DY271223

Overview
NameDY271223
Unique NameDY271223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1034
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNE7 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 2.753e-56
Identity = 115/211 (54.50%), Postives = 146/211 (69.19%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNK-GELLSFLIEITAXXXXXXXXXXXXY-LVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLI 627
            PSLMPGG+  AY+ +E I+  +AAQV D GPCVTY+G GGSG++VKM+HNGIEYGDMQLIAEAYD+LKSV  L+  EL  VF+ WNK  EL SFLIEITA              LV+ +LD  G KGTG+WTV+ A ++ VA PTI ++++AR LS +K ER  A+++      G +    + D++  ID VR ALY SKICSYAQGM L+
Sbjct:  139 PSLMPGGTQAAYEAVEPIVRSIAAQV-DDGPCVTYIGPGGSGHYVKMVHNGIEYGDMQLIAEAYDLLKSVAGLNASELHDVFAAWNKTPELDSFLIEITADIFTKVDDLGTGQPLVELILDAAGQKGTGRWTVETALEIGVAIPTIIAAVNARILSSIKAERQAASEILS----GPITEPFSGDRQAFIDSVRDALYCSKICSYAQGMALL 344          

HSP 2 Score: 29.261 bits (64), Expect = 2.753e-56
Identity = 26/90 (28.89%), Postives = 36/90 (40.00%), Query Frame = 2
Query:  671 ELTRIWKXXXXXXXXXXXPNKKGSEKNPNLAIFPGQPKFGKEI*KTKIRFGRKLAGLAYNFGDYTSRGCPPP-----LALFDQNRKKRAP 925
            EL RIWK             K+  + +P LA     P+F + I   ++ + R +A  A        RG P P     L  FD  R+ R P
Sbjct:  359 ELARIWKGGCIIRAGFLNKIKQAYDADPTLANLLLAPEFRQTILDRQLAWRRVIAIAA-------ERGIPVPAFSASLDYFDSYRRDRLP 441          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNY3 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechocystis sp. (strain PCC 6803) GN=gnd PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.498e-54
Identity = 115/220 (52.27%), Postives = 146/220 (66.36%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQV--PDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNK-GELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIEEG 651
            PSLMPGG+  AYK +E IL K+AAQV  PD+  CVT++G GG+G++VKM+HNGIEYGDMQLIAEAYD+LK+   LSNE+L +VF +WN+  EL SFLIEI+             +L+D +LD  G KGTG+WTV    +L V  PTI ++++AR +S LKEERV A     S  +       + D E  I  VR ALY SK+CSYAQGM LI   + E G
Sbjct:  146 PSLMPGGTPAAYKELEPILTKIAAQVEDPDNPACVTFIGPGGAGHYVKMVHNGIEYGDMQLIAEAYDILKNGLGLSNEQLHEVFGQWNQTDELNSFLIEISTDIFAKKDPETGGHLIDYILDAAGQKGTGRWTVMSGLELGVPIPTIYAAVNARVMSSLKEERVAA-----SGQLSGPSKTFSGDVEAWIPKVRDALYCSKMCSYAQGMALIAKASQEFG 360          

HSP 2 Score: 25.7942 bits (55), Expect = 2.498e-54
Identity = 15/50 (30.00%), Postives = 21/50 (42.00%), Query Frame = 2
Query:  650 GWDLKPWELTRIWKXXXXXXXXXXXPNKKGSEKNPNLAIFPGQPKFGKEI 799
            G+D+   E+ RIWK             KK  + NP L      P+F + I
Sbjct:  360 GYDVNLPEIARIWKGGCIIRAGFLDKIKKAFKDNPQLPNLLLAPEFKQSI 409          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD2_BACSU (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 5.113e-54
Identity = 113/215 (52.56%), Postives = 149/215 (69.30%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EA++ ++ IL  ++A+V D  PC TY+G  G+G++VKM+HNGIEYGDMQLI+E+Y +LK V  LS +EL +VF+EWNKGEL S+LIEITA             LVD +LDK G KGTGKWT Q A DL V  P I  S+ ARF+S +KEERV+A+ +     +  V    T +KE+LI+ VR+AL+ SKICSYAQG   ++A + E
Sbjct:  138 PSIMPGGQKEAHELVKPILEAISAKV-DGEPCTTYIGPDGAGHYVKMVHNGIEYGDMQLISESYFILKQVLGLSADELHEVFAEWNKGELDSYLIEITADIFTKKDEETGKPLVDVILDKAGQKGTGKWTSQSALDLGVPLPIITESVFARFISAMKEERVKASGLLSGPEVKPV----TENKEELIEAVRKALFMSKICSYAQGFAQMKAASEE 347          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLM (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gnd PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 6.678e-54
Identity = 109/216 (50.46%), Postives = 146/216 (67.59%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSG-PCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY  +  I  ++AA+ P  G PCV Y+G  G+G++VKM+HNGIEYGDMQLIAE+YD+LK +  LSN E+Q +F EWN+GEL S+LIEIT             Y+VDK+LDK G KGTGKWT + A DL V  P I  S+ AR++S  K+ERV+A+KV     +     + + DK+++I+ +R+ALY SKI SYAQG   +R  + E
Sbjct:  138 PSMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPAL-----DFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEE 348          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.678e-54
Identity = 110/216 (50.93%), Postives = 145/216 (67.13%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSG-PCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY  +  I  ++AA+ P  G PCV Y+G  G+G++VKM+HNGIEYGDMQLIAE+YD+LK V  LSN E+Q +F EWN+GEL S+LIEIT             Y+VDK+LDK G KGTGKWT + A DL V  P I  S+ AR++S  K+ERV+A+KV     +       + DK+++I+ +R+ALY SKI SYAQG   +R  + E
Sbjct:  138 PSMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRVLGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPAV-----NFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEE 348          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_ESCVU (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Escherichia vulneris GN=gnd PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.148e-52
Identity = 111/215 (51.63%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G++VKM+HNGIEYGDMQLIAEAY +LK    LSNEEL Q F+EWNKGEL S+LI+IT             YLVD +LD+   KGTGKWT Q + DL      I  S+ AR++S LKE+RV A+KV     +    ++   DK + I+ VR+ALY  KI SYAQG + +RA + E
Sbjct:  127 PSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNKGELSSYLIDIT-KDIFTKKDEEGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKEQRVAASKV-----LSGPQSQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEE 335          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.806e-52
Identity = 111/215 (51.63%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G++VKM+HNGIEYGDMQLIAEAY +LK    LSNEEL Q F+EWN GEL S+LI+IT             YLVD +LD+   KGTGKWT Q A DL      I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA + E
Sbjct:  127 PSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDIT-KDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKV-----LSGPQAQSAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEE 335          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIFL (6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri GN=gnd PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.664e-52
Identity = 111/215 (51.63%), Postives = 139/215 (64.65%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G++VKM+HNGIEYGDMQLIAEAY +LK    LSNEEL Q F+EWN GEL S+LI+IT             YLVD +LD+   KGTGKWT Q A DL      I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR ALY  KI SYAQG + +RA + E
Sbjct:  138 PSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDIT-KDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKV-----LSGPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEE 346          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.664e-52
Identity = 111/215 (51.63%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G++VKM+HNGIEYGDMQLIAEAY +LK    LSNEEL Q F+EWN GEL S+LI+IT             YLVD +LD+   KGTGKWT Q A DL      I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA + E
Sbjct:  127 PSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDIT-KDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKV-----LSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEE 335          
BLAST of DY271223 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.664e-52
Identity = 111/215 (51.63%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 PSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQQVFSEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKEKLIDDVRQALYASKICSYAQGMNLIRAKNIE 645
            PS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G++VKM+HNGIEYGDMQLIAEAY +LK    LSNEEL + F+EWNKGEL S+LI+IT             YLVD +LD+   KGTGKWT Q + DL      I  S+ AR++S LKE+RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA + E
Sbjct:  127 PSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAETFTEWNKGELNSYLIDIT-KDIFTKKDEEGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKEQRVAASKV-----LSGPKAQLAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDE 335          
The following BLAST results are available for this feature:
BLAST of DY271223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
6PGD_SYNE72.753e-5654.506-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNY32.498e-5452.276-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_BACSU5.113e-5452.566-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLM6.678e-5450.466-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLA6.678e-5450.936-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ESCVU2.148e-5251.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHISO2.806e-5251.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIFL3.664e-5251.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIDY3.664e-5251.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITDI3.664e-5251.636-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YE05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271223 ID=DY271223; Name=DY271223; organism=Citrus clementina; type=EST; length=1034bp
CCTTCTTTAATGCCTGGAGGTTCCTTTGAGGCCTACAAGCATATAGAAGA
TATTCTTCTTAAGGTGGCTGCTCAGGTTCCTGATAGCGGTCCTTGTGTTA
CTTATGTTGGTAAAGGAGGATCTGGAAACTTTGTTAAGATGATTCACAAT
GGTATTGAATATGGTGATATGCAGTTGATAGCAGAGGCTTATGATGTACT
GAAATCAGTTGGGAAGCTCTCAAATGAAGAGCTACAACAGGTTTTCTCCG
AATGGAACAAGGGGGAGCTCCTGAGCTTCTTGATTGAGATCACTGCAGAT
ATATTTGGAATTAAGGATGACAAAGGAGATGGGTACTTGGTAGACAAGGT
TTTAGATAAAACTGGCATGAAGGGTACTGGAAAGTGGACAGTCCAGCAAG
CAGCTGATTTGTCAGTTGCTGCCCCCACAATAGAATCATCCTTGGATGCC
AGGTTCCTAAGTGGTTTGAAGGAGGAAAGAGTTGAAGCTGCCAAAGTCTT
CAGATCAAGTGGCATTGGCGATGTCCTAGCTGAGCAAACTGTTGATAAGG
AAAAGTTGATTGATGACGTGAGACAAGCACTCTATGCATCCAAAATATGC
AGCTATGCCCAGGGAATGAACTTGATACGTGCAAAGAACATTGAAGAAGG
GGTGGGACTTGAAACCTTGGGAGCTGACTAGGATTTGGAAGGGGGGGTTG
CTTATTTCTGGCATATCTCTGGGACCGAATAAAAAAGGCTCAGAAAAAAA
CCCAAATTTGGCCATTTTTCCTGGTCAACCAAAGTTTGGCAAGGAAATTT
AAAAAACAAAAATCCGGTTTGGGCGTAAATTGGCCGGCCTGGCTTATAAT
TTCGGGGATTATACCTCCCGGGGTTGCCCCCCCCCCCTTGCTTTATTTGA
CCAAAACAGAAAAAAAAGGGCCCCCGCGCTATTTTGGTTCCGGGCCAAAA
AAATTTTTCTTGAGACCCCCCCCACTTGAAAGGGGTTTGAAAAACTGGGG
CCCCCCCCCCACTGGAAAGGTGTAAAAATTTTCA
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