DY271225

Overview
NameDY271225
Unique NameDY271225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1023
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271225 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.998e-35
Identity = 90/220 (40.91%), Postives = 121/220 (55.00%), Query Frame = 3 
Query:  174 CMLFGCILLDGSDAVSFSSKLVHRFSDEAKERWISKSGNVSVADSWPKKNSVEYLELLLSNDWKRQKTRVKXXXXXXXXXXXXXFPSEGSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLVPPRIWGIHCAG*KSE*V*SIFIXXXXXXXXXXXXXXVSF*LQKFEGTLPLYCRYSPENTSSSGYLVEHILHL 833
            C+LF  +  + + A  FSS+L+HRFSDE +    +     S +DS P K S+EY  LL  +D++RQ+  +               PSEGS+T   GN F WLHYTWIDIGTP+VSFLVALD GSNLLW+PC C+QCAPL+++YY+SL    +   + +   +     +F+                   +  +   P    Y   NTSSSG LVE ILHL
Sbjct:   11 CVLF--LATEETLASLFSSRLIHRFSDEGR----ASIKTPSSSDSLPNKQSLEYYRLLAESDFRRQRMNL-------GAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSFLVALDTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTS---KVFLCSHKLCDSASD-------CESPKEQCPYTVNYLSGNTSSSGLLVEDILHL 207
The following BLAST results are available for this feature:
BLAST of DY271225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASPL1_ARATH3.998e-3540.91Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YE11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271225 ID=DY271225; Name=DY271225; organism=Citrus clementina; type=EST; length=1023bp
CGCATCGCATTATTGGCAAAGTTGGCATTTAGGCTAGTGCGCACATTACA
ATACACACCGCCTGAGTGCACTTTAGGACTCTCTGCTCTATCAGCTTTCT
ACAAAACACAGCTCAGAGCTCACTCACTCAGGTCACTCTCCTTTCTGAAA
AAATGGTGAATCTTGTGGCGATTTGCATGTTGTTTGGTTGCATCCTGTTG
GACGGATCGGATGCGGTGTCGTTTTCGTCGAAGCTGGTGCATAGATTTTC
CGATGAAGCGAAGGAGAGGTGGATTTCGAAGAGTGGAAACGTGTCAGTTG
CTGATTCGTGGCCGAAGAAGAACAGCGTCGAGTACCTGGAGCTGCTTTTG
AGTAACGATTGGAAACGGCAAAAAACGAGAGTGAAGTTACAGAGTAATAA
TAACTCTTCGCGGAATCAATTGTTGTTTCCTTCTGAAGGAAGTCAAACTC
ATTTCTTCGGAAATCAGTTTTACTGGTTACATTACACGTGGATTGATATT
GGGACACCAAACGTTTCGTTTCTTGTAGCATTGGATGCTGGGAGCAATTT
GCTTTGGGTCCCATGCCAATGCATACAATGCGCTCCTTTGTCTGCCAGTT
ACTACACTTCTTTGGTGCCTCCTCGTATTTGGGGCATCCATTGTGCAGGA
TAGAAATCTGAGTGAGTATGATCCATCTTCATCGAGCAGCAGCAAGAATG
TCTCTTGCAGTCTTCCCTTATGCAAGTCTCGTTCTAGCTGCAAAAGTTTG
AAGGAACCCTGCCCTTATATTGCAGATATTCCCCAGAAAATACCTCGAGT
TCCGGTTATCTTGTTGAACACATTTTGCATTTGGCTTCTTTCCACAAACA
TGCACCCCCAAATTTCTGTGAAACATCAGTTCTTATAGGGTTTGGTTAGG
GGGTTTTTCCCCCCAAACTTGGTTACCTTGAAAATGGGAGAAAATCTCAA
AAACCAAGGGCCCGGGTTCAATAAAAGGAATAACTTGATATAAATCAAAC
CAACCTGGGAAAGGAAACAACAT
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