DY271125

Overview
NameDY271125
Unique NameDY271125
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1302
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.742e-26
Identity = 58/151 (38.41%), Postives = 90/151 (59.60%), Query Frame = 2
Query:   83 FVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            F +++ P R+FKA +LD+ N+ PK+   +IK  E  EGDG  GTIK+I + E  +  Y KH++D++DKE +   Y  IEGD   D+ LE +++E K      GG + K T  +  K  VEIK   ++  K K   +++++ET+LK +P  Y
Sbjct:   10 FTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDT-LEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAY 159          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.056e-25
Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 2
Query:   83 FVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            F + + P ++FKA ILD+ N+ PK+  +++K  E  EGDG VGTIK++ + E  +  Y KHRVD +DK+     Y  IEGD   D ++E + ++IK      GG + K T  +  K  VEIK   ++  K K  G++++VE +L A P  Y
Sbjct:   10 FTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSD-VIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAY 159          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: PRS1_SOLTU (Pathogenesis-related protein STH-21 OS=Solanum tuberosum GN=STH-21 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25
Identity = 61/158 (38.61%), Postives = 98/158 (62.03%), Query Frame = 2
Query:   65 TRVTQSFVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLYA 538
            T  T    T V+P+R+FKAL++DS N+ PKL+   +K+IE  EGDG   +IK++ ++E   I+Y KH++  +D +  + KY  IEGD   D  LE +++++KFE +G GGCVCK   ++  K    +K  D    K + + ++++VE +L A P +YA
Sbjct:    4 TSYTLETTTPVAPTRLFKALVVDSDNLIPKLM-PQVKNIEA-EGDG---SIKKMTFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGDK-LESISYDLKFEAHGNGGCVCKSIAEYHTKGDYVLKDEDHNEGKKQGMELFKIVEAYLLANPSVYA 155          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.525e-24
Identity = 59/158 (37.34%), Postives = 99/158 (62.66%), Query Frame = 2
Query:   65 TRVTQSFVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLYA 538
            T  T    T ++P+R+FKAL++DS N+ PKL+   +K+IE  EGDG   +IK++N++E   I+Y KH++  +D +  + KY  IEGD   D  LE +++++KFE +G GGCVCK   ++  K    +K  +    + + + ++++VE +L A P +YA
Sbjct:    4 TSYTHETTTPIAPTRLFKALVVDSDNLIPKLM-PQVKNIEA-EGDG---SIKKMNFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGDK-LESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPSVYA 155          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.797e-24
Identity = 54/151 (35.76%), Postives = 92/151 (60.93%), Query Frame = 2
Query:   83 FVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            F +++ PSR+FKA +LD+ N+ PK+   +IK  E  EG+G  GTIK+I + E  +  Y KHR+D++D+  +   Y  IEGD   D+ +E +++E K    G G  +  I+  +  K  +EIK   +++ K K  G+++++E++LK +P  Y
Sbjct:   10 FTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLIEGDALTDT-IEKISYETKLVACGSGSTIKSIS-HYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDAY 158          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.409e-23
Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = 2
Query:   83 FVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            F +++ P R+FKA +LD+ N+ PK+   +IK  E  EG+G  GTIK+I + E  +  Y KHRVD++D+  +   Y  IEGD   D+ +E +++E K    G G  +  I+  +  K  +EIK   ++  K K  G+++++E++LK +P  Y
Sbjct:   10 FTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLIEGDALTDT-IEKISYEAKLVASGSGSTIKSIS-HYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDAY 158          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 8.371e-23
Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 2
Query:   83 FVTQVSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            + +++ P R+FKA +LD+ N+ PK+   +IK  E  EGDG  GTIK+I + E  +  Y KH++D++D+  +   Y  IEGD   D+ +E +++E K    G G  +  I+  +  K  VEIK   ++  K K  G+++++E++LK +P  Y
Sbjct:   10 YTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLIEGDALTDT-IEKVSYETKLVASGSGSIIKSIS-HYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDAY 158          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.632e-20
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 2
Query:   89 TQVSPS-RMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            T V P+ R+FKA ILD  N+ PK+   +I S+E  EG+G  GTIK+IN+ E    +Y K RVD +D   F   Y  IEG G +   LE +++EIK      GGCV KI+  +  K   E+K   ++  K     +   VE++L A+   Y
Sbjct:   11 TSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEG-GPVGDTLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.662e-20
Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 2
Query:   77 QSFVTQVSPS-RMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            +S  T V P+ R+FKA IL+  N+ PK+   +I S+E  EG+G  GTIK+IN+ E    +Y K RVD +D   F   Y  IEG G +   LE +++EIK      GGCV KI+  +  K   E+K   ++  K     +   VE++L A+   Y
Sbjct:    7 ESETTSVIPAARLFKAFILEGDNLIPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEG-GPVGDTLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of DY271125 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.131e-19
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   95 VSPSRMFKALILDSHNICPKLLFSSIKSIEYFEGDGDVGTIKQINYIESGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVETHLKAYPQLY 535
            +  +R+FKA ILD   + PK+   ++ S+E  EG+G  GTIK+I + E    +Y K RVD +D+  F   +  IEG G +   LE + +EIK      GG + KI+  F  K   EI    I++ K K +G+ + VE++L A+   Y
Sbjct:   14 IPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEG-GAVGDALEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDAY 159          
The following BLAST results are available for this feature:
BLAST of DY271125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PRU1_PRUAV4.742e-2638.41Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
PRU1_PRUAR1.056e-2538.41Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRS1_SOLTU8.943e-2538.61Pathogenesis-related protein STH-21 OS=Solanum tub... [more]
PRS2_SOLTU1.525e-2437.34Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
MAL11_MALDO5.797e-2435.76Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
PYRC1_PYRCO6.409e-2335.76Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
MAL12_MALDO8.371e-2335.10Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
BEV1D_BETVE6.632e-2038.67Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1G_BETVE8.662e-2037.66Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
MPAG1_ALNGL1.131e-1936.05Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271125 ID=DY271125; Name=DY271125; organism=Citrus clementina; type=EST; length=1302bp
CAACCCTTTTGACTTTTCAAGCTTCAAAAACTTGATCATGATCATCACAA
TGGATGAAAATACCACAAGGGTCACTCAATCATTTGTAACACAAGTCTCC
CCGTCGAGAATGTTCAAAGCCTTAATCCTAGACTCTCACAATATTTGCCC
CAAGCTTTTGTTTTCATCGATCAAGAGTATTGAATATTTTGAAGGCGATG
GAGATGTTGGCACCATCAAACAAATCAATTACATTGAAAGTGGTGAAATT
AGATACACAAAGCATAGGGTCGATGCGCTTGACAAGGAGAAGTTCATGTG
CAAATATAGATTTATCGAAGGCGACGGCTTCATTGATAGCATGCTTGAGT
TTCTTACTCATGAGATAAAGTTTGAAGGCTATGGTCAAGGAGGATGTGTG
TGCAAGATCACATGTGATTTCAAGGCCAAAGAAGGTGTTGAAATCAAGGG
AATTGATATTGAGTTGGTCAAGCACAAGCCTCTTGGGATGTATGAAGTCG
TGGAAACTCACCTTAAAGCATACCCTCAACTCTATGCTTAAACTAATTTT
TTTAACTCTTCTGCTATTTCCTCCTTTAAGGTAATTTAAGTATTTGCCAC
TACTTTGTTAATTGACCTGGTTTTGTTACCCTTGACTCCCGTGAATAAGA
AATAAACATAACACCATCCCTTATCTTGTTGGTATCCTAAACAAATATAA
AAAAAAATAAAAAAACCCCACTTTTTTTTATTAAAAATTTGAGATTTTAT
AAAACATTTGCCTTCCAATTTGGGTCTACGAACAAGATCACGACCTCTTA
AAATAAAGAAACAGTATTTTTTCACTCCCCTATATATCCCCAATAAAAGA
GTCTTTTATACATGGGAATTAGACTTTTTTTCCTGGTCTACTCCCGGGCG
TATGTTTTTCTAATAATTCCTTATATTCACTTTGCTACAAAATAAAAAAT
ATAATTCTCTCCGTACTCTCAATTATCTAACCACCTAAGTACCAACTATT
GAAACTCCCGCTCTCTTTCTTTTCATCCTCTGAAAATCTCTGCAGATCCC
TCTCTATTTTATTAAACAAAAGGCCTTCTTTGTCTGCGACACGACACAAG
TCCAAAATTACCTCGACCCATGGGTTGAGGTCTTCTTATTTTATCTTGAT
ATCTTGGCATTTTTTCTGATTTTCACTTTCGCCATCACTTCTTTACCTCT
CTCTCATATCGACTCATTCCCCCTTATTATCTTATTCCTTTACTGCAATT
TGTCGTCGTATCTAGAAATCCCCTGTCCTACGAAGACCCTCTCCTCTTAT
TA
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