DY271174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 6.532e-72 Identity = 115/134 (85.82%), Postives = 125/134 (93.28%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 402 G+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREPK SGP+P +L G LI+SM +DH+VSD GDVVYY+ DP+LNG Sbjct: 299 GIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKLNG 432
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 6.532e-72 Identity = 115/134 (85.82%), Postives = 125/134 (93.28%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 402 G+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV+GKYYREPKKSGP+P +L G L+RSM +DHYVSD GDVVYYQ DP+L+G Sbjct: 320 GIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSMKEDHYVSDTGDVVYYQKDPKLSG 453
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 8.532e-72 Identity = 120/138 (86.96%), Postives = 127/138 (92.03%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 414 G+PY VMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLGKYYREPKKS P+PF+L GDL RS+ +DHYVSD GDVVYYQTDPQL G+ KS Sbjct: 310 GIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSAPLPFHLLGDLTRSLKRDHYVSDVGDVVYYQTDPQLTGAEKS 447
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 3.584e-70 Identity = 117/138 (84.78%), Postives = 127/138 (92.03%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKS-GPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 411 G+PY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV GKYYREPKKS P+PF+L G++IRS DH+VSD GDVVYYQTD ++NGSSK Sbjct: 314 GVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPKKSAAPLPFHLIGEIIRSFKTDHFVSDTGDVVYYQTDSKINGSSK 451
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.841e-66 Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = 1 Query: 4 LPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 411 +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP+P +L G L +S+ +DH+VSD GDVVYY+ DP L G K Sbjct: 265 IPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNLYGEIK 400
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 4.101e-66 Identity = 110/137 (80.29%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 411 G+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP+P +L L +S+ +DHYVSD G+VVYY+ DP L G K Sbjct: 306 GIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.995e-66 Identity = 110/132 (83.33%), Postives = 121/132 (91.67%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 396 G PY IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL EAT+AA+PVLGKYYREPKKSGPIPF+L DL RSM +DHYVSD+G++V+YQTDP + Sbjct: 240 GAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSGEIVFYQTDPHI 371
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.922e-65 Identity = 107/137 (78.10%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 411 G+PYWIFVMWLD VTYLHHHGH KLPWYRGKEWSYLRGGLTT+DRDYGW NIHHDIGTHVIHHLFPQIPHYHL+EAT+AA+PVLG YYREP++S P+PF+L LI+SM +DH+VSD GDVVYYQTD L S + Sbjct: 243 GIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLLLHSQR 379
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.250e-64 Identity = 104/136 (76.47%), Postives = 124/136 (91.18%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 408 G+PY IFVMWLD VTYLHHHG+ KLPWYRG+EWSYLRGGLTT+DRDYGW NN+HHDIGTHVIHHLFPQIPHYHL+EAT++A+ VLGKYYREP+KSGP+PF+L L++S+S+DH+VSD GD+VYYQTDP+L+ S Sbjct: 240 GVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQDHFVSDTGDIVYYQTDPKLHQDS 375
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.613e-62 Identity = 103/132 (78.03%), Postives = 118/132 (89.39%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 396 G+PY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL++AT+AA+ VLG+YYREPK SG IP +L L+ S+ KDHYVSD GD+V+Y+TDP L Sbjct: 244 GVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDL 375 The following BLAST results are available for this feature:
BLAST of DY271174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271174 ID=DY271174; Name=DY271174; organism=Citrus clementina; type=EST; length=974bpback to top |