DY271100

Overview
NameDY271100
Unique NameDY271100
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1243
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271100 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 3.371e-66
Identity = 147/321 (45.79%), Postives = 185/321 (57.63%), Query Frame = 2
Query:   65 TYIVHMKHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSD----FGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKNGCFGSDISAGINRAFQNGWNVLSMSLGGGYPTRLTKNHWLLVAFGAKEKGILGPLAPPEKVGPTKASLCQSGSLGIRTVGAGPL 1015
            TYIVHM     PS+F  H +W                     A  GF+  L  ++A +L     V+ V  +  Y LHTTR+P FLG+       F  +  YS         DV++GVLDTGVWPESKS+ D     +P+ W+G CE+G +F+  LCN+KLIGARFF++GY    G   +   E  SPRD DGHGTHT+STAAG  V  ASLLGYASG ARGMA  ARVA YKVCW  GCF SDI A I++A  +  NVLSMSLGGG  +   ++   + AF A E+GIL   +     GP+ +SL  + +  I TVGAG L
Sbjct:   31 TYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAELLYTYEN-AIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEAGSYS---------DVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDES-KESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDILAAIDKAIADNVNVLSMSLGGGM-SDYYRDGVAIGAFAAMERGILVSCS-AGNAGPSSSSL-SNVAPWITTVGAGTL 337          
BLAST of DY271100 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.737e-44
Identity = 104/288 (36.11%), Postives = 154/288 (53.47%), Query Frame = 2
Query:   59 KQTYIVHMKHQAK-PSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKNGCFGSDISAGINRAFQNGWNVLSMSLGGGYPTRLTKNHWLLVAFGAKEKGIL 919
            K  YIV+M  + + P +   H+                       +++GFA  L  ++A+ +   + V+ V+ + +  LHTTRS  FLG    F L+         +   ++++GVLDTG+WPES SFDD      P KW+G CE+  +F    CN+K+IGAR +  G  ++       P +   PRD +GHGTHTASTAAG  V+ A+L G   G ARG    AR+A YKVCW +GC  +DI A  + A  +G +++S+S+GG  P     +   + +F A E+GIL
Sbjct:   31 KNIYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLG----FPLTVPRRS----QVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPIS-------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGIL 300          
BLAST of DY271100 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.791e-42
Identity = 113/307 (36.81%), Postives = 161/307 (52.44%), Query Frame = 2
Query:   56 AKQTYIVHM--KHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCW-KNGCFGSDISAGINRAFQNGWNVLSMSLGGGYPTRLTKNHWLLVAFGAKEKGILGPLAPPEKVGPTKASL 967
            AK  YI+++  +      T  TH +                      A++ FAA L P +A+ + + + V+ V  +    LHTT+S  F+G+     L+A        KA  DVIIGVLDTG+ P+S+SF D  +   P KW+G C    +F+   CN K+IGA++F    ++  G       E  SP D DGHGTHT+ST AGV VANASL G A+G ARG    AR+A YKVCW ++GC   DI AG   A  +G  ++S+S+GG      + +   + +F A  KGIL  +A     GP+  ++
Sbjct:   34 AKDFYIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLP----LTAKRHL----KAERDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNFTG--CNNKIIGAKYFKHDGNVPAG-------EVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARSGCADMDILAGFEAAIHDGVEIISISIGGPI-ADYSSDSISVGSFHAMRKGIL-TVASAGNDGPSSGTV 321          
The following BLAST results are available for this feature:
BLAST of DY271100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH3.371e-6645.79Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME4.737e-4436.11Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH5.791e-4236.81Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YN11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271100 ID=DY271100; Name=DY271100; organism=Citrus clementina; type=EST; length=1243bp
CTTCTTCTTCACCGTACTTCTTCTCCTACCATGCTTGTCACTCTCAGTGA
CGGCGGCCAAGCAAACCTACATAGTTCACATGAAACACCAAGCAAAGCCC
TCAACTTTCTCCACCCACTACGATTGGTACGCATCGAGCGTTCAGTCTCT
CTCATCTTCCACAGATTCTCTTCTGTACACCTACAACACTGCATACGACG
GCTTCGCTGCCTCACTTGACCCAGATCAAGCCCAGGCTCTCCGCCAATCC
GACGCCGTTCTCGGAGTCTACGAGGACACTCTCTACACCCTCCACACTAC
TCGGTCCCCTCAGTTCCTCGGCATAAGCTCTGACTTCGGCTTGTCGGCGG
GCTACAGCAAGCTCGACTTCGACAAGGCCTCCCTTGATGTTATCATTGGT
GTTCTCGACACTGGGGTTTGGCCCGAGTCTAAAAGTTTCGATGACTCCGC
CATGCCTGAGGTTCCAACCAAGTGGCGCGGCCAGTGCGAGTCCGGTCCTG
ATTTTAGTCCCAAACTTTGTAACAAAAAGCTCATTGGCGCTCGTTTTTTC
TCCAAAGGCTACCACATGGCTGGTGGAAGTTTCTCTAAGAAGCCAAACGA
ACCCGAGTCGCCTCGTGATTATGACGGACACGGTACTCACACGGCCAGTA
CGGCCGCCGGCGTACCCGTCGCCAATGCCAGTCTCCTCGGTTACGCCAGC
GGCGTCGCTCGTGGAATGGCCACGCACGCGCGTGTTGCCACCTACAAAGT
TTGCTGGAAAAATGGATGTTTCGGATCCGACATTTCTGCGGGCATAAATC
GGGCCTTTCAGAACGGGTGGAATGTCCTCTCTATGTCCCTCGGTGGGGGA
TACCCCACCCGATTAACAAAAAACCATTGGCTGTTGGTCGCTTTTGGGGC
AAAGGAAAAAGGGATTTTGGGTCCTCTTGCTCCGCCGGAAAAAGTGGGCC
CAACTAAAGCCTCCCTTTGCCAAAGTGGCTCCCTGGGAATCCGAACGGTT
GGGGCCGGCCCTTTAAAAACGCCACTTTCCCCGCCTTAATGTGTTTCCTT
GGAAAAAAAAAAAAAAACCCCCCGGGGGTTCTCACCCTCATAAGACGAAA
ATAGGTAAGGGGGAAAAAAAAAAACCGGAGCCATTTTGGTGTTTTTTCAA
TAAAAGAATGATAAAAAACAAGTATTCTTCTTTTTCTATACTAAAATCGC
GGTGGGTGTTTCTCGTACAGGGAGAACTCAACCCACACCCAAC
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