DY271249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 5.911e-90 Identity = 168/306 (54.90%), Postives = 213/306 (69.61%), Query Frame = 1 Query: 70 MATDTAVAEHRSSNNG--HGCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSKFNVKRKWEKPGHSPAFG*DFW-DXXXXXXXXXXXXXXXGFPQSFNL-HQSLKVFMEASCLLTLAEGEFKKKLILEKQAPNPWKKRSWLNPPKKKGFKVWP*TNTQVRFFKPKKDKGNRE 972 MAT+T V + +NG GCC G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I KTGL++PHTAHCLA+G+ILVSCLG+++GNA+GNGFLLLDS FN+K +WEKPGHSP +G DFW F + FNL H + ++ + + GE K+ + L P + R +P K GF ++ +RFFK + + E Sbjct: 1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWYQPRHKTMISTSWGAPKAFSKGFNLQHVADGLYGSHLHVYSWPGGEIKQLIDLGPTGLLPLEIRFLHDPSKDTGFVGSALSSNMIRFFKNSDETWSHE 306
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 4.265e-64 Identity = 113/188 (60.11%), Postives = 140/188 (74.47%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ PHT+HCL G+I++S LG+ GN +G GF+LLD + F VK WE G S FG DFW Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKGNWEVEGESAQFGYDFW 190
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 9.502e-64 Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C GPGYATPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+ R L+LPS++S RIY+VD PRAP LHKV+EP +I K L HT+HCLASG++++S LG+ GN +G GF+LLD + F VK WEKPG G DFW Sbjct: 5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKGTWEKPGGEAPMGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 1.241e-63 Identity = 109/187 (58.29%), Postives = 137/187 (73.26%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSKFNVKRKWEKPGHSPAFG*DFW 684 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++VS LG+ GN +G+ LL F VK WEKPG + G DFW Sbjct: 5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGSFVLLDGETFEVKGTWEKPGDAAPMGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 2.117e-63 Identity = 112/188 (59.57%), Postives = 141/188 (75.00%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRAP LHKV+EP DI K L++ HT+HCLASG++++S LG+ GN +G GF+LLD + F VK WE+PG + G DFW Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKGTWERPGGAAPLGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 3.611e-63 Identity = 108/187 (57.75%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSKFNVKRKWEKPGHSPAFG*DFW 684 C GPGY TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++V+ LG+ GN +G+ LL F VK WEKPG + G DFW Sbjct: 5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGSFVLLDGETFEVKGTWEKPGGASPMGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.611e-63 Identity = 113/188 (60.11%), Postives = 142/188 (75.53%), Query Frame = 1 Query: 127 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C K GPGY +PL+AM GPRE+L+Y+ C+Y TG E PDYLATVD +P S YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+ R L+LPSL+S R+Y+VD PRAP LHKVVEP +I K LSY HT+HCLASG++++S LG+ GN +G GF+LLD + F VK WE+PG + G DFW Sbjct: 5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKGTWEQPGGAAPMGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.372e-62 Identity = 128/285 (44.91%), Postives = 171/285 (60.00%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFWDXXXXXXXXXXXXXXXGFPQSFNLHQSLKVFMEASCLLTL-----AEGEFKKKLILEKQAPNPWKKRSWLNPPKKKGFKVWP*TNTQVRFFKPKKDK 960 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S R+Y+VD +PRAP LHK VEP ++ K GL+ HT+HCL G+I++S LG+ GN +G GF+LLD + F VK WE G + FG DFW G P++F L ++ + +L E + + L K P + R NP +G +++ RF+K K K Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKGNWEAEGETAQFGYDFW---YQPRHNVMISTEWGAPKAFALGFKMEDVLAGQYGHSLNVWDWTEHRLVQTIDLGKDGLIPLEIRFLHNPDADQGLVGCALSSSIFRFYKEKDGK 284
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 3.057e-62 Identity = 109/188 (57.98%), Postives = 139/188 (73.94%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C GPGY TPLDAM GPRE+++Y+ C+Y T +KPDYLATVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R L+LPSL+S RIY+VD +PRAP LHK VEP D+ K GL+ PHT+HCL SG I++S +G+ GN +G GF+LLD + F V WE+PG + FG DFW Sbjct: 5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGETFEVIGNWEQPGDAAPFGYDFW 191
BLAST of DY271249 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.588e-61 Identity = 109/188 (57.98%), Postives = 137/188 (72.87%), Query Frame = 1 Query: 124 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGNKDGNAEGNGFLLLDSK-FNVKRKWEKPGHSPAFG*DFW 684 C + GPGY TPLDAM GPRE++LY+ C+Y TG KPDYLATVD +P S YS+VIHRLP+P DELHHSGWN+CSSCYGD+S R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ HT+HCL G+I++S +G+ GN +G GF+LLD + F VK WE G + FG DFW Sbjct: 4 CGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCGLANLHTSHCLGCGEIMISSIGDPYGNGKG-GFVLLDGETFEVKGNWEAEGEAAPFGYDFW 190 The following BLAST results are available for this feature:
BLAST of DY271249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271249 ID=DY271249; Name=DY271249; organism=Citrus clementina; type=EST; length=1049bpback to top |