct:    8 ALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKGHRFSLPNARIMVHQPSGGFQGQASDIERHAQDIIRMKRHLNEIYVQHTGQDYEIIENTLDRDHFMTAEEAKMFGLIDDV 197          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_WOLPM (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia pipientis wMel GN=clpP PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 8.092e-67
Identity = 124/194 (63.92%), Postives = 158/194 (81.44%), Query Frame = 3
Query:   54 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEVYWTKTN 635
            +LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP+K I MY+NSPGG VTAGL+IYDTMQYI   ++T+C+GQAASMGSLLLA+GTKG+R +LP+S IMIHQPSGGY GQA D+ IH  +I+RV   LN +Y KHTG S++ I+  M+RD FM PE+A++ G+ D V   +T+
Sbjct:    2 TLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPNKDICMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARKIGLIDRVIAERTD 195          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_WOLWR (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=clpP PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 1.057e-66
Identity = 124/194 (63.92%), Postives = 157/194 (80.93%), Query Frame = 3
Query:   54 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEVYWTKTN 635
            +LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP K I MY+NSPGG VTAGL+IYDTMQYI   ++T+C+GQAASMGSLLLA+GTKG+R +LP+S IMIHQPSGGY GQA D+ IH  +I+RV   LN +Y KHTG S++ I+  M+RD FM PE+A++ G+ D V   +T+
Sbjct:    2 TLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDICMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARKIGLIDRVIAERTD 195          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_EHRCR (ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia chaffeensis (strain Arkansas) GN=clpP PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 1.057e-66
Identity = 124/188 (65.96%), Postives = 151/188 (80.32%), Query Frame = 3
Query:   54 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            +L+PMV+E +SRGERAYDI+SRLLKERII I GPI D  A ++VAQL+FLESENP K I MY+NSPGG VTAGL+IYDTMQYI+  ++T+CLGQAASMGSLLLA+G  G R ALPNS IMIHQPSGG+ GQA D+ IH K+I+ +   LN +Y KHTG+ +  +  NM+RD FM  EKAK+FGI D+V
Sbjct:    2 TLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMIHQPSGGFQGQATDIEIHAKEILDIKGRLNDIYVKHTGRDLSEVVANMERDNFMRAEKAKDFGIIDKV 189          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_WOLTR (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=clpP PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.380e-66
Identity = 122/188 (64.89%), Postives = 155/188 (82.45%), Query Frame = 3
Query:   54 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            +LIP+VIE +SRGERAYDI+SRL+KERII + GP+ D+ A V+VAQLLFLESENP K I+MY+NSPGG VTAGL+IYDTMQYI+  ++T+C+GQAASMGSLLLA+GT+G+R +LP+S IMIHQPSGGY GQA D+ IH  +I+RV   LN +Y KHTG S++ I+  M+RD FM PE+A+  G+ D V
Sbjct:    2 TLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQGQATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARRIGLIDRV 189          
BLAST of DY271076 vs. ExPASy Swiss-Prot
Match: CLPP_EHRCJ (ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia canis (strain Jake) GN=clpP PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 2.354e-66
Identity = 124/188 (65.96%), Postives = 151/188 (80.32%), Query Frame = 3
Query:   54 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEKAKEFGIFDEV 617
            +L+PMV+E +SRGERAYDI+SRLLKERII I GPI D  A +VVAQL+FLE+ENP K I MY+NSPGG VTAGL+IYDTMQYI+  ++T+CLGQAASMGSLLLA+G  G R ALPNS IMIHQPSGG+ GQA D+ IH K+I+ +   LN +Y KHTG+ +  +  NM+RD FM  EKAK+FGI D+V
Sbjct:    2 TLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEICMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMIHQPSGGFQGQATDIEIHAKEILDIKSRLNDIYVKHTGRDLPEVVANMERDNFMRAEKAKDFGIIDKV 189          
The following BLAST results are available for this feature:
BLAST of DY271076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_ARATH5.945e-9486.91ATP-dependent Clp protease proteolytic subunit 2, ... [more]
CLPP_BART19.558e-6863.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BARQU9.558e-6863.16ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BARHE1.248e-6762.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BARBK2.129e-6763.16ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_WOLPM8.092e-6763.92ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_WOLWR1.057e-6663.92ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EHRCR1.057e-6665.96ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_WOLTR1.380e-6664.89ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EHRCJ2.354e-6665.96ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271076 ID=DY271076; Name=DY271076; organism=Citrus clementina; type=EST; length=1162bp
CTAAATTTCTACCATTGTCGAAACCGTCGGCTCAAATTTCAGCTCGTTCG
TTCAGTCTGATACCGATGGTGATCGAGCACTCGTCGCGAGGGGAGAGAGC
GTACGACATATTCTCGAGGCTTCTCAAGGAGAGAATCATCTGCATCAACG
GACCTATCAACGACGACACCGCCCACGTCGTTGTCGCTCAGCTTCTCTTC
TTGGAGTCCGAAAACCCCTCGAAGCCCATTCACATGTACCTCAACTCCCC
CGGCGGCCAGGTCACCGCAGGTCTTGCTATTTACGATACGATGCAGTACA
TTCGATCTCCAATTAATACTATTTGTTTGGGTCAAGCTGCATCCATGGGT
TCCCTGCTTTTGGCCTCGGGTACCAAGGGGGAAAGGCGGGCACTCCCAAA
TTCAACTATCATGATTCATCAGCCATCTGGAGGGTATAGTGGGCAAGCTA
AGGATATGACAATTCATACAAAGCAGATAGTTCGGGTCTGGGATGCACTC
AATGCTTTATATTGTAAGCACACGGGGCAATCAATAGAGGTTATTCAAAA
AAATATGGATAGAGATTACTTTATGACCCCAGAAAAGGCAAAGGAATTTG
GAATATTTGATGAGGTTTATTGGACAAAGACCAATGGTGTTGGTGACTGT
AGCCGGTGGAAGAGGAAGCAAAAAAGGCAATCAGGCAATGAAGTAAAGGG
TCTAAATTGGTACAGAAGGTAATCCTTCGCGAAATGTATCCACAGTATCT
TCCTTCATTTTAATTTTCGTACCCTTTTTTATAAGTGGTAGCGTAATAAG
GACCTAAGATGGAATAGCTTCCTTCTAGGACTGTCACAATGATTAGGCCT
TTGCTTGCGATGCACGTCTCACCAACCCCAACGCCATACAAGGCACTTTT
CTATTCCTTCTTTTTTATATACATCTCCTACTCCTGCCGTACAATTCCTC
GATATGTAATCCCAATAAGCTTATGTGCCCGTTATCCGCGTGTCGTCTAG
TACTTCTCACCTGGGACTTGATCATTACGACTCGATCACCTATTGTTTAT
CTTATTTACATTAGTGATCTAAGATTTTTGTCCTATCTCGATTGTTTGTG
TACTCTTTTTCATTATTATCTAAATAGATAAATTTCTCCGTCCATAATTT
TAGATTTAATTA
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