DY271148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.512e-35 Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = -2 Query: 198 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGDH 449 LGYKTV R+ KGKLII++NN PPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIID GD DIIKS+PGDH Sbjct: 29 LGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.022e-34 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = -2 Query: 201 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGD 449 LGYKTV R+ KGKLII++NN PPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGD DIIK+LPGD Sbjct: 29 LGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.717e-34 Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = -2 Query: 213 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKS 449 LGYKTV R K KL+I+SNN PPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGD DIIK+ Sbjct: 29 LGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107 HSP 2 Score: 36.5798 bits (83), Expect = 1.717e-34 Identity = 16/30 (53.33%), Postives = 21/30 (70.00%), Query Frame = -1 Query: 445 MVLSKKTKRILEGFNNRLVFVMKSGKFIFG 534 MV +KKTK+ + NN+L VMKSGK+ G Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLG 30
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.927e-33 Identity = 67/83 (80.72%), Postives = 73/83 (87.95%), Query Frame = -2 Query: 201 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGD 449 LGYK+V R KGKLI++S N PPLR+SEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSI+DPGD DIIKS+PGD Sbjct: 29 LGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.287e-33 Identity = 67/83 (80.72%), Postives = 74/83 (89.16%), Query Frame = -2 Query: 201 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGD 449 LGYK+V R+ KGKLI++S+N PPLR+SEIEYYAMLAKVGVHHYN NNVDLGTACGKYFRV CLSI+DPGD DIIKSLPGD Sbjct: 29 LGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.324e-33 Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = -2 Query: 201 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGD 449 LGYK+V R+ KGKLI++S+N PPLR+SEIEYYAMLAKVGVH YNGNNVDLGTACGKYFRV CLSI+DPGD DIIK+LPGD Sbjct: 29 LGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_ICTPU (60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.420e-32 Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = -2 Query: 207 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLP 449 LGYK R K KL+IL+NN P LRKSEIEYYAML+K GVHHY+GNN++LGTACGKY+RV L+IIDPGD DII+S+P Sbjct: 29 LGYKQSQKMIRQGKAKLVILANNCPALRKSEIEYYAMLSKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 HSP 2 Score: 40.4318 bits (93), Expect = 4.420e-32 Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = -1 Query: 445 MVLSKKTKRILEGFNNRLVFVMKSGKFIFG 534 MV +KKTK+ LE N+RL VMKSGK++ G Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLG 30
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.077e-31 Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = -2 Query: 201 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLPGD 449 LGYKTV R K KL+I++NN PPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGD DIIK+ PG+ Sbjct: 29 LGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.094e-28 Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = -2 Query: 213 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKS 449 LGYKTV R+ GKLIIL+NN PPLRKSEIE YAMLAK+ VHH++GNNVDLGTACGKY+RV CLSI+DPGD DII + Sbjct: 29 LGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDIIST 107
BLAST of DY271148 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.696e-27 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = -2 Query: 207 LGYKTVF*FFRTFKGKLIILSNNRPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVFCLSIIDPGDFDIIKSLP 449 LGYK R K KL+IL+NN P LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGD DII+S+P Sbjct: 29 LGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 The following BLAST results are available for this feature:
BLAST of DY271148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271148 ID=DY271148; Name=DY271148; organism=Citrus clementina; type=EST; length=591bpback to top |