DY271176

Overview
NameDY271176
Unique NameDY271176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length998
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.663e-86
Identity = 164/238 (68.91%), Postives = 194/238 (81.51%), Query Frame = 3
Query:  249 MNQTEVPQMKAPLVPLATLIGRELRNEKIEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRK 962
            M+ ++  + +  LVPLATLIGRELR+EK+EKPFVKYGQAALAKKGEDYFLIK DC+R+PG+ S++FSVF IFDGHNG SAAI+TKE LL NV+SAIPQGASRDEWLQALPRALVAGFVKTDIEFQ+KGETSGTTVTFV+IDGWT+TVASVGDSRCILDTQGG+VSLLTVDH+  +   ++  ++ A GGE+GRLNV  G E           CLS+S G  + G+ ++ P P VKQ K
Sbjct:    1 MSVSKASRTQHSLVPLATLIGRELRSEKVEKPFVKYGQAALAKKGEDYFLIKTDCERVPGDPSSAFSVFGIFDGHNGNSAAIYTKEHLLENVVSAIPQGASRDEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVIIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERIT-ASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGE-FIVPIPHVKQVK 236          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C33_ORYSJ (Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica GN=Os03g0301700 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 7.745e-76
Identity = 144/233 (61.80%), Postives = 179/233 (76.82%), Query Frame = 3
Query:  279 APLVPLATLIGRELRNEKIEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            AP +PLATLIGRELR    E+P V+YG    AK+GEDYFL+KPDC R+PG+ S++FSVFA+FDGHNGVSAA+F+KE LL +V+SA+PQG  RD+WLQALPRALVAGFVKTDI+FQ+KGE SGTT T VV+DG+TVTVASVGDSRCILDTQGG++SLLTVDH+  +   ++  V+ A GGE+ RLN+  G+E           CLS+S G  + G+ ++ P P VKQ K S  G
Sbjct:   12 APSLPLATLIGRELRGGGSERPLVRYGHFGFAKRGEDYFLVKPDCLRVPGDPSSAFSVFAVFDGHNGVSAAVFSKEHLLEHVMSAVPQGIGRDDWLQALPRALVAGFVKTDIDFQRKGEASGTTATLVVVDGFTVTVASVGDSRCILDTQGGVISLLTVDHRLEENVEERERVT-ASGGEVSRLNLCGGQEVGPLRCWPGGLCLSRSIGDTDVGE-FIVPIPHVKQVKLSNAG 242          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana GN=At1g68410 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.578e-71
Identity = 138/231 (59.74%), Postives = 174/231 (75.32%), Query Frame = 3
Query:  285 LVPLATLIGRELRNEKIEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            LVPLA LI RE +  K+EKP V++GQAA ++KGEDY LIK D  R+P N+ST+FSVFA+FDGHNG +AA++T+E+LLN+V+SA+P G SRDEWL ALPRALV+GFVKTD EFQ +GETSGTT TFV++DGWTVTVA VGDSRCILDT+GG VS LTVDH+      ++  V+ A GGE+GRL+++ G E           CLS+S G  + G+ ++ P P VKQ K S  G
Sbjct:   18 LVPLAALISRETKAAKMEKPIVRFGQAAQSRKGEDYVLIKTDSLRVPSNSSTAFSVFAVFDGHNGKAAAVYTRENLLNHVISALPSGLSRDEWLHALPRALVSGFVKTDKEFQSRGETSGTTATFVIVDGWTVTVACVGDSRCILDTKGGSVSNLTVDHRLEDNTEERERVT-ASGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGE-FIVPVPFVKQVKLSNLG 246          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica GN=Os01g0513100 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 4.126e-61
Identity = 135/268 (50.37%), Postives = 173/268 (64.55%), Query Frame = 3
Query:  285 LVPLATLIGRELRNEKI---------------------------EKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTS----------FSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            LVPLA LI  E R E+                             +P ++YG AA +KKGED+FL++ DC R   ++S+S          F+VFA+ DGHNG +AAI+T+++LLN+VLSA+P+G SR+EWL ALPRALVAGFVKTD EFQ KG+TSGTT TFV+IDGWT+TVASVGDSRCILD QGG VSLLTVDH+  +   ++  V+ A GGE+GRL+V+ G E           CLS+S G  + G+ ++ P P VKQ K S  G
Sbjct:   32 LVPLAALIKEEARAERPMGSGSRICARDEEDGGGGGGAEGGRRWRRPLLRYGCAAQSKKGEDFFLLRTDCARPSTSSSSSSSLASSPPHTFAVFAVLDGHNGNAAAIYTRDNLLNHVLSAMPRGLSREEWLHALPRALVAGFVKTDKEFQHKGQTSGTTATFVIIDGWTITVASVGDSRCILDAQGGAVSLLTVDHRLEENVEERERVT-ASGGEVGRLSVVGGAEIGPLRCWPGGLCLSRSIGDIDVGE-FIVPVPYVKQVKLSNAG 297          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana GN=At1g47380 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 4.562e-60
Identity = 124/230 (53.91%), Postives = 161/230 (70.00%), Query Frame = 3
Query:  288 VPLATLIGRELRNEKIEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            VPL+ L+ RE  NEKI+ P + +GQ   +KKGED+ L+K +CQR+ G+  T+FSVF +FDGHNG +AAI+TKE+LLNNVL+AIP   +RDEW+ ALPRALVAGFVKTD +FQ++  TSGTTVTFV+++GW V+VASVGDSRCIL+   G V  L+ DH+      ++  V+ A GGE+GRLN   G E           CLS+S G  + G+ Y+ P P VKQ K S  G
Sbjct:   10 VPLSVLLKRESANEKIDNPELIHGQHNQSKKGEDFTLVKTECQRVMGDGVTTFSVFGLFDGHNGSAAAIYTKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQERARTSGTTVTFVIVEGWVVSVASVGDSRCILEPAEGGVYYLSADHRLEINEEERDRVT-ASGGEVGRLNTGGGTEIGPLRCWPGGLCLSRSIGDLDVGE-YIVPVPYVKQVKLSSAG 237          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C15_ORYSJ (Probable protein phosphatase 2C 15 OS=Oryza sativa subsp. japonica GN=Os02g0567200 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.816e-56
Identity = 120/235 (51.06%), Postives = 160/235 (68.09%), Query Frame = 3
Query:  279 APLVPLATLIGRELRNEKI--EKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            A  VPLA L+ RE+ +EK   E+P ++ G  + AKKGEDY  +KPDC+R+PG  S+SFS F +FDGHNG  AAI+TKE+LL+N+L+AIP   +R++WL ALPRA+VA FVKTD +FQ K  +SGTTVTFV+IDG  +TVASVGDSRC+L+ +G I   L+ DH+      +   V+   GG++GRLNV+ G E           CLS+S G  + G+ ++ P P VKQ K S  G
Sbjct:   16 AATVPLAVLLRREVVSEKTAAERPELQVGLFSQAKKGEDYTFLKPDCERLPGVPSSSFSAFGLFDGHNGNGAAIYTKENLLSNILTAIPADLNREDWLAALPRAMVAAFVKTDKDFQTKARSSGTTVTFVIIDGLFITVASVGDSRCVLEAEGSIYH-LSADHRFDASKEEVDRVT-ESGGDVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGQ-FIVPVPYVKQVKLSTAG 247          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C69_ORYSJ (Probable protein phosphatase 2C 69 OS=Oryza sativa subsp. japonica GN=Os09g0459600 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.193e-54
Identity = 120/234 (51.28%), Postives = 158/234 (67.52%), Query Frame = 3
Query:  279 APLVPLATLIGRELRNEKIEKPFVKYGQAALAKKGEDYFLIKPDC-QRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            A  VPL  L+ RE+ +E++E+P V  G+AA ++KGED+ L+  +  +R+ G+ STSFSVFA+FDGHNG  AA++ K++LLNN+L AIP G SRDEWL  LPRALVA FVKTD +FQ   ETSGTTVTFVVID W VTVASVGDSRCIL++  G +  L+ DH+      +   V+ A G ++G+LN++ G E           CLS+S G  + G+  + P P VKQ K S  G
Sbjct:    7 AVTVPLGVLLRREVTSERMERPDVLCGEAARSRKGEDFTLLLAEAGERVAGDPSTSFSVFALFDGHNGSGAAMYAKKNLLNNLLRAIPSGLSRDEWLAVLPRALVAAFVKTDKDFQAVAETSGTTVTFVVIDEWVVTVASVGDSRCILESADGSLYHLSADHRFDSNQDEVQRVT-ACGSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMDVGEC-IIPVPHVKQVKLSNAG 238          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C40_ORYSJ (Probable protein phosphatase 2C 40 OS=Oryza sativa subsp. japonica GN=Os04g0449400 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.737e-51
Identity = 111/217 (51.15%), Postives = 145/217 (66.82%), Query Frame = 3
Query:  327 EKIEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAGGGEIGRLNVLVGKEXXXXXXXXXXXCLSKSNG*PEGGKIYLFPFPLVKQRKPSQWG 977
            E+  +P V  GQA  AKKGED+ L+KP C+R+P   +  FS FA+FDGHNG  AA++ KE++L+NV+  +P   S DEWL ALPRALVAGFVKTD +FQ +  +SGTTVTFV+IDG+ VTVASVGDSRC+L+ +G I   L+ DH+      + G V+   GGE+GRLNV+ G E           CLS+S G  + G+ ++ P P VKQ K S  G
Sbjct:   53 ERERRPSVAAGQACRAKKGEDFALLKPACERLPAGGAP-FSAFALFDGHNGSGAAVYAKENILSNVMCCVPADLSGDEWLAALPRALVAGFVKTDKDFQTRAHSSGTTVTFVIIDGYVVTVASVGDSRCVLEAEGTIYH-LSADHRFDASEEEVGRVTEC-GGEVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGE-FIIPVPYVKQIKLSSAG 265          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.542e-12
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 3
Query:  357 GQAALAKKGEDYFLIKPDCQRIP----GNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKEC*KKGSVSLAG 809
            G   +++ G+  F+   D  RI     GN+  SF  F ++DGH G  AA F  E+L   V+  +     ++E ++A      A F++TD +F +KG  SG      VI    + V+++GD R +L  + G+   LT DHKPG++  K+   S  G
Sbjct:  120 GFGVVSRNGKKKFM--EDTHRIVPCLVGNSKKSF--FGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKEEKVEAFK----AAFLRTDRDFLEKGVVSGACCVTAVIQDQEMIVSNLGDCRAVL-CRAGVAEALTDDHKPGRDDEKERIESQGG 265          
BLAST of DY271176 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.030e-11
Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  384 EDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDI----EFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHKPGKE 776
            EDY  +  + +++ G+      +FAIFDGH G   A + + +L +N+L        +D W      A+   ++ TD     +  K G+   T VT ++IDG T+ +A+VGDSR ++ ++ G+ S L+VDH+P KE
Sbjct:   46 EDY--VVSEFKKVDGH---DLGLFAIFDGHLGHDVAKYLQTNLFDNILK------EKDFWTDT-KNAIRNAYISTDAVILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRAVM-SKNGVASQLSVDHEPSKE 167          
The following BLAST results are available for this feature:
BLAST of DY271176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
P2C05_ARATH1.663e-8668.91Probable protein phosphatase 2C 5 OS=Arabidopsis t... [more]
P2C33_ORYSJ7.745e-7661.80Probable protein phosphatase 2C 33 OS=Oryza sativa... [more]
P2C15_ARATH2.578e-7159.74Probable protein phosphatase 2C 15 OS=Arabidopsis ... [more]
P2C03_ORYSJ4.126e-6150.37Probable protein phosphatase 2C 3 OS=Oryza sativa ... [more]
P2C12_ARATH4.562e-6053.91Probable protein phosphatase 2C 12 OS=Arabidopsis ... [more]
P2C15_ORYSJ6.816e-5651.06Probable protein phosphatase 2C 15 OS=Oryza sativa... [more]
P2C69_ORYSJ2.193e-5451.28Probable protein phosphatase 2C 69 OS=Oryza sativa... [more]
P2C40_ORYSJ1.737e-5151.15Probable protein phosphatase 2C 40 OS=Oryza sativa... [more]
P2C14_ARATH3.542e-1232.26Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C20_ARATH1.030e-1133.33Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271176 ID=DY271176; Name=DY271176; organism=Citrus clementina; type=EST; length=998bp
TCTCTCTCTGGATTTCTCCCACCAATCAAATCACGCCACAGTTACCCTGG
TTACTCTTTCTCTCACTAAAAAGTTCACTTTCTTTCTCTTAGGGTTTTAT
TTTGGTGCAAAAATTGTGTATGAAGTGACGTTTTGGGGGCAAATGAGGAG
AGTTTTGTAGACTGAATGCTCAATGTACACTTCTCACTTCTTGATCTGTT
GATGGTGTTCTGAGAAAACGACTTGGAGATGTTGAAAATTAAACAAGCAT
GAACCAGACTGAAGTACCCCAGATGAAGGCTCCTCTTGTTCCGCTTGCAA
CTTTGATCGGTCGTGAGCTGAGGAACGAAAAGATTGAGAAACCTTTTGTG
AAGTATGGACAGGCTGCATTAGCTAAGAAAGGAGAGGATTACTTTCTGAT
AAAACCTGATTGCCAGAGGATTCCTGGAAATGCATCAACGTCATTTTCTG
TTTTTGCGATTTTTGATGGGCACAATGGTGTATCAGCTGCCATCTTTACA
AAGGAGAGCTTATTGAATAATGTCTTGAGTGCAATCCCTCAAGGCGCTAG
TAGGGATGAGTGGCTTCAAGCACTTCCTCGGGCACTTGTCGCAGGTTTTG
TGAAAACTGACATAGAATTTCAAAAAAAAGGTGAAACTTCTGGGACAACA
GTGACATTTGTTGTGATAGATGGATGGACTGTGACTGTTGCATCTGTTGG
TGATTCTCGATGCATATTGGACACCCAGGGAGGCATTGTTTCACTGTTGA
CTGTTGATCACAAGCCTGGAAAAGAATGCTGAAAAAAAGGGAGCGTGTCC
CTGGCAGGTGGAGGTGAAATAGGAAGGCTCAATGTTTTGGTTGGCAAGGA
GGGCGGTCCCCTTCGCGGCCGGCCTGGGGGGTTATGCCTTTCCAAGTCGA
ATGGGTGACCCGAAGGGGGGAAAATTTATTTGTTCCCATTCCCCCTGGTT
AAACAAAGGAAACCTTCTCAATGGGGGGAGAAAAATTTAAAAACTCCC
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