DY271178

Overview
NameDY271178
Unique NameDY271178
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.038e-33
Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 3
Query:   12 KKMVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAEC--LENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRW 668
            K  + W +G+ IGRG+FGTV + ++  +G++ AVK V    + C      QA    LE E+++L++LS P IV+YLG               N+ LE++PGG++S L     A+ + + +R++T  ++  L+YLH+  I+H D+KG N+LV  N   +KLADFGA+ +    AT+S  + +K    G+P WMAPEV+ +      +D+WS+GCT IE   GK  W
Sbjct:   63 KPPIRWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQV-LITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGT-------VREDETLNILLEFVPGGSISSLLEKFGAFPESV-VRTYTNQLLLGLEYLHNHAIMHRDIKGANILVD-NQGCIKLADFGASKQVAELATISGAKSMK----GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPW 273          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 6.728e-33
Identity = 88/278 (31.65%), Postives = 147/278 (52.88%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKS---VDRNAALCHHMPAIQAECLE--NEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFR--ANTLNPTRFPQYLPRFPIQPSNSCWIFLKIV*KRDRGRPGNWNTPPKLPFL 833
            + W +G+ +GRG +G+V + +++  G++FAVK    VD N+      P ++   L    EI ++RSL    IV+YLG  +         S  ++ LEY+PGG++S L     A+++ + ++ +T  I+  L +LH+ +I+H D+KG N+L+      VKL+DFG +   +   ++   +Q  G+P WMAPEV+++   G  SD+WSLGC  +E    +P W +    A  +        +P  P   S   + FL +  KRD     + N   K PF+
Sbjct:  168 IKWQKGQILGRGGYGSVYLGLNKDTGELFAVKQLEIVDINSD-----PKLKNMILSFSKEIEVMRSLRHDNIVRYLGTSLD-------QSFLSVFLEYIPGGSISSLLGKFGAFSENV-IKVYTKQILQGLSFLHANSIIHRDIKGANILID-TKGIVKLSDFGCSKSFSGIVSQFKSMQ--GTPYWMAPEVIKQTGHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIASSNSIPNIPSHMSQEAFDFLNLCFKRDPKERPDANQLLKHPFI 429          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.499e-32
Identity = 82/218 (37.61%), Postives = 126/218 (57.80%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAEC--LENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRW 668
            +SW +G+ IGRG+FGTV + ++  +G++ AVK V   AA        QA    LE E+++L++LS P IV+YLG               N+ LE++PGG++S L      + + + +R++T  ++  L+YLH+  I+H D+KG N+LV  N   +KLADFGA+ +     T       +G+P WMAPEV+ +      +D+WS+GCT IE   GK  W
Sbjct:   67 ISWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQV-LIAANFASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGT-------VREDDTLNILLEFVPGGSISSLLEKFGPFPESV-VRTYTRQLLLGLEYLHNHAIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATMTGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPW 274          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.269e-31
Identity = 91/262 (34.73%), Postives = 140/262 (53.44%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSV---------DRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFPIQPSNSCWIFLK 767
            + W+RG  IG GSFG V + ++  +G++ AVK V         DR+A L         + L  EI +L+ LS  +IV+YLG +++       S   N+ LEY+PGG+V+ L T   ++ +E  +++     +  L+YLHSR IVH D+KG N+LV  N   +K++DFG + +    +T + T G +   +GS  WMAPEVV++     ++D+WSLGC  IE    K  + +              LP FP   S+S   FL+
Sbjct:  392 IKWIRGALIGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKLL--------DALAGEIALLQELSHEHIVQYLGSNLN-------SDHLNIFLEYVPGGSVAGLLTMYGSF-EETLVKNFIKQTLKGLEYLHSRGIVHRDIKGANILVD-NKGKIKISDFGISKKLELNSTSTKTGGARPSFQGSSFWMAPEVVKQTMHTEKTDIWSLGCLVIEMLTSKHPYPNCDQMQAIFRIGENILPEFPSNISSSAIDFLE 636          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.403e-30
Identity = 76/223 (34.08%), Postives = 128/223 (57.40%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSV-DRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWED 674
            + W +G+ IG G+FG V + ++  +G++ A+K V    ++            LE E+++L++LS P IV+YLG           S   N+ +E++PGG++S L     ++ + + +  +T  ++  L+YLH+  I+H D+KG N+LV  N   ++LADFGA+ +    ATV+  + +K    G+P WMAPEV+ +      +D+WS+GCT IE   GKP W +
Sbjct:   66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGT-------VRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIM-YTKQLLLGLEYLHNNGIMHRDIKGANILVD-NKGCIRLADFGASKKVVELATVNGAKSMK----GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSE 275          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.894e-29
Identity = 80/222 (36.04%), Postives = 117/222 (52.70%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRA 683
            ++W RGK +G+G+FG V +  D   G   A K V  +         + A  LE EI++L++L    IV+Y G          +     + +EY+PGG+V D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L   ++  VKL DFGA+         G  I+   G+P WM+PEV+  E  G ++DVWSLGCT +E    KP W ++ A
Sbjct:  360 INWRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSA--LECEIQLLKNLQHERIVQYYGC-----LRDRAEKILTIFMEYMPGGSVKDQLKAYGALTESVT-RKYTRQILEGMSYLHSNMIVHRDIKGANIL-RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA 572          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.313e-28
Identity = 80/222 (36.04%), Postives = 118/222 (53.15%), Query Frame = 3
Query:   21 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRA 683
            ++W RGK +G+G+FG V +  D   G   A K V  +         + A  LE EI++L++L    IV+Y G        T +     + +EY+PGG+V D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L   ++  VKL DFGA+         G  ++   G+P WM+PEV+  E  G ++DVWSLGCT +E    KP W ++ A
Sbjct:  360 INWRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSA--LECEIQLLKNLQHERIVQYYGCLRDRAEKTLT-----IFMEYMPGGSVKDQLKAYGALTESVT-RKYTRQILEGMSYLHSNMIVHRDIKGANIL-RDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA 572          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K2_HUMAN (Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.476e-27
Identity = 78/221 (35.29%), Postives = 116/221 (52.49%), Query Frame = 3
Query:   24 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRA 683
            +W  GK +G+G+FG V +  D   G   AVK V  +         + A  LE EI++L++L    IV+Y G     +  T S     + +EY+PGG++ D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L     + VKL DFGA+         G  ++   G+P WM+PEV+  E  G ++D+WS+ CT +E    KP W +F A
Sbjct:  355 NWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNA--LECEIQLLKNLLHERIVQYYGCLRDPQEKTLS-----IFMEYMPGGSIKDQLKAYGALTENVT-RKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGN-VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVACTVVEMLTEKPPWAEFEA 566          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K1_HUMAN (Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4)

HSP 1 Score: 120.939 bits (302), Expect = 1.229e-26
Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPR--GSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRW 668
            W++G+ IG G+F +   A D   G + AVK V            +  E L  EIR++  L+ P I++ LG        T   S  NL +E++ GG+V+ L +   A+ + + + ++T  ++  L YLH   I+H DVKG N+L+      +++ADFGAA       T   + Q +  G+  +MAPEV+R +  G   DVWS+GC  IE    KP W
Sbjct: 1243 WLKGQQIGLGAFSSCYQAQDVGTGTLMAVKQVTYVRNTSSEQEEV-VEALREEIRMMSHLNHPNIIRMLG-------ATCEKSNYNLFIEWMAGGSVAHLLSKYGAFKESVVI-NYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLASKGTGAGEFQGQLLGTIAFMAPEVLRGQQYGRSCDVWSVGCAIIEMACAKPPW 1449          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K2_MOUSE (Mitogen-activated protein kinase kinase kinase 2 OS=Mus musculus GN=Map3k2 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.605e-26
Identity = 77/221 (34.84%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRA 683
            +W  GK +G+G+FG V +  D   G   AVK V  N         + A  LE EI++L++L    IV+Y G     +  T S     + +E  PGG++ D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L     + +KL DFGA+         G  ++   G+P WM+PEV+  E  G ++D+WS+ CT +E    KP W +F A
Sbjct:  355 NWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFNPESPETSKEVNA--LECEIQLLKNLLHERIVQYYGCLRDPQEKTLS-----IFMELSPGGSIKDQLKAYGALTENVT-RKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGN-IKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVACTVVEMLTEKPPWAEFEA 566          
The following BLAST results are available for this feature:
BLAST of DY271178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K2_ARATH1.038e-3337.78Mitogen-activated protein kinase kinase kinase 2 O... [more]
MKKA_DICDI6.728e-3331.65Mitogen-activated protein kinase kinase kinase A O... [more]
ANP1_ARATH1.499e-3237.61Mitogen-activated protein kinase kinase kinase ANP... [more]
BYR2_SCHPO1.269e-3134.73Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]
M3K3_ARATH1.403e-3034.08Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_MOUSE5.894e-2936.04Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_HUMAN1.313e-2836.04Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_HUMAN2.476e-2735.29Mitogen-activated protein kinase kinase kinase 2 O... [more]
M3K1_HUMAN1.229e-2633.80Mitogen-activated protein kinase kinase kinase 1 O... [more]
M3K2_MOUSE1.605e-2634.84Mitogen-activated protein kinase kinase kinase 2 O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271178 ID=DY271178; Name=DY271178; organism=Citrus clementina; type=EST; length=1058bp
GCATTTATTAAAAAAAAATGGTTTCTTGGGTGAGAGGCAAGTGCATAGGC
AGAGGCTCCTTTGGAACCGTCAACGTGGCCGTCGACAGATTCAACGGCGA
CGTTTTTGCGGTGAAATCAGTTGATCGAAACGCCGCGTTGTGTCACCATA
TGCCAGCAATTCAAGCCGAGTGTTTAGAAAACGAAATCAGAATTCTCCGC
TCACTCTCCTCCCCTTACATTGTCAAGTACCTCGGCGACGACGTGTCATA
CGAGGCCCCCACGACGTCGTCCTCGTGCCGGAACCTCCACCTAGAGTACT
TGCCAGGCGGCACCGTCTCCGACCTGGCAACAACTCTTAATGCTTACGCG
GACGAGATCACCTTGCGTTCACACACGTACTGTATTGTCTCTGCGTTGAA
GTACTTGCATTCTAGGAACATCGTACACTGCGACGTCAAAGGCAAGAACG
TACTAGTGGGTCCCAATTCGAGTTTCGTTAAACTCGCCGATTTCGGCGCA
GCGGGTGAGGCGACGGTTTCTGACACACGGGGTGTCAAGATTCAGCCGCG
TGGAAGTCCTCTATGGATGGCGCCCGAGGTCGTACGAAGGGAGTGTCAGG
GACCGGAGAGTGATGTCTGGTCTTTGGGATGTACCAATATCGAGAAGGGT
TACGGAAAACCCCGCTGGGAAGATTTCCGTGCCAACACCCTGAATCCAAC
CCGATTCCCCCAATATTTGCCCCGGTTTCCCATTCAGCCTTCGAACTCGT
GCTGGATTTTCTTGAAAATTGTTTGAAAAAGGGACCGGGGGAGGCCGGGG
AACTGGAACACCCCCCCAAAACTTCCCTTTTTAACAATCGGGGTCCCCCA
ACGGAGGCAAAAAAGCCGCGGAACCCCCCCCCCGGGCGCTGCCCCGGGGC
CACATCCCAAATCCAGAAAAAAAGGGAACAATGGAATAACAATAAAAAGG
TCTTCCCCCAAGAAGAAAGGGAGGCAAAATTCGTCTGGTCATGGGGACGG
TTCTATGGCAACAAACAGGGCCTGGCCGGCCAACAAAAAGCGAATAAACA
GCACCGGG
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