DY271245

Overview
NameDY271245
Unique NameDY271245
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length999
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271245 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 7.038e-61
Identity = 121/221 (54.75%), Postives = 153/221 (69.23%), Query Frame = 3
Query:   72 LCFFNFPITR-AASDSAYESFLQCLTQQTNSSEQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQESHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVRRWRPLERQRVRQPVEEN*DRPPTLSGAHNGDVRGRISDTKRRKRNLSGKKNGG 731
            L F + P++  + S+S Y SFL+C + +T S + QI++ V +QTN +++SVLRAYIRNARFN SSTLKPT+IITP  ESHVSAAV CSK + F LKIRSGGHDY+GLSYISD+PFFILDM N+R + VD+   SAW+ AGATLGE+YYRIW+KS++HG+PAGVCPTV     L        V +       +  A   DV GR+ D K    +L     GG
Sbjct:   19 LLFLSLPLSSFSQSNSVYNSFLKCFSDKTKSPQSQITDNVFSQTNPAFSSVLRAYIRNARFNTSSTLKPTIIITPRSESHVSAAVTCSKTLNFLLKIRSGGHDYDGLSYISDKPFFILDMSNIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRKAMGEDLFWAITGG 239          
BLAST of DY271245 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.071e-30
Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  192 TQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQESHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTV 569
            T TNS Y  +L A ++N  F   +  KP+ I+ P  +  +S+ V C  +  + +++RSGGH YEGLSY +D PF I+DM NL  I +DV  E+AWVE+GATLGELYY I Q +   G+ AG CPTV
Sbjct:   48 TDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTV 173          

HSP 2 Score: 27.7202 bits (60), Expect = 2.071e-30
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  562 PPSGVGGHLSGNGYGNLLKK 621
            P  G GGH+SG G+G + +K
Sbjct:  171 PTVGSGGHISGGGFGMMSRK 190          
BLAST of DY271245 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.950e-28
Identity = 54/124 (43.55%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  198 TNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQESHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTV 569
            ++S +   L   I+N  F  S   KP+ II P  +  +S  + C ++  + +++RSGGH YEGLSY SD PF ++D+ NL  + +D++ E+AWVE+G+TLGELYY I + S   G+ AG CPTV
Sbjct:   46 SDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTV 169          

HSP 2 Score: 28.4906 bits (62), Expect = 8.950e-28
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  562 PPSGVGGHLSGNGYGNLLKK 621
            P  G GGH+SG G+G + +K
Sbjct:  167 PTVGTGGHISGGGFGMMSRK 186          
The following BLAST results are available for this feature:
BLAST of DY271245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RETOL_ARATH7.038e-6154.75Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO2.071e-3048.41Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA8.950e-2843.55Reticuline oxidase OS=Eschscholzia californica GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YF12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271245 ID=DY271245; Name=DY271245; organism=Citrus clementina; type=EST; length=999bp
CACGAATGAAAATGATGAAAATATCAACACTCTGTTCAACTTCTTTTCGG
CTCTCAACGATTCTTCTAGTTCTTTGCTTTTTCAATTTCCCCATCACACG
GGCAGCTTCAGATTCGGCCTATGAATCTTTTCTACAATGCTTAACGCAGC
AAACGAACTCTTCAGAACAACAAATCTCAAACATTGTCGTCACTCAGACC
AATTCATCGTACGCATCAGTCTTGCGAGCGTACATCCGAAACGCCCGTTT
CAACCTTTCATCAACGCTGAAACCCACAGTCATCATAACCCCTCTGCAGG
AATCTCACGTTTCAGCGGCCGTGATTTGCTCCAAACAAGTTGGCTTCCAA
CTCAAAATCCGCAGCGGCGGCCATGACTACGAGGGCTTGTCCTACATCTC
CGACAGGCCCTTCTTTATCCTCGACATGTTCAATTTACGGTCGATTGATG
TTGATGTCAAAGACGAGTCCGCTTGGGTCGAAGCTGGCGCCACATTGGGT
GAACTTTACTACAGGATTTGGCAAAAAAGTAAACTGCACGGCTATCCTGC
CGGCGTCTGCCCCACCGTCCGGCGTTGGCGGCCACTTGAGCGGCAACGGG
TACGGCAACCTGTTGAAGAAAATTAGGATCGTCCCCCGACATTGTCGGGA
GCCCACAATGGGGACGTCCGGGGGAGGATCAGCGATACGAAACGACGCAA
AAGAAACCTTTCGGGAAAAAAAAACGGTGGCCAGCACATGCACGTGTTTC
GAAGGTTCAACAGATTAATCCAACCCCACTCGCCACTGTCATCCCTTTCA
AACGCAGGCGGACTCGCCGAGCCTTCCCGCCCCATTATGAACAACACAAC
GCTGACCTTCAAGCATACCACGCAACTAGTGCAACTTCAGAAGCTGAGCA
ATTATAATATTACCGACAGAAAGACAGGACTACAACATAAACCAAGATAT
CTCACTCCGCTAAAACACCCTTACAAACTATAAATTCACCCCCATCTCA
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