DY271213

Overview
NameDY271213
Unique NameDY271213
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length968
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_SCHPO (6-phosphogluconate dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe GN=SPBC660.16 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.034e-33
Identity = 74/138 (53.62%), Postives = 97/138 (70.29%), Query Frame = 1
Query:   94 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLM 507
            GL GLAVMGQNL LN A+KGF +  YNRTTS+VDE +  A +     + G H  E FV  ++KPRV I+LVKAG PVD  I+ L+  +EKGD I+DGGN  Y +T RR + +A+ G+L++ +GVSGGE GA++G  LM
Sbjct:   10 GLIGLAVMGQNLILNGADKGFTVCCYNRTTSRVDEFL--ANEAKGKSIVGAHSLEEFVSKLKKPRVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYGPSLM 145          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD2_BACSU (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4)

HSP 1 Score: 142.51 bits (358), Expect = 3.470e-33
Identity = 73/156 (46.79%), Postives = 108/156 (69.23%), Query Frame = 1
Query:   76 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEANHTQK 543
            M + +IG+ GLAVMG+NLALNI  +GF +SVYNR++SK +E ++ AK +    + G +  E FV S++ PR I+++VKAG+  D TI++L  ++EK D +IDGGN +Y++T+RR K +AE G+ ++ TGVSGGE GA  G  +M     EA+   K
Sbjct:    1 MSKQQIGVIGLAVMGKNLALNIESRGFSVSVYNRSSSKTEEFLQEAKGKN---VVGTYSIEEFVQSLETPRKILLMVKAGTATDATIQSLLPHLEKDDILIDGGNTYYKDTQRRNKELAESGIHFIGTGVSGGEEGALKGPSIMPGGQKEAHELVK 153          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia pneumoniae GN=gnd PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.731e-33
Identity = 70/150 (46.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:   79 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEA 528
            +QT IGL GLAVMG+NL LN+ + GF +SVYNRT  K  + ++  +   +  L GF   E FV+S+++PR I+++++AG PVDQ+I  L  ++E GD IIDGGN +++++ERR K + E G+L+L  G+SGGE GA+ G  +M   + EA
Sbjct:    1 MQTNIGLIGLAVMGKNLVLNMIDHGFSVSVYNRTPEKTRDFLK--EYPNHRELVGFESLEDFVNSLERPRKIMLMIQAGKPVDQSIHALLPFLEPGDVIIDGGNSYFKDSERRCKELQEKGILFLGVGISGGEEGARHGPSIMPGGNPEA 148          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLMU (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia muridarum GN=gnd PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.487e-31
Identity = 71/152 (46.71%), Postives = 105/152 (69.08%), Query Frame = 1
Query:   76 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEG-NLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEA 528
            M    IGL GLAVMG+NL LN+ + GF +SVYNR+  K +E +   K+ G N+ L GF   E FV S+++PR I++++KAG+PVD+ I +L  ++E+GD +IDGGN +Y ++ERR   + + G+L++  GVSGGE GA+ G  +M   +IEA
Sbjct:    1 MAPADIGLIGLAVMGKNLVLNMIDHGFAVSVYNRSPEKTEEFL---KEHGENISLQGFTAIEEFVQSLKRPRKIMIMIKAGAPVDEMISSLLPFLEEGDILIDGGNSYYLDSERRYIDLKKKGILFVGMGVSGGEEGARKGPSIMPGGNIEA 149          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD2_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Saccharomyces cerevisiae GN=GND2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.242e-31
Identity = 71/146 (48.63%), Postives = 97/146 (66.44%), Query Frame = 1
Query:   91 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEA 528
            +GL GLAVMGQNL LN A+ GF +  YNRT SKVD  +  A +     + G    E  V  ++KPR I++L+KAG+PVD  IK L  +++KGD IIDGGN  + +T RR + + + G+L++ +GVSGGE+GA+FG  LM   S EA
Sbjct:    8 LGLVGLAVMGQNLILNAADHGFTVVAYNRTQSKVDRFL--ANEAKGKSIIGATSIEDLVAKLKKPRKIMLLIKAGAPVDTLIKELVPHLDKGDIIIDGGNSHFPDTNRRYEELTKQGILFVGSGVSGGEDGARFGPSLMPGGSAEA 151          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEIN (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus influenzae GN=gnd PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.236e-31
Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 1
Query:   79 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEANHTQKQTF 552
            V+  IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE ++ A +  N+   G +  E     ++KPR ++++V+AG  VDQ I+ L  ++E+GD IIDGGN  Y +T RR KA+AE G+ ++ +GVSGGE GA+ G  +M   + EA    K  F
Sbjct:    3 VKGDIGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLQGAAKGTNI--IGAYSLEDLAAKLEKPRKVMLMVRAGDVVDQFIEALLPHLEEGDIIIDGGNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGNQEAWQYVKPIF 158          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_DICDI (6-phosphogluconate dehydrogenase, decarboxylating OS=Dictyostelium discoideum GN=gnd PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.750e-30
Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 1
Query:   91 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLM 507
            IGL GLAVMG+NL LN+  +GF  SVYNRTTSKVDE V+  + +G     G H  E+ V S++ PR ++++VKAG  VD  I+ L   +EKGD IIDGGN  Y +++RR K +   G+L++ TGVSGGE GA  G  +M
Sbjct:    8 IGLIGLAVMGENLVLNMESRGFTCSVYNRTTSKVDEFVQ-GRGKGK-KFIGCHSLETLVQSLKTPRRVMLMVKAGEVVDHFIQLLLPLLEKGDIIIDGGNSLYTDSDRRTKDLDAKGILFIGTGVSGGEEGALLGPSIM 144          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_CANAL (6-phosphogluconate dehydrogenase, decarboxylating OS=Candida albicans GN=DOR14 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.750e-30
Identity = 67/139 (48.20%), Postives = 97/139 (69.78%), Query Frame = 1
Query:   91 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLM 507
            IGL GLAVMGQNL LN+A+ G+ +  YNRTT+KVD  +E   +  ++   G H  +  V  +++PR I++LVKAG+PVD+ I  L  Y+E+GD IIDGGN  + ++ RR + +A+ G+L++ +GVSGGE GA+ G  LM
Sbjct:   31 IGLIGLAVMGQNLILNMADHGYTVVAYNRTTAKVDRFLENEAKGKSI--LGAHSIKELVDQLKRPRRIMLLVKAGAPVDEFINQLLPYLEEGDIIIDGGNSHFPDSNRRYEELAKKGILFVGSGVSGGEEGARTGPSLM 167          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLTR (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia trachomatis GN=gnd PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.690e-30
Identity = 66/148 (44.59%), Postives = 104/148 (70.27%), Query Frame = 1
Query:   85 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEA 528
            T IGL GLAVMG+NL LN+ + GF +SVYNR+ +K +E ++   + G L   GF   + FV S+++PR I++++KAG+PVD+ I +L  ++E+GD +IDGGN +Y ++E+R   + + G+L++  GVSGGE GA+ G  +M   +I+A
Sbjct:    5 TDIGLIGLAVMGKNLVLNMVDHGFSVSVYNRSPAKTEEFLKDHGESGALQ--GFTTIQEFVQSLKRPRKIMIMIKAGAPVDEMIASLLPFLEEGDILIDGGNSYYLDSEQRYVDLKKEGILFVGMGVSGGEEGARKGPSIMPGGNIDA 150          
BLAST of DY271213 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.000e-30
Identity = 69/151 (45.70%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   76 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLCGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLATGVSGGENGAQFGNPLMAEESIEA 528
            M Q   G+ G+AVMG+NLALN+  +G+ +++YNRTTSK +E V +  Q+ NL L      E FV S++KPR I+++V+AG+  D TIK+L   ++KGD +IDGGN  + +T RR   +A+ G+ ++ TGVSGGE GA  G  +M     EA
Sbjct:    1 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEE-VYKEHQDKNLVLT--KTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDKGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEA 148          
The following BLAST results are available for this feature:
BLAST of DY271213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_SCHPO2.034e-3353.626-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_BACSU3.470e-3346.796-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLPN7.731e-3346.676-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLMU2.487e-3146.716-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_YEAST4.242e-3148.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HAEIN7.236e-3146.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DICDI2.750e-3051.086-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CANAL2.750e-3048.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLTR4.690e-3044.596-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLA8.000e-3045.706-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271213 ID=DY271213; Name=DY271213; organism=Citrus clementina; type=EST; length=968bp
GATCCTCAAATTTCCTAAATTCATTTCATTTTCAAGCATTCTTCGCAAGG
TTGAATTTTTCTCAGGTGACTAAAGATGGTCCAGACAAGAATTGGCCTAG
CTGGCCTTGCTGTCATGGGTCAAAATCTTGCTCTCAACATTGCTGAGAAA
GGATTCCCAATTTCTGTTTACAATCGGACGACCTCTAAAGTTGACGAGAC
TGTTGAACGAGCCAAACAAGAAGGGAATCTGCCCTTATGTGGCTTCCATG
ATCCTGAATCCTTTGTTCATTCAATCCAGAAACCTCGTGTTATAATCATG
CTTGTAAAAGCTGGTTCTCCTGTTGATCAAACAATTAAAACATTATCTGT
TTACATGGAGAAAGGAGATTGTATCATTGATGGTGGTAATGAATGGTATG
AGAATACTGAGAGGAGACAGAAAGCCGTGGCTGAATTGGGTCTGCTTTAT
CTGGCAACGGGAGTTTCAGGTGGTGAAAACGGTGCCCAGTTTGGAAATCC
TTTAATGGCTGAAGAATCCATTGAGGCAAACCACACACAAAAACAAACCT
TTCCAACCCGGGCAACAAGAGACCGCACCAGCTCCCGACGATCTTCCATA
AGTCGAGAAAACGGATACCAAGACACCATAACTGCCCACAACCACGCGCC
TCCGGCGGGCCGACCCTACCTACCCAAAAAGATTGGTAACTTAATAATAA
AATTCTTGAAATAAACAGAAAACCCTAAATCCTAATATACAGACCCACCA
CCATTACATACCACCCATCACCTTACCAAGACGCTACGGATTCTATAATG
TCTTCTTCCCCCATCAGACAAGAAAATAAAAGAAAACTCCAAGTACCAAT
GGGCCAAATGTGTCACGCTTTCCTACAAAACCCATCGCCCCTACCATGCC
ACCCGCCCCACAGACCCTCCTCGTCGCCGACTCACGGATAACAGATTAAC
TTACACTTATAATTCCAT
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