DY271254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G1_MOUSE (AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 2.309e-44 Identity = 93/245 (37.96%), Postives = 154/245 (62.86%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG------RRAGSLPATVSTSSGTSLNLPNGVAN 730 EL+ +L+ + EFK D + I EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E+PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G + PA + T S P AN Sbjct: 384 ELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPSEIVQTNGETEPAPLETKPPPSGPQPTSQAN 626
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G1_HUMAN (AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5) HSP 1 Score: 179.489 bits (454), Expect = 2.309e-44 Identity = 93/245 (37.96%), Postives = 154/245 (62.86%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG------RRAGSLPATVSTSSGTSLNLPNGVAN 730 EL+ +L+ + EFK D + I EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E+PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G + PA + T S P AN Sbjct: 384 ELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTNGETEPAPLETKPPPSGPQPTSQAN 626
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G1_PONAB (AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.144e-44 Identity = 93/245 (37.96%), Postives = 153/245 (62.45%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG------RRAGSLPATVSTSSGTSLNLPNGVAN 730 EL+ +L+ + EFK D + I EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G + PA + T S P AN Sbjct: 384 ELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEGPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTNGETEPAPLETKPPPSGPQPTSQAN 626
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G_DICDI (AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.509e-38 Identity = 81/215 (37.67%), Postives = 144/215 (66.98%), Query Frame = 2 Query: 5 LTIELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIED---PITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCS-ERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDE 637 L EL+++L I+D +FK +L AK+C + EK++P+K W ID +L+V+S AGNF+ DEV LI +IS+ +L Y V+ LY A++ I Q+ L +V +WCIGEYGD+LV + L ++ + V+E +D++++ +H ++ T+ ++ +L KLSSRF S +RI+ +I K ++ LELQQR+ E++++ + + ++++++RMP +++ Sbjct: 379 LVRELLNFLLIADAQFKSELVAKLCIVTEKYAPNKRWQIDTILRVMSIAGNFIPDEVPSNLIQLISSTPELSSYAVQKLYLALKQDITQQPLTQVGLWCIGEYGDLLVADKSQLPKDEDGLSLNVSEQAVIDIIDLIFRHATTTQATRQYSLTSLAKLSSRFSQSSLQRIKTMIDNYKQNINLELQQRACEYSTLFDFDK--KASILDRMPPIEK 591
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G2_MOUSE (AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.149e-35 Identity = 78/207 (37.68%), Postives = 127/207 (61.35%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLD 634 EL +LE + + D + I E+F+P K W+ID +L VL+ AG V+D+ L +I A +LH Y+VR LY A+ I Q+ LV+VA WCIGEYGD+L+ G +P V E D + ++E ++ H S T+ A+ AL+KLS+R + RIR ++ + LELQQR++E+N++ +K+ ++R+ ++E+MP+++ Sbjct: 385 ELQAFLESCPPDLRADCASGILLAAERFAPSKRWHIDTILHVLTTAGAHVRDDAVANLTQLIGEAEELHTYSVRRLYSALAEDISQQPLVQVAAWCIGEYGDLLLE--GNCEETEPFQVEEEDVLALLEKVLQSHMSLPATRGYAITALMKLSTRLRGDNNRIRQVVSIYGSCVDLELQQRAVEYNTLFQKYDHMRAAILEKMPLVE 589
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G2_HUMAN (AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35 Identity = 76/207 (36.71%), Postives = 127/207 (61.35%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLD 634 EL +LE + + D + I E+F+P K W+ID +L VL+ AG V+D+ L +I A +LH Y+VR LY A+ I Q+ LV+VA WCIGEYGD+L+ G +P+ V E + + ++E ++ H S T+ A+ AL+KLS+R + RIR ++ L +ELQQR++E++++ K+ ++R+ ++E+MP+++ Sbjct: 385 ELQAFLESCPPDLRADCASGILLAAERFAPTKRWHIDTILHVLTTAGTHVRDDAVANLTQLIGGAQELHAYSVRRLYNALAEDISQQPLVQVAAWCIGEYGDLLL--AGNCEEIEPLQVDEEEVLALLEKVLQSHMSLPATRGYALTALMKLSTRLCGDNNRIRQVVSIYGSCLDVELQQRAVEYDTLFRKYDHMRAAILEKMPLVE 589
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G1_USTMA (AP-1 complex subunit gamma-1 OS=Ustilago maydis GN=APL4 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 8.232e-34 Identity = 81/212 (38.21%), Postives = 125/212 (58.96%), Query Frame = 2 Query: 5 LTIELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITT---KAMAMVALLKLSSRFPSCSE--RIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMP 625 LT EL+ +LE++D EFK +T +IC EKF+P+K W+ID +L+VL AGN+V++E+ A I ++ + +L YTV+ L+ + QESL A+W IGE+GD+L+ G N ED V E DVV++ S + + +L KL +R S+ RI II + S+ +E+QQRS+EF +++ K +IR ++E MP Sbjct: 383 LTRELLSFLEVADNEFKLGMTTQICLAAEKFAPNKRWHIDTVLRVLKLAGNYVREEILSAFIRLVCHTPELQAYTVQKLFSGLHQDFSQESLTLAAVWVIGEFGDVLIQGG---NFEDEELVREVQPKDVVDLLSSVLDSPYVNGLIRQFVLTSLAKLHTRLSDASQQSRIEQIIASFETSVEVEIQQRSVEFATLL-KRSDIRQGVLESMP 590
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP1G1_SCHPO (AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe GN=apl4 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.837e-26 Identity = 74/211 (35.07%), Postives = 113/211 (53.55%), Query Frame = 2 Query: 14 ELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIED----PITVTESDAVDVVEIAIKH-HSSDITTKAMAMVALLKLSSRFPSCS--ERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMP 625 EL+ +L+ E +G I + F+P+K W+ D +L+V AGNFV + + +I++A +LH Y V LY A++ + QE+L A W IGEYG ML++ +N +D P +V+ESD VD++E +S + AL KLS+R S S RI II K + E+QQRS+EF+ I+ + T++E P Sbjct: 412 ELLSFLDNVSDELRGSTAQYITEVTNAFAPNKRWHFDTLLRVFKSAGNFVSESTLSTFLRLIASAPELHEYAVVKLYAALKEDVSQEALTLSAFWVIGEYGQMLLS--PTMNFDDDQTLPHSVSESDIVDIIEEVFNSVEASRYIIVQYGLFALTKLSARLGSSSTASRIDKIIYSYKRNKNTEVQQRSVEFHLIL-NDSKLSKTILEPTP 619
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP2A2_DICDI (AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.723e-24 Identity = 51/212 (24.06%), Postives = 118/212 (55.66%), Query Frame = 2 Query: 5 LTIELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEA 640 + EL+ YL+ +D + +L KI ++ EKF+ + WY+D +L++++ AG+FV D++W ++ +++N D+ Y ++ A+Q+ E+L++V + +GE+G ++ +N S V + K ++ TKA+ + K + FP +++ +++ Q++ + E+QQR+ E+ ++ ++++ T+++ +P +A Sbjct: 408 IVAELLSYLQTADYAIREELVIKIANLAEKFASNYSWYVDVILQLITTAGDFVSDDIWFRVVKIVTNHEDIQAYAASTVFNALQSRNCHETLIKVGGYILGEFGHLIADN-----------PQSSPLVQFNILHSKFNTCGAPTKALLLSTYAKFVNLFPELTQQTQEVFKQHQSYIDAEIQQRACEYLNLTSLNEDLMQTVLDVIPAFIDA 608
BLAST of DY271254 vs. ExPASy Swiss-Prot
Match: AP2A2_RAT (AP-2 complex subunit alpha-2 OS=Rattus norvegicus GN=Ap2a2 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 3.833e-23 Identity = 62/236 (26.27%), Postives = 121/236 (51.27%), Query Frame = 2 Query: 5 LTIELIDYLEISDQEFKGDLTAKICSMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNK--GSLVLELQQRSIEFNSI-VEKHQNIRSTLVERMPVLDEATFSGRRAGSLPATVSTSSGTS 703 + E++ YLE +D + ++ K+ + EK++ D WY+D +L ++ AG++V +EVW+ +I ++ N D+ GY + ++ A+Q E+LV+V + +GE+G+++ DP S + + K H + T+A+ + +K + FP I+D++ + + +ELQQR++E+ + +I +T++E MP E R S+ A + G S Sbjct: 404 IVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAG--------DP---RSSPLIQFNLLHSKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLSTVASTDILATVLEEMPPFPE------RESSILAKLKKKKGPS 622 The following BLAST results are available for this feature:
BLAST of DY271254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271254 ID=DY271254; Name=DY271254; organism=Citrus clementina; type=EST; length=902bpback to top |