DY271088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: AB2E_ARATH (ABC transporter E family member 2 OS=Arabidopsis thaliana GN=ABCE2 PE=2 SV=1) HSP 1 Score: 426.787 bits (1096), Expect = 1.114e-118 Identity = 208/253 (82.21%), Postives = 230/253 (90.91%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 M+DRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVT +K+AFISEELCIGCGICVKKCPFEAIQIINLP+DL+KDTTHRYG NTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRF +PPDWQEILT+FRGSELQNYFTRILEDNLKAIIKPQYVDHIP+AV+GNVG+VLDQKDERD KA+LCADL+LNQVI+R+V LSG + +AV+ + +I F+EP YL+VK + Sbjct: 1 MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKLAFISEELCIGCGICVKKCPFEAIQIINLPRDLEKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFTSPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPRAVKGNVGEVLDQKDERDKKAELCADLELNQVIDRDVENLSGGELQR-FAIAVVAIQNAEIYMFDEPSSYLDVKQR 252
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: AB1E_ARATH (ABC transporter E family member 1 OS=Arabidopsis thaliana GN=ABCE1 PE=2 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 2.040e-104 Identity = 181/253 (71.54%), Postives = 213/253 (84.19%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 MSDRLTRIAIVS DRCKPKKCRQECKKSCPVVKTGKLCIEV +K AFISEELCIGCGICVKKCPFEAIQIINLPKDL KDTTHRYG N FKLHRLP+PRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFN PPDW+EILT+FRGSELQ+YF R++E+NLK IKPQ+VD+I + V+GN+G++L++ DER + ++CAD++LNQV+ R ++SG + +A + K I F+EP YL+V+ + Sbjct: 1 MSDRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVGSTSKSAFISEELCIGCGICVKKCPFEAIQIINLPKDLAKDTTHRYGANGFKLHRLPIPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNTPPDWEEILTHFRGSELQSYFIRVVEENLKTAIKPQHVDYIKEVVRGNLGKMLEKLDERGLMEEICADMELNQVLEREARQVSGGELQR-FAIAAVFVKKADIYMFDEPSSYLDVRQR 252
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: ABCE1_MOUSE (ATP-binding cassette sub-family E member 1 OS=Mus musculus GN=Abce1 PE=2 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 1.048e-100 Identity = 175/253 (69.17%), Postives = 209/253 (82.61%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 M+D+LTRIAIV+ D+CKPKKCRQECKKSCPVV+ GKLCIEVTP +KIA+ISE LCIGCGIC+KKCPF A+ I+NLP +L+K+TTHRY N FKLHRLP+PRPG+VLGLVGTNGIGKSTALKILAGK KPNLG++++PPDWQEILTYFRGSELQNYFT+ILED+LKAIIKPQYVD IPKA +G VG +LD+KDE +A +C LDL + RNV +LSG + AV+ + I F+EP YL+VK + Sbjct: 1 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQR-FACAVVCIQKADIFMFDEPSSYLDVKQR 252
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: ABCE1_HUMAN (ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 1.048e-100 Identity = 175/253 (69.17%), Postives = 209/253 (82.61%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 M+D+LTRIAIV+ D+CKPKKCRQECKKSCPVV+ GKLCIEVTP +KIA+ISE LCIGCGIC+KKCPF A+ I+NLP +L+K+TTHRY N FKLHRLP+PRPG+VLGLVGTNGIGKSTALKILAGK KPNLG++++PPDWQEILTYFRGSELQNYFT+ILED+LKAIIKPQYVD IPKA +G VG +LD+KDE +A +C LDL + RNV +LSG + AV+ + I F+EP YL+VK + Sbjct: 1 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQR-FACAVVCIQKADIFMFDEPSSYLDVKQR 252
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: RLI1_YEAST (Translation initiation factor RLI1 OS=Saccharomyces cerevisiae GN=RLI1 PE=1 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 6.807e-92 Identity = 168/259 (64.86%), Postives = 207/259 (79.92%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQG---NVGQVLD---QKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 MSD+ +RIAIVS+D+CKPKKCRQECK+SCPVVKTGKLCIEVTP +KIAFISE LCIGCGICVKKCPF+AIQIINLP +L+ THRY N+FKLHRLP PRPGQVLGLVGTNGIGKSTALKILAGK KPNLGRF++PP+WQEI+ YFRGSELQNYFT++LED++KAIIKPQYVD+IP+A++G VG++L +K D+K + L L V+ R++ +LSG + + + + + F+EP YL+VK + Sbjct: 1 MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYI-KILQLENVLKRDIEKLSGGELQR-FAIGMSCVQEADVYMFDEPSSYLDVKQR 257
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: YOX6_SCHPO (Uncharacterized ABC transporter ATP-binding protein C14F5.06 OS=Schizosaccharomyces pombe GN=SPBC14F5.06 PE=2 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.981e-91 Identity = 157/260 (60.38%), Postives = 201/260 (77.31%), Query Frame = 1 Query: 154 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQ---GNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPKAETG 924 MS+ LTRIAIVS D+C+PKKCRQEC++SCPVV+TGKLCIEV P +IAFISE LCIGCGICVKKCPF AI IINLP +L+ + THRY N+FKLHRLP PRPGQVLGLVGTNGIGKSTALKIL+GK+KPNLGR++NPPDW E++ YFRGSELQN+FT+++EDN+KA+IKPQYVDHIP+A++ V ++ + + ++ DL ++NR VG LSG + +A + + + F+EP YL++K + + G Sbjct: 1 MSESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGICVKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDNIKALIKPQYVDHIPRAIKTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSGGELQR-FAIAAVATQKADVYMFDEPSSYLDIKQRLKAG 259
BLAST of DY271088 vs. ExPASy Swiss-Prot
Match: Y719_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0719 OS=Methanocaldococcus jannaschii GN=MJ0719 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.770e-58 Identity = 112/248 (45.16%), Postives = 164/248 (66.13%), Query Frame = 1 Query: 172 RIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDT-THRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCADLDLNQVINRNVGELSGWRTSKNLPLAVLLDKMPKIIWFEEPPIYLEVKPK 912 R+AI+ DRC+PKKC EC K CP V+ G+ IE+ ISE LC GCGICVK+CPF+AI II LP++L +D H YG N FKL L +PR G V+G++G NGIGKST L+ILAG+L PNLG+ + P++ +++ YFRG+ELQ YF ++ +KAI K QYVD +PK V+G VG +L + DE+ ++ L+L +++R + +LSG + + +A + I +F+EP +L+++ + Sbjct: 14 RLAIIDYDRCQPKKCSMECMKYCPGVRMGEKTIEIDENTGKPVISEVLCSGCGICVKRCPFKAISIIGLPEELSEDKIVHSYGQNRFKLFGLVIPRDG-VVGIIGQNGIGKSTVLRILAGELIPNLGKHDKEPNYDDVIKYFRGTELQEYFEKLKNKGVKAIHKVQYVDILPKVVKGKVGDLLKKVDEKGKFDEVVEKLELKNILDRELSQLSGGELQR-VAIAAAYLRNGDIYFFDEPSSWLDIRQR 259 The following BLAST results are available for this feature:
BLAST of DY271088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271088 ID=DY271088; Name=DY271088; organism=Citrus clementina; type=EST; length=1102bpback to top |