DY271203

Overview
NameDY271203
Unique NameDY271203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.641e-69
Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAST 662
            AAD +MLQDVCVADL S +KVNGFPCK NF+  DF S  ++KP ATNN FGS VT ANV+ +PGLNTLGVSLARIDYAPGGINPPHTHPRA+E+VFV+EG+LDVGF TTANVLVSK I KGE FVFPRGLVHFQKNNG +PA+V++ FNSQL GTQ+I +TLF ++
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGAS 197          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.641e-69
Identity = 126/166 (75.90%), Postives = 143/166 (86.14%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAST 662
            AAD +MLQDVCVADL S +KVNGFPCK NF+  DF S  ++KP ATNN FGS VT ANV+ +PGLNTLGVSLARIDYAPGGINPPHTHPRA+E+VFV+EG+LDVGF TTANVLVSK I KGE FVFPRGLVHFQKNNG VPA+VI+ FNSQL GTQ+I +TLF ++
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGAS 197          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.132e-68
Identity = 124/167 (74.25%), Postives = 143/167 (85.63%), Query Frame = 3
Query:  159 TAAADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLF 653
            +++ADP+MLQD+CVADL S IK+NGFPCK  A  +  DFFS  LAKP  TNNTFG+ VT ANV TIPGLNTLGVSL+RIDYAPGG+NPPHTHPRATE+VFVLEG LDVGF TTAN L+S+S+KKG+ F FP+GLVHFQKNNG+VPASVIA FNSQL GTQ++  TLF
Sbjct:   20 SSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLF 186          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.183e-64
Identity = 124/168 (73.81%), Postives = 138/168 (82.14%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAST 662
            AAD + LQD+CVAD  S I VNGF CK  +N +  DFFS+ L K  ATNNTFGS VT ANVQ IPGLNTLGVS+ARIDYAPGG+NPPHTHPRATE+VFVLEGQLDVGF TT N L++K+I KGE FVFP+GLVHFQKNNG  PA+VIAGFNSQL GT NI LTLF +T
Sbjct:   20 AADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNAT 187          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.545e-64
Identity = 120/165 (72.73%), Postives = 136/165 (82.42%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAS 659
            A DP+MLQDVCVADL SP+K+NGFPCKAN +  DFF   L  P  TNN  GS VTAANVQ+ PG+NTLGVS+ARIDYAPGG NPPHTHPRATEI+FVLEG L+VGF TTAN L +K++  GE FVFPRGLVHFQ+N G+ PA+VIA FNSQLQGTQ IA TLFA+
Sbjct:   24 AGDPDMLQDVCVADLASPVKLNGFPCKANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAA 188          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.871e-64
Identity = 114/168 (67.86%), Postives = 141/168 (83.93%), Query Frame = 3
Query:  159 TAAADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAST 662
            + A DP++LQD+CVADLTS +KVNGF CKA  +E DF+   LA    TNNT+GS VT ANV+ +PGLNTLGVS++RIDYAPGG+NPPHTHPRATE+VFVL+G LDVGF TTAN L +K+I  G+ FVFPRGL+HFQKNNG+ PA+VI+ FNSQL GTQ++A+TLFA++
Sbjct:   23 STAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAAS 190          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.177e-62
Identity = 118/169 (69.82%), Postives = 136/169 (80.47%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNV-PASVIAGFNSQLQGTQNIALTLFAST 662
            A DP+ LQD+CVAD TS IKVNGF CK  +N +  DFF   + KPA  NNT GS VT ANV+ I GLNTLGVSLARIDYAPGG+NPPHTHPRATE++FVLEG+LDVGF TTAN L +K++KKGE FVFPRGL+H+QKNN    PASVI+ FNSQL GTQ+IA TLF +T
Sbjct:   21 AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTAT 189          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.935e-61
Identity = 114/167 (68.26%), Postives = 135/167 (80.84%), Query Frame = 3
Query:  165 AADPEMLQDVCVADLTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAS 659
            A DP+ LQD+CVAD +   K+NGFPCK   N +E DFF   ++KPA  N+T GS VT ANV+ IPGLNTL VSLARIDYAPGG+NPPHTHPRATE+V+VLEG+L+VGF TTAN L +K+IK GE FVFPRGLVHFQKNNG  PASV++ FNSQL GT ++A TLFA+
Sbjct:   22 AYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAA 188          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.267e-58
Identity = 112/170 (65.88%), Postives = 132/170 (77.65%), Query Frame = 3
Query:  165 AADPEMLQDVCVAD---LTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAS 659
            A DP+MLQDVCVAD   L  P+++NGFPCK   N +  DFF D L K   T N  GS VTAA+V+++PGLNT+GVS+ARIDYAP G+NPPHTHPRATEI+FV+EG LDVGF TTAN L ++++ KGE FVFPRGLVHFQKNNGN PA  IA  NSQL GTQ+IA  LF +
Sbjct:   22 AGDPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGA 191          
BLAST of DY271203 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55
Identity = 108/170 (63.53%), Postives = 129/170 (75.88%), Query Frame = 3
Query:  165 AADPEMLQDVCVAD---LTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAS 659
            A DP+MLQDVCVAD   L  P+++NG PCK   N +  DFF D L     T N  GS VTAA+V+ +PGLNT+GVS+ARIDYAP G++PPHTHPRATEI+FV EG LDVGF TTAN L ++++ KGE FVFPRGLVHFQ+N+GN  A  IA FNSQL GTQ+IA TLF +
Sbjct:   22 AGDPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGA 191          
The following BLAST results are available for this feature:
BLAST of DY271203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
NEC1_NICPL4.641e-6974.70Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
NEC1_NICLS4.641e-6975.90Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL21_ARATH5.132e-6874.25Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
RHRE_PEA1.183e-6473.81Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL11_ORYSJ1.545e-6472.73Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL52_ORYSJ5.871e-6467.86Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH7.177e-6269.82Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL22_ARATH7.935e-6168.26Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL13_ORYSJ1.267e-5865.88Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ2.236e-5563.53Putative germin-like protein 3-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271203 ID=DY271203; Name=DY271203; organism=Citrus clementina; type=EST; length=662bp
CTCTCTCTCTCTCTTTCTCCATCTCTATCTTTTCTTCTTTCTTTATCTTC
GCCTGCAGCAATAACAAGATCATAATTGAACTTACTTTTGTAACCATGGC
TGCTGCTGCTGCTGGTGCTTTGACACTTTTTGTTGTCACTGTTGCTGTGA
TCTTGAACACTGCTGCTGCTGATCCCGAAATGCTTCAAGATGTTTGTGTG
GCAGACCTCACTTCCCCTATTAAAGTCAATGGGTTCCCCTGCAAAGCAAA
CTTTTCAGAGATGGACTTTTTCTCAGACAAATTAGCAAAGCCAGCAGCCA
CAAACAACACGTTTGGTTCAACAGTAACAGCAGCCAATGTCCAAACAATC
CCAGGCCTAAATACTCTTGGTGTCTCACTCGCACGCATTGACTATGCCCC
CGGCGGCATAAACCCGCCGCACACGCACCCCCGTGCCACCGAGATCGTCT
TTGTCCTCGAGGGTCAACTCGACGTAGGCTTCTTCACTACTGCCAACGTT
TTGGTATCAAAATCCATCAAAAAGGGTGAAAACTTCGTGTTTCCAAGAGG
GTTGGTGCATTTCCAGAAGAACAATGGAAATGTCCCTGCTTCTGTTATTG
CTGGCTTTAATAGCCAGCTGCAGGGGACTCAAAACATTGCTCTTACATTG
TTTGCATCTACG
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