DY271130

Overview
NameDY271130
Unique NameDY271130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1099
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT2_ARATH (Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 5.850e-72
Identity = 122/201 (60.70%), Postives = 149/201 (74.13%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFGKSDIFFLCLLRPLFLYIQKQESEKEGG*MDANWKNMHPHPMSKKRELSKYYI*KMPPQK*TRGGIKGFSP 963
            G+KGVWIKLP +L  L E AVKEGFWFHHAE +YLMLVYWIP   +TLPANASHRVG+GAFV+N  +EVLVVQE +GRF+G GIWKFPTGVV+EGEDI   +VREVKEET +DTEF ++LAFRQ+H++FFGKSD+FF+C+L+PL L I  QESE E       W+     P  +  EL +Y       +  T G  +GF+P
Sbjct:   58 GKKGVWIKLPKQLIGLAETAVKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFDQILAFRQTHKAFFGKSDLFFVCMLKPLSLEINAQESEIEAA-QWMPWEEYINQPFVQNYELLRYMTDICSAK--TNGDYEGFTP 255          

HSP 2 Score: 51.2174 bits (121), Expect = 5.850e-72
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 2
Query:  248 LNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKR 370
            L  + D YGGV+ +M  PMDP LF++LL+SS+S W  Q K+
Sbjct:   20 LPSVQDKYGGVMTEMTHPMDPSLFSTLLRSSLSTWTLQGKK 60          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUD10_ARATH (Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.296e-54
Identity = 114/207 (55.07%), Postives = 141/207 (68.12%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFGKSDIFFLCLLRPLFLYIQKQESEKEGG*MDANW---KNMHPHPMSKKRELSK--YYI*KMPPQK*TRGGIKGFSPR 966
            G+KGVW+ LP+   NLVEPAVKEGF +HHAEP YLMLVYWIP   +T+P NASHRV VGA V+N  +E     E  G   G+GIWK PTGVVDEGE+I  AA+REVKEET IDTEF+E+LAF Q+H+SFF KSD+FF+CLLRP    IQKQ+ E E     A W   ++    P++ K +L K  ++I  M  +K       GFS +
Sbjct:   58 GKKGVWLNLPLSHVNLVEPAVKEGFRYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNKE-----EKYGSLCGSGIWKIPTGVVDEGEEIFAAAIREVKEETGIDTEFLEILAFCQTHESFFAKSDLFFVCLLRPTSFDIQKQDLEIEA----AQWMRFEDSASQPITHKNDLFKDIHHICSMKMEK----SYSGFSKK 251          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT6_ARATH (Nudix hydrolase 6 OS=Arabidopsis thaliana GN=NUDT6 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.263e-54
Identity = 104/186 (55.91%), Postives = 130/186 (69.89%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFG-KSDIFFLCLLRPLFLYIQKQESEKEGG*MDANWKNMHPH---PMSKKRELSKY 903
            G KG+W+KL   L NL+ PA  EGF  HHAE  Y ML  WI    +TLPANASHR+GVGAFV+N K +EVLVVQE  G F+GTG+WK PTGVV EGE+I   A+REV+EET I T+FVEVLAFR+SHQ+F   K+DIFFLC L P    I+KQ+SE     + A W  +  +   P ++K+EL ++
Sbjct:   49 GTKGIWLKLADGLDNLIAPAKAEGFVCHHAEREYTMLTSWIADVPSTLPANASHRIGVGAFVLNKKTKEVLVVQEIDGHFKGTGVWKLPTGVVKEGENIWEGALREVEEETGIKTKFVEVLAFRESHQAFLEIKTDIFFLCELEPTTFEIKKQDSEI----LAAKWMPIEEYVNQPWNQKKELFRF 230          

HSP 2 Score: 40.4318 bits (93), Expect = 7.263e-54
Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 2
Query:  248 LNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKR 370
            L G+ DNYGGV V + EPM  + F   L++S+ +W  Q  +
Sbjct:   11 LQGVPDNYGGVKVNLTEPMTIEDFVPKLRASLVYWSNQGTK 51          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT5_ARATH (Nudix hydrolase 5 OS=Arabidopsis thaliana GN=NUDT5 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 1.211e-48
Identity = 92/155 (59.35%), Postives = 118/155 (76.13%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF-GKSDIFFLCLLRPLFLYIQKQESE 822
            G+KG+WIKLP EL++LV+ A+K+GF +HHAE  Y+ML +W+P   +TLP NASHR+G+GAFV+N   E+LVVQENSG F+   +WK PTG + EGE I   AVREVKEET ID EFVEVL+F +SHQ+ +  K+DIFF+C L      IQKQ+SE
Sbjct:   95 GKKGIWIKLPSELSSLVDTAIKKGFTYHHAENEYVMLTFWLPEPPSTLPCNASHRIGIGAFVLNKNGEMLVVQENSGYFKDKNVWKVPTGTIKEGESIWAGAVREVKEETDIDAEFVEVLSFMESHQAVWQRKTDIFFVCELEARTFEIQKQDSE 249          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT7_ARATH (Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.601e-48
Identity = 102/186 (54.84%), Postives = 129/186 (69.35%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF-GKSDIFFLCLLRPLFLYIQKQESEKEGG*MDANWKNMHPH---PMSKKRELSKY 903
            G+KG+WIKLP+ LANLVE AV EGF +HHAEP YLMLV WI    +T+PANASH VG GA V+N   +EVLVVQE SG F+   +WK PTGV++EGEDI     REV+EET I  +FVEVLAFRQSH++    K+D+FFLC+L P    I +Q+SE     + A W  +  +   P +KK E+ K+
Sbjct:   49 GKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFLCVLSPRSYDITEQKSEI----LQAKWMPIQEYVDQPWNKKNEMFKF 230          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT8_ARATH (Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 8.121e-45
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGA-NTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFGKSDIFFLCLLRPL 792
            G+KGVW+KLP+E + LV  A+KEGF +HHAE  Y+ML YWIP    + LPANASH+VGVG FV+N  +EVLVVQE       TG+WK PTG ++E E+I   AVREVKEET +DTEF EV+AFR +H   F KSD+FF+C+LRPL
Sbjct:  135 GKKGVWLKLPVEQSELVPIAIKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVGVGGFVLNQHKEVLVVQEKYCAPSITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFSEVIAFRHAHNVAFEKSDLFFICMLRPL 279          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT6_RAT (Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus GN=Nudt6 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 6.464e-26
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query:  355 AAGQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS--FFGKSDIFFLCLLRP 789
            A G+   W+ +PI  ++ + PA   GF FHHAEP+   L  W+  G + LP  A+H+VGV   V +   R+VLVVQ+   R +   +WKFP G+ + GEDI   AVREV EET + +EF  +L+ RQ H+S   FG SD++ +C L+P
Sbjct:   84 AEGRIAAWLHIPILQSHFIAPAASLGFCFHHAEPHLSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQD---RNKLKNMWKFPGGLSEPGEDIGDTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLICRLQP 228          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT6_HUMAN (Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens GN=NUDT6 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 2.456e-25
Identity = 65/146 (44.52%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGV-GAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS--FFGKSDIFFLCLLRP 789
            G+  VW+ +PI  +  + PA   GF FHHAE +   L  W+  G + LP  ASH+VGV GA      R++LVVQ+   R +   +WKFP G+ +  EDI   AVREV EET I +EF  VL+ RQ H +   FGKSD++ +C L+P
Sbjct:   89 GRTAVWLHIPILQSRFIAPAASLGFCFHHAESDSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQD---RNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKP 231          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT6_MOUSE (Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus GN=Nudt6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.208e-25
Identity = 62/146 (42.47%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  361 GQKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS--FFGKSDIFFLCLLRP 789
            G+   W+ +PI  ++ + PA   GF FHHA+P+   L  W+  G + LP  A+H+VGV   V +   R+VLVVQ+   R +   +WKFP G+ + GEDI   AVREV EET + +EF  +L+ RQ H+S   FG SD++ +C L+P
Sbjct:   86 GRIAAWLHIPILQSHFIAPAASLGFCFHHAKPHSSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQD---RNKLKNMWKFPGGLSEPGEDIADTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLVCRLQP 228          
BLAST of DY271130 vs. ExPASy Swiss-Prot
Match: NUDT6_XENLA (Nucleoside diphosphate-linked moiety X motif 6 OS=Xenopus laevis GN=nudt6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 7.147e-25
Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 1
Query:  400 ANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQ--SHQSFFGKSDIFFLCLLRPL 792
            + L+  A  EGF FHHAE N   L  W+  G + LP  A+H+VGV   V+   NGK  VLVVQ+   R +    WKFP G+ D+GEDI   AVREV EET I +EF  +L+ RQ  +H   FGKSD++ +C L+PL
Sbjct:    3 SRLISIAASEGFTFHHAERNESTLTLWLKDGPSKLPGYATHQVGVAGAVLDEDNGK--VLVVQD---RNKTVNAWKFPGGLSDQGEDIGATAVREVLEETGIHSEFKSLLSIRQQHNHPGAFGKSDLYIICRLKPL 133          
The following BLAST results are available for this feature:
BLAST of DY271130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NUDT2_ARATH5.850e-7260.70Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2... [more]
NUD10_ARATH4.296e-5455.07Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT... [more]
NUDT6_ARATH7.263e-5455.91Nudix hydrolase 6 OS=Arabidopsis thaliana GN=NUDT6... [more]
NUDT5_ARATH1.211e-4859.35Nudix hydrolase 5 OS=Arabidopsis thaliana GN=NUDT5... [more]
NUDT7_ARATH4.601e-4854.84Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7... [more]
NUDT8_ARATH8.121e-4560.69Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8... [more]
NUDT6_RAT6.464e-2643.24Nucleoside diphosphate-linked moiety X motif 6 OS=... [more]
NUDT6_HUMAN2.456e-2544.52Nucleoside diphosphate-linked moiety X motif 6 OS=... [more]
NUDT6_MOUSE3.208e-2542.47Nucleoside diphosphate-linked moiety X motif 6 OS=... [more]
NUDT6_XENLA7.147e-2547.79Nucleoside diphosphate-linked moiety X motif 6 OS=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YO24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271130 ID=DY271130; Name=DY271130; organism=Citrus clementina; type=EST; length=1099bp
CAAATATTAGTACCTAATTTACGAAGTAAACTAAACGCAAGGGAGGGGTT
GAGGGTCTAGTCCAATTTATTTTAGACGTCAGATGACCTTGCATTTCGCT
CGTTGAAAATCAACGGAAGAATCAGAGTTCAAGGGCGGCGATAAAGGGAA
CACCATTGCTGCAAGACATGCTCGTGTAACAGGTTGTTTCAATATCAGAG
CCATGTCAGCTTCAGTGAATTCGTCATCAGCAACTGTAAACAAATTTCTA
AATGGAATCAACGATAACTATGGAGGTGTTGTCGTTCAAATGAATGAGCC
CATGGATCCTCAGCTTTTTGCTTCACTGCTTAAATCCTCCATCTCACACT
GGAGGCAGCAGGCCAAAAGGGTGTTTGGATCAAGCTACCCATTGAGCTAG
CCAATCTTGTTGAACCTGCAGTTAAGGAAGGATTTTGGTTCCACCATGCA
GAGCCAAATTATTTAATGCTTGTATATTGGATTCCTGGAGGGGCTAATAC
TCTTCCTGCAAATGCCTCTCACCGGGTGGGAGTTGGTGCATTCGTCATGA
ATGGAAAGAGGGAGGTGCTTGTAGTCCAAGAAAATAGTGGGAGATTCCGG
GGGACAGGCATATGGAAGTTTCCTACTGGAGTTGTTGATGAGGGGGAGGA
TATCTGTGTGGCTGCTGTTAGAGAAGTCAAAGAAGAAACATCAATTGACA
CAGAATTTGTTGAAGTACTTGCATTCAGACAAAGCCATCAGTCATTCTTT
GGAAAGTCAGATATATTCTTTTTGTGCCTGTTGCGACCCCTTTTCCTTTA
CATCCAGAAACAGGAATCGGAAAAAGAGGGCGGCTGAATGGATGCCAATT
GGAAAAATATGCACCCCCACCCTATGTCCAAAAAACGGGAACTTTCAAAG
TACTATATTTGAAAAATGCCCCCCCAAAAGTAAACCCGAGGGGGTATCAA
GGGATTTTCCCCCCGGGCCCACCACATTCACTTTTTCCGGGAAAAAAAAA
CAATATTTTTTACTTGAAAAAGGGGGGAACCCCAAAAAGGGGGGTTAAAT
TCTAAATTTTTTGGCCCCCCTTTGGGAAATCTTACCTGGGGAAAAGGGG
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