DY271233

Overview
NameDY271233
Unique NameDY271233
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1055
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.036e-54
Identity = 103/156 (66.03%), Postives = 125/156 (80.13%), Query Frame = 3
Query:   84 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L + VLN  D FVFP G+  FQ+NI KT A A + L++
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.036e-54
Identity = 103/156 (66.03%), Postives = 125/156 (80.13%), Query Frame = 3
Query:   84 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L + VLN  D FVFP G+  FQ+NI KT A A + L++
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.036e-54
Identity = 103/156 (66.03%), Postives = 125/156 (80.13%), Query Frame = 3
Query:   84 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L + VLN  D FVFP G+  FQ+NI KT A A + L++
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.616e-53
Identity = 101/156 (64.74%), Postives = 125/156 (80.13%), Query Frame = 3
Query:   84 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            YDPSPLQD CVAI++ K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L + VL   D FVFP G+  FQ+NI KT A A + L++
Sbjct:   23 YDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSS 178          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.828e-53
Identity = 101/155 (65.16%), Postives = 123/155 (79.35%), Query Frame = 3
Query:   87 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            DPSPLQD CVAI + K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L + VLN  D FVFP G+  FQ+NI KT A A + L++
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSS 178          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 9.941e-53
Identity = 103/178 (57.87%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   18 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L + VL+  D FVFP G+  FQ+N+ K  A A + L++
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.298e-52
Identity = 103/178 (57.87%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   18 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L + VL+  D FVFP G+  FQ+N+ K  A A + L++
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.893e-52
Identity = 104/178 (58.43%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   18 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            M+  Q LI FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L + VL+  D FVFP G+  FQ+NI K  A A + L++
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSS 177          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.436e-51
Identity = 101/162 (62.35%), Postives = 122/162 (75.31%), Query Frame = 3
Query:   84 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNTSIPSNI 569
            YDPSPLQD CVA+++   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EIL+V+EGTL VGFVTS+Q NN L S VL   D FVFP G+  FQ+N+ +TNA A + L +  P  I
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTI 185          
BLAST of DY271233 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 6.031e-50
Identity = 97/180 (53.89%), Postives = 123/180 (68.33%), Query Frame = 3
Query:   12 LSMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISNVLNNEDAFVFPTGLTQFQINI*KTNASAPSALNT 551
            +++K++ FL   ++           DPSPLQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EIL+V +GTL VGF++S+Q  N L +  LN  D FVFP GL  FQ N+  T A A +AL++
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSS 180          
The following BLAST results are available for this feature:
BLAST of DY271233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL119_ARATH4.036e-5466.03Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH4.036e-5466.03Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH4.036e-5466.03Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL113_ARATH2.616e-5364.74Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH5.828e-5365.16Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH9.941e-5357.87Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH1.298e-5257.87Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH2.893e-5258.43Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH1.436e-5162.35Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH6.031e-5053.89Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271233 ID=DY271233; Name=DY271233; organism=Citrus clementina; type=EST; length=1055bp
CCTGTTAATTACTTTCCATGAAGGCAATTCAATTTCTTATAGGTTTTGCT
GTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATGACCCTAGCCCTCT
TCAAGATATCTGTGTAGCCATCAATAACCCCAAGGATGGTGTGTTTGTGA
ATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTC
TTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGA
TGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTCAATACCCTTGGCA
TATCAGCATTCCGTATTGACTATGCGCCATATGGCCAAAGGCCACCTCAT
ATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGGAAGGAACTCTTCA
CGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTCATCTCAAATG
TTCTGAATAATGAAGATGCTTTTGTGTTTCCAACTGGTTTGACTCAATTC
CAAATCAACATTTGAAAAACAAATGCAAGTGCCCCATCTGCTCTAAATAC
CAGTATCCCCAGTAACATCACCACACCCCACACCCACCTCGGACCCCATC
CCCCATCCATTTTCCAATTCTCTGCCCTGACCTCCCTAATTCAACCCCAG
AACAATACAAAAATCTTAACCACCACTACACAACTGTGGAGATGCATATC
GCATCTAACAAACTACTGCAATCCTGATCATATATTACTTACATCATAAA
TACTACGTTTTCACAGACCTCTTTCACCGTCACTCTCGCTATCCCCACGC
CCCCACCTCTATTCCTCCCCTCCCACACGCCAGCCGGTCCCCAACCTCCT
TATCGCCCCCCACACAACACATTCCCCTAACCATCCTCCCACCTCTATAT
ACTTAACCCAGAAATGAAAAAAGCAACATAAAGAATCCAACCCCACTCAT
CCCACCCCATACTTCACCTAAAACTTCACTTTCCAGAACACCACGAACAA
CACAAAGACTTCACGCCTCACACCCATAACCCCACAAAACCAATTCCTAA
AAAAA
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